| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78066704
Identifier: 78066704
GI number: 78066704
Start: 2291919
End: 2292545
Strand: Reverse
Name: 78066704
Synonym: Bcep18194_A5235
Alternate gene names: NA
Gene position: 2292545-2291919 (Counterclockwise)
Preceding gene: 78066705
Following gene: 78066703
Centisome position: 62.06
GC content: 66.51
Gene sequence:
>627_bases ATGACTCCGCGCGATTACGCCCTGCTCGCGCAGGAGGCGTATTCCGCCAAGCCGGACATCGGCAAGGCGGACAGCGCCTC GCGCGCCATCGTGCGCCAGACGGCAGCCGGCCTGGTCGTTGCCTTTCCGGGCACCGACAACCTCGACTGCGTCGCCACCG ATCTGTACGCCCATCCGATCGACGTGATCGGCATCGGGCACGTGCACCACGGGTTCTGGAAAGCATGGGGCGCAATCGCC GTCGACGTGCTCGCTGCGATCGACGGTCGGCCGGTGACGCTCGTCGGGCACTCGCTCGGCGCCGCGATCGCGATCATAGC CGCCGCGGCTATGGTGGTCGGCGGCAAGCCGCCAGCGGCCGTCTACGGCTTCGAGCCGCCAAGGGTGAGCACAAACGGGA GCGTGGCGGCGATGCTCGGGAAGGTGCCGCTGCATCTATTCAAGAACGGGAACGACATCGTTCCAGACTTGCCGCCCGAC TGGCATCACGCCGGCGCGATCCAGCCGATCGGCCATGCGGCCTTACCTTTCCCAAACGTGACCGATCATGCGATTGCGCG GGTGATTATGGCGCTCCCTGAAATCGAATCGCCGGCGAGCAGTGGGAGCGAGGCTACGATACGCTGA
Upstream 100 bases:
>100_bases CGAATCTGGTCGGCAGGTACGAGAGCGCACTGCAGGCAGCGAAGGCGGCTCCGGCCGCGCCGGCCGCCGTATCGACGCCG CTCGCGGGCGCCCCGCTGCA
Downstream 100 bases:
>100_bases CGGCAGCGAATCGCGTCATCGCGCCTTCGCAGGGAGTTGCGTTGGCCGTACGTGCCAACGCGCGAGGCCATCGCATTTGG AATATGTTGGGGCCCAACTC
Product: lipase, class 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTPRDYALLAQEAYSAKPDIGKADSASRAIVRQTAAGLVVAFPGTDNLDCVATDLYAHPIDVIGIGHVHHGFWKAWGAIA VDVLAAIDGRPVTLVGHSLGAAIAIIAAAAMVVGGKPPAAVYGFEPPRVSTNGSVAAMLGKVPLHLFKNGNDIVPDLPPD WHHAGAIQPIGHAALPFPNVTDHAIARVIMALPEIESPASSGSEATIR
Sequences:
>Translated_208_residues MTPRDYALLAQEAYSAKPDIGKADSASRAIVRQTAAGLVVAFPGTDNLDCVATDLYAHPIDVIGIGHVHHGFWKAWGAIA VDVLAAIDGRPVTLVGHSLGAAIAIIAAAAMVVGGKPPAAVYGFEPPRVSTNGSVAAMLGKVPLHLFKNGNDIVPDLPPD WHHAGAIQPIGHAALPFPNVTDHAIARVIMALPEIESPASSGSEATIR >Mature_207_residues TPRDYALLAQEAYSAKPDIGKADSASRAIVRQTAAGLVVAFPGTDNLDCVATDLYAHPIDVIGIGHVHHGFWKAWGAIAV DVLAAIDGRPVTLVGHSLGAAIAIIAAAAMVVGGKPPAAVYGFEPPRVSTNGSVAAMLGKVPLHLFKNGNDIVPDLPPDW HHAGAIQPIGHAALPFPNVTDHAIARVIMALPEIESPASSGSEATIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21457; Mature: 21326
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRDYALLAQEAYSAKPDIGKADSASRAIVRQTAAGLVVAFPGTDNLDCVATDLYAHPI CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEHHHHCCE DVIGIGHVHHGFWKAWGAIAVDVLAAIDGRPVTLVGHSLGAAIAIIAAAAMVVGGKPPAA EEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCE VYGFEPPRVSTNGSVAAMLGKVPLHLFKNGNDIVPDLPPDWHHAGAIQPIGHAALPFPNV EECCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDHAIARVIMALPEIESPASSGSEATIR HHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TPRDYALLAQEAYSAKPDIGKADSASRAIVRQTAAGLVVAFPGTDNLDCVATDLYAHPI CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEHHHHCCE DVIGIGHVHHGFWKAWGAIAVDVLAAIDGRPVTLVGHSLGAAIAIIAAAAMVVGGKPPAA EEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCE VYGFEPPRVSTNGSVAAMLGKVPLHLFKNGNDIVPDLPPDWHHAGAIQPIGHAALPFPNV EECCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDHAIARVIMALPEIESPASSGSEATIR HHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA