| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066638
Identifier: 78066638
GI number: 78066638
Start: 2217021
End: 2217647
Strand: Reverse
Name: 78066638
Synonym: Bcep18194_A5169
Alternate gene names: NA
Gene position: 2217647-2217021 (Counterclockwise)
Preceding gene: 78066639
Following gene: 78066637
Centisome position: 60.03
GC content: 59.97
Gene sequence:
>627_bases ATGTTCGGTCGATTCATGCCCACCGAGGGCAAGTTCTTTGAACTCTTCAATGCGCACGCGAAGTACATCGTTTCCGGTGG CCGCGAGCTCGAACTGCTGATCGACAATCTCGCCGACGCCGAGATTCACAAGCAAAACGTGCAAACCGCCGAGAAGGCCG CCGACAAGCTCACGCACGAAGCGATCGATCTGCTGCACAAGACTTTCATCACGCCGCTCGATCGCGACGAGATCCACAAG CTGATCACGACGATGGACGACATCCTCGACCTGATGGAGGACGTCGCGACGGCCGTGTCGCTGTACGACGTGCGTGCCGT CACGTCGGAAGCGAGCCAGCTCGCGCACATCGTCACGCAGTCGGCCCAGCACGTTCAGCAGGCCGTTGCGATGCTGTCCG ACATGAAGCAGTCGGCGCAGATCCTCAAGCAGTGCGAGGAGATCGACCGCTGGGAGTCGGAAGCCGATCGCGTGCTGCGC GCGGCGATGTCGAAGCTGTTCCGCGAGGAAGACGACGTGAAGACGCTCATCAAGCTGAAGGCGATCTACGAGCTGCTCGA AGAGATCACCGACAAGTGCGAGGACGTCGCGAACATCATCGAAGGCATCGTGCTGGAAAACGCCTGA
Upstream 100 bases:
>100_bases AATCCCGGCGCGCGCATGTGCGCGCGTCGCGGCACGACCGAATAACGGTACAATGTCGCCCGTTTTCGTGACAGTAGTTT GACAATCTCTCAGGAATCCC
Downstream 100 bases:
>100_bases GCGGACCACGATGCATTCGATACAACTCGCCCTATGGATGGTCGCGACGCTGGTGCTCGTCGCGCTCGTATTCGACTTCA TGAACGGCTTTCACGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MFGRFMPTEGKFFELFNAHAKYIVSGGRELELLIDNLADAEIHKQNVQTAEKAADKLTHEAIDLLHKTFITPLDRDEIHK LITTMDDILDLMEDVATAVSLYDVRAVTSEASQLAHIVTQSAQHVQQAVAMLSDMKQSAQILKQCEEIDRWESEADRVLR AAMSKLFREEDDVKTLIKLKAIYELLEEITDKCEDVANIIEGIVLENA
Sequences:
>Translated_208_residues MFGRFMPTEGKFFELFNAHAKYIVSGGRELELLIDNLADAEIHKQNVQTAEKAADKLTHEAIDLLHKTFITPLDRDEIHK LITTMDDILDLMEDVATAVSLYDVRAVTSEASQLAHIVTQSAQHVQQAVAMLSDMKQSAQILKQCEEIDRWESEADRVLR AAMSKLFREEDDVKTLIKLKAIYELLEEITDKCEDVANIIEGIVLENA >Mature_208_residues MFGRFMPTEGKFFELFNAHAKYIVSGGRELELLIDNLADAEIHKQNVQTAEKAADKLTHEAIDLLHKTFITPLDRDEIHK LITTMDDILDLMEDVATAVSLYDVRAVTSEASQLAHIVTQSAQHVQQAVAMLSDMKQSAQILKQCEEIDRWESEADRVLR AAMSKLFREEDDVKTLIKLKAIYELLEEITDKCEDVANIIEGIVLENA
Specific function: Could be involved in orthophosphate transport [H]
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 23543; Mature: 23543
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRFMPTEGKFFELFNAHAKYIVSGGRELELLIDNLADAEIHKQNVQTAEKAADKLTHE CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDLLHKTFITPLDRDEIHKLITTMDDILDLMEDVATAVSLYDVRAVTSEASQLAHIVTQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQHVQQAVAMLSDMKQSAQILKQCEEIDRWESEADRVLRAAMSKLFREEDDVKTLIKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH AIYELLEEITDKCEDVANIIEGIVLENA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFGRFMPTEGKFFELFNAHAKYIVSGGRELELLIDNLADAEIHKQNVQTAEKAADKLTHE CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDLLHKTFITPLDRDEIHKLITTMDDILDLMEDVATAVSLYDVRAVTSEASQLAHIVTQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQHVQQAVAMLSDMKQSAQILKQCEEIDRWESEADRVLRAAMSKLFREEDDVKTLIKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH AIYELLEEITDKCEDVANIIEGIVLENA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]