Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is acoA [H]
Identifier: 78066609
GI number: 78066609
Start: 2185396
End: 2186379
Strand: Reverse
Name: acoA [H]
Synonym: Bcep18194_A5140
Alternate gene names: 78066609
Gene position: 2186379-2185396 (Counterclockwise)
Preceding gene: 78066610
Following gene: 78066608
Centisome position: 59.19
GC content: 66.26
Gene sequence:
>984_bases ATGACCGCTTCGACACAGCTCAGCAGGGACAAGCTGCTGGACGCCTACCGGCTGATGCGCACGATCCGCGAATTCGAGGA ACGCCTGCACGTCGAATTCGCGACCGGCGAGATCCCCGGCTTCGTTCACCTGTATGCGGGCGAGGAGGCGTCCGCGGTCG GCACGATACTGCACCTCGGCCTCGACGACTACGTTGCGACCACGCACCGCGGCCACGGCCATTGCATCGCGAAGGGCGTC GACGTGCACGGGATGATGGCCGAGATCTACGGCAAGAAGACGGGCGTCTGCCACGGCAAGGGCGGCTCGATGCACATCGC CGACCTGGCGATGGGGATGCTCGGCGCGAACGGGATCGTCGGTGCGGGCGGCCCGCTCGTCTGCGGTGCGGCGCTCGCGG CGAAGCACAAGAAGACCGGCGGCGTCGGCGTGTGCTTCTTCGGCGACGGCGCATCGAACCAGGGCGTGATCTTCGAATCG ATGAACCTTGCGTCGGTGTGGCGGCTGCCCGCGATCTTCGTGGCCGAAAACAACGGCTATGCGGAAGCGACGTCGTCGAG CTGGTCGGTCGCCACCGACAACATCGCCGATCGTGCGAACGGGTTCGGGATGCCGGGCGTGATCGTCGACGGCTTCGACT TCTTCGCGGTGCACGAAGCGCTTGGCGAAGCCGTCGAGCGTGCGCGCAACGGTGGCGGCCCGACGCTCGTCGAGGTGAAG TTCACGCGCTATTTCGGTCACTTCGAAGGTGATGCGCAAACCTATCGCGCACCGGGTGAAGTGCAGAAGCTGCGCGACGA GAAGGACTGCCTGAAGCATTTCGAAACGCGCGTCGTGCGGGCCGAAGCATTGACGACCGCCGACCTGCGCGCGGTCGATG CCCAGGTGAAGGCGCTGATCGACGATGCGGTCGCGCAGGCCAAGGCCGCGCCGGTACCCGATGCCGCCGACCTGCTGACC GACGTCTACGTGTCGTACCCGTGA
Upstream 100 bases:
>100_bases ACGGCGGCTTCACGTTCCACTGACGGCCGCAGGCCGTGAAATCCGTCGCCACGGCCCGGCCGCGGCGGCATTCGCAGTCA GACCTACCCAGGAGACACAC
Downstream 100 bases:
>100_bases GCGCGGCCTGACACTGCGGCCGACACGGCGAACCGAACATTCCAGGAGACAGACATGGCAAGGAAGATCACTTATTCGCA GGCGATCAACGAAGCGCTCG
Product: pyruvate dehydrogenase (lipoamide)
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTASTQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLGLDDYVATTHRGHGHCIAKGV DVHGMMAEIYGKKTGVCHGKGGSMHIADLAMGMLGANGIVGAGGPLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFES MNLASVWRLPAIFVAENNGYAEATSSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVK FTRYFGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTADLRAVDAQVKALIDDAVAQAKAAPVPDAADLLT DVYVSYP
Sequences:
>Translated_327_residues MTASTQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLGLDDYVATTHRGHGHCIAKGV DVHGMMAEIYGKKTGVCHGKGGSMHIADLAMGMLGANGIVGAGGPLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFES MNLASVWRLPAIFVAENNGYAEATSSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVK FTRYFGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTADLRAVDAQVKALIDDAVAQAKAAPVPDAADLLT DVYVSYP >Mature_326_residues TASTQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLGLDDYVATTHRGHGHCIAKGVD VHGMMAEIYGKKTGVCHGKGGSMHIADLAMGMLGANGIVGAGGPLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESM NLASVWRLPAIFVAENNGYAEATSSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKF TRYFGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTADLRAVDAQVKALIDDAVAQAKAAPVPDAADLLTD VYVSYP
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde, in vitro. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=323, Percent_Identity=38.0804953560372, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI291084742, Length=325, Percent_Identity=38.1538461538462, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI4505685, Length=325, Percent_Identity=38.1538461538462, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI291084744, Length=332, Percent_Identity=37.3493975903614, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI291084757, Length=325, Percent_Identity=34.1538461538462, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI11386135, Length=323, Percent_Identity=28.4829721362229, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI258645172, Length=323, Percent_Identity=28.4829721362229, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17536047, Length=325, Percent_Identity=38.7692307692308, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI32564172, Length=325, Percent_Identity=38.7692307692308, Blast_Score=218, Evalue=3e-57, Organism=Caenorhabditis elegans, GI86563355, Length=317, Percent_Identity=26.813880126183, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI86563357, Length=317, Percent_Identity=26.813880126183, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6321026, Length=324, Percent_Identity=37.962962962963, Blast_Score=208, Evalue=9e-55, Organism=Drosophila melanogaster, GI24639740, Length=319, Percent_Identity=38.871473354232, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24639744, Length=319, Percent_Identity=38.871473354232, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI28571106, Length=319, Percent_Identity=38.871473354232, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24639746, Length=306, Percent_Identity=39.2156862745098, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24639748, Length=326, Percent_Identity=38.9570552147239, Blast_Score=197, Evalue=6e-51, Organism=Drosophila melanogaster, GI21355903, Length=331, Percent_Identity=26.2839879154079, Blast_Score=101, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 34731; Mature: 34599
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASTQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCHHHHHHHEEC LDDYVATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLAMGMLGANGIV CHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHCCCCCC GAGGPLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGY CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCEEEEECCCCC AEATSSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVK EEECCCCCCEECCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE FTRYFGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTADLRAVDAQVKALI EEEEECCCCCCCHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDAVAQAKAAPVPDAADLLTDVYVSYP HHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TASTQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCHHHHHHHEEC LDDYVATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLAMGMLGANGIV CHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHCCCCCC GAGGPLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGY CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCEEEEECCCCC AEATSSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVK EEECCCCCCEECCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE FTRYFGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTADLRAVDAQVKALI EEEEECCCCCCCHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDAVAQAKAAPVPDAADLLTDVYVSYP HHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2061286 [H]