| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066557
Identifier: 78066557
GI number: 78066557
Start: 2126071
End: 2126901
Strand: Reverse
Name: 78066557
Synonym: Bcep18194_A5088
Alternate gene names: NA
Gene position: 2126901-2126071 (Counterclockwise)
Preceding gene: 78066558
Following gene: 78066556
Centisome position: 57.58
GC content: 65.94
Gene sequence:
>831_bases ATGGCATCGGCCGGGCGGCTGGCTGGTTTTGCTTCGATGTTCATGATGGGTGTTGGCGTGGCGGTGCCTGCCTTTGCGAT CGATTGCGCGAAAGCCGTGCAGCCGATCGAGAAGCGCATCTGCGCGAGCCCGGTGCTGCGTGCAGCCGACACGCGGATGA ATTCGGCGTACACAGGCGCACTGAAGGCCGCGCCGGACACGGCTATCCGCGACATGCTGGTGCGCAGCCAGCGCCGCTGG ATCGACGCGCGCAACAAGCGTCTCGACGCCGATTACGAAGGCCGTCCGCTCGCCGTCGACGAAGTGCGCAAGGCAATCGA TCGGCGCACCGCCGTGCTGGCCGATCAATCGAACAAGGGGTTGATCGCGCGTGCGCAGGCCGAGCGCCAATGGCTCGCGA AATACACGGGCGGCCCGCTCACCGGTTTCGATGCAAACTGCGACTTCATTCCCGACGATGCGACCGGCGCGCACGTTTCC TATGCATGTTTCGGCGCGGTCCATGTGCAGCATCGCGCGCGGGTCTGCAGCCAGAGCGAGGACTGGGCGACCGGTGCGGT TTATCAGTACCGGTCGGTGAGCACGGCCGACGGCGGGAAGGTGCGACCCGTGGCATTCTGCGAGGCGCAGGCGCATGGGA GTGCGTGCGACAACGGTGGAGCGCAATCGGCGTGGATGCGTGCAGGGGCGTCTGGTGCCGATAACCGCGCGTCAGCGCCG GTTGCCGGGTTGCCGCAGCTCGATGCGGAAATGTGGCCGATCGGCGATGGCGACGATGCTGTGTGGTTCGATCGGTGCCT GAAGGCATCGGTGTTTCCGGACATGCGGTGA
Upstream 100 bases:
>100_bases ATACCGGCGCCCGGGCACGACAGGCCGCAATCGGCGATGCTGCATCGAGGCAGTGCGACCAAGAAAAAACCGACTGAGAG AAAGCATGCGTGGGATTCGA
Downstream 100 bases:
>100_bases AGTGCCGTGTCCAGCGTTTCATCAAGGTCCGCCTCGGCGGGCTTTTTGTTTCGTCGGCACACCTCAAGTGCCTTGGATGT CGATCGATTGATCGTGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MASAGRLAGFASMFMMGVGVAVPAFAIDCAKAVQPIEKRICASPVLRAADTRMNSAYTGALKAAPDTAIRDMLVRSQRRW IDARNKRLDADYEGRPLAVDEVRKAIDRRTAVLADQSNKGLIARAQAERQWLAKYTGGPLTGFDANCDFIPDDATGAHVS YACFGAVHVQHRARVCSQSEDWATGAVYQYRSVSTADGGKVRPVAFCEAQAHGSACDNGGAQSAWMRAGASGADNRASAP VAGLPQLDAEMWPIGDGDDAVWFDRCLKASVFPDMR
Sequences:
>Translated_276_residues MASAGRLAGFASMFMMGVGVAVPAFAIDCAKAVQPIEKRICASPVLRAADTRMNSAYTGALKAAPDTAIRDMLVRSQRRW IDARNKRLDADYEGRPLAVDEVRKAIDRRTAVLADQSNKGLIARAQAERQWLAKYTGGPLTGFDANCDFIPDDATGAHVS YACFGAVHVQHRARVCSQSEDWATGAVYQYRSVSTADGGKVRPVAFCEAQAHGSACDNGGAQSAWMRAGASGADNRASAP VAGLPQLDAEMWPIGDGDDAVWFDRCLKASVFPDMR >Mature_275_residues ASAGRLAGFASMFMMGVGVAVPAFAIDCAKAVQPIEKRICASPVLRAADTRMNSAYTGALKAAPDTAIRDMLVRSQRRWI DARNKRLDADYEGRPLAVDEVRKAIDRRTAVLADQSNKGLIARAQAERQWLAKYTGGPLTGFDANCDFIPDDATGAHVSY ACFGAVHVQHRARVCSQSEDWATGAVYQYRSVSTADGGKVRPVAFCEAQAHGSACDNGGAQSAWMRAGASGADNRASAPV AGLPQLDAEMWPIGDGDDAVWFDRCLKASVFPDMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29534; Mature: 29402
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAGRLAGFASMFMMGVGVAVPAFAIDCAKAVQPIEKRICASPVLRAADTRMNSAYTGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC LKAAPDTAIRDMLVRSQRRWIDARNKRLDADYEGRPLAVDEVRKAIDRRTAVLADQSNKG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCC LIARAQAERQWLAKYTGGPLTGFDANCDFIPDDATGAHVSYACFGAVHVQHRARVCSQSE EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCC DWATGAVYQYRSVSTADGGKVRPVAFCEAQAHGSACDNGGAQSAWMRAGASGADNRASAP CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC VAGLPQLDAEMWPIGDGDDAVWFDRCLKASVFPDMR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASAGRLAGFASMFMMGVGVAVPAFAIDCAKAVQPIEKRICASPVLRAADTRMNSAYTGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC LKAAPDTAIRDMLVRSQRRWIDARNKRLDADYEGRPLAVDEVRKAIDRRTAVLADQSNKG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCC LIARAQAERQWLAKYTGGPLTGFDANCDFIPDDATGAHVSYACFGAVHVQHRARVCSQSE EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCC DWATGAVYQYRSVSTADGGKVRPVAFCEAQAHGSACDNGGAQSAWMRAGASGADNRASAP CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC VAGLPQLDAEMWPIGDGDDAVWFDRCLKASVFPDMR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA