| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066556
Identifier: 78066556
GI number: 78066556
Start: 2124819
End: 2125868
Strand: Reverse
Name: 78066556
Synonym: Bcep18194_A5087
Alternate gene names: NA
Gene position: 2125868-2124819 (Counterclockwise)
Preceding gene: 78066557
Following gene: 78066555
Centisome position: 57.55
GC content: 66.38
Gene sequence:
>1050_bases ATGTCACTCATGGGAAACAACTCGCTGCGTGTCGTCGTGGTCGGCGGTGGCATCGTCGGTGCATCCACCGCATGGCATCT TGCGTGCTCGGGCGCACAGGTCACGCTGCTGGAACAGCAGGCGACGGCCGCAGGCGGTGCGACTCACTGGTCGTTCGGCT GGGTGGGTACCGGCAGTGCGCTTCCTTCTGAAGACCAGTCCAGGTTCTCTCGCACGCTCGGAGCGCTCCCGGAGTTCGCC CGGCTGGAGCGTGAACTCGGTCCGTTGCCGGTGACGACGCGCGGAGCACTTGTCTGGCTGGACACGGACGCGCAGACCGC TGCCCTGATCGACGAGCAGCGTGCGGCGGGCGTGCAAATGGAAGCGTTGGGGCGTCGAGAGGTGGCCCGGATGGAGCCGC GTCTTGCCCGGCTTCCCGAGTTGATCGCGTGGGCACCGGACGACTTCGTGGTCGAGCCGATCGACCTGACGCATCAGTTG CTGGCCGGTGCACAAGCGGCCGGCGCGGAGATCCGGTGCGGTTGCGCGGTCGAAGCGGTCGAAACGCGCAATGGGCACGC TGTCGGCGTCCGTACCGCGCACGGGCATGTACCGGCGGATGTCGTCGTCCTGGCGAACGCTGCTTCTACGGTTGCCATCG CCGCGGACCTCGGTGTGTCGTTGTCTGTTCGCGAGAAGCCGGCCGTGTTGATGCGGTTCGCTGTCGAGCCGGGTCTCATC AGCCATTTGCTCTATGGGCGGGATCTCGAAGTGCGGATTGGCCCATCGGGTAGCCTGCTGTCAGCCGCGGATCCTCCGGA AGAGGGCGACAGCGGGCTTGCAGCGCTTGCAGTGCGTACGGCCTCGGACATTTCGGCGCTGTTTGCCGAGCCGCCGACCC TCACGCTGCTCTCCGCGAAATCGGCGCTTCGGCCGATGACGAACGACGCGGTGCCGATCAACGGATTTTTGCCGGGCGTT GCAGGGGTTTATGCCGTTGTCGCGCACCCCGGCGTGATCCTGGCGCCCCAGCTTGGGCGATTGGCAGCGAACGCGATCAT GGCTGCGTAA
Upstream 100 bases:
>100_bases CCGGACGCGAGAGGGCGCGACGATTCGCGGTAATGGGCGGCAGGCAACCGCACAGCGGCGAAGCGGGACGGACGGTATAG TCGGAACCCCGCAACGTTCA
Downstream 100 bases:
>100_bases TTCGACGCTGGAGAGCGGGGCGGCGGGCGCGCTGCATGCGAGCGAATGCCACAGCCTCAAACGAGGACGTCCTGTCGGCG TAGCGGCGCGTGTGGCGATT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Fructosyl-Amino Acid Oxidase; D-Amino Acid Oxidase Protein; Glycine Oxidase ThiO; Oxidase
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSLMGNNSLRVVVVGGGIVGASTAWHLACSGAQVTLLEQQATAAGGATHWSFGWVGTGSALPSEDQSRFSRTLGALPEFA RLERELGPLPVTTRGALVWLDTDAQTAALIDEQRAAGVQMEALGRREVARMEPRLARLPELIAWAPDDFVVEPIDLTHQL LAGAQAAGAEIRCGCAVEAVETRNGHAVGVRTAHGHVPADVVVLANAASTVAIAADLGVSLSVREKPAVLMRFAVEPGLI SHLLYGRDLEVRIGPSGSLLSAADPPEEGDSGLAALAVRTASDISALFAEPPTLTLLSAKSALRPMTNDAVPINGFLPGV AGVYAVVAHPGVILAPQLGRLAANAIMAA
Sequences:
>Translated_349_residues MSLMGNNSLRVVVVGGGIVGASTAWHLACSGAQVTLLEQQATAAGGATHWSFGWVGTGSALPSEDQSRFSRTLGALPEFA RLERELGPLPVTTRGALVWLDTDAQTAALIDEQRAAGVQMEALGRREVARMEPRLARLPELIAWAPDDFVVEPIDLTHQL LAGAQAAGAEIRCGCAVEAVETRNGHAVGVRTAHGHVPADVVVLANAASTVAIAADLGVSLSVREKPAVLMRFAVEPGLI SHLLYGRDLEVRIGPSGSLLSAADPPEEGDSGLAALAVRTASDISALFAEPPTLTLLSAKSALRPMTNDAVPINGFLPGV AGVYAVVAHPGVILAPQLGRLAANAIMAA >Mature_348_residues SLMGNNSLRVVVVGGGIVGASTAWHLACSGAQVTLLEQQATAAGGATHWSFGWVGTGSALPSEDQSRFSRTLGALPEFAR LERELGPLPVTTRGALVWLDTDAQTAALIDEQRAAGVQMEALGRREVARMEPRLARLPELIAWAPDDFVVEPIDLTHQLL AGAQAAGAEIRCGCAVEAVETRNGHAVGVRTAHGHVPADVVVLANAASTVAIAADLGVSLSVREKPAVLMRFAVEPGLIS HLLYGRDLEVRIGPSGSLLSAADPPEEGDSGLAALAVRTASDISALFAEPPTLTLLSAKSALRPMTNDAVPINGFLPGVA GVYAVVAHPGVILAPQLGRLAANAIMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35971; Mature: 35839
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLMGNNSLRVVVVGGGIVGASTAWHLACSGAQVTLLEQQATAAGGATHWSFGWVGTGSA CCCCCCCCEEEEEEECCEECCCCEEEEEECCCEEEEEECHHHCCCCCCCCCCEEEECCCC LPSEDQSRFSRTLGALPEFARLERELGPLPVTTRGALVWLDTDAQTAALIDEQRAAGVQM CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCEEEEEECCCCHHHHHHHHHHCCCCH EALGRREVARMEPRLARLPELIAWAPDDFVVEPIDLTHQLLAGAQAAGAEIRCGCAVEAV HHHCHHHHHHHCHHHHHCCHHHEECCCCCEECCHHHHHHHHHCCHHCCCEEEECEEEEEE ETRNGHAVGVRTAHGHVPADVVVLANAASTVAIAADLGVSLSVREKPAVLMRFAVEPGLI ECCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCCEEEEEECCCCHH SHLLYGRDLEVRIGPSGSLLSAADPPEEGDSGLAALAVRTASDISALFAEPPTLTLLSAK HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCEEEEECH SALRPMTNDAVPINGFLPGVAGVYAVVAHPGVILAPQLGRLAANAIMAA HHHCCCCCCCEECCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHCC >Mature Secondary Structure SLMGNNSLRVVVVGGGIVGASTAWHLACSGAQVTLLEQQATAAGGATHWSFGWVGTGSA CCCCCCCEEEEEEECCEECCCCEEEEEECCCEEEEEECHHHCCCCCCCCCCEEEECCCC LPSEDQSRFSRTLGALPEFARLERELGPLPVTTRGALVWLDTDAQTAALIDEQRAAGVQM CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCEEEEEECCCCHHHHHHHHHHCCCCH EALGRREVARMEPRLARLPELIAWAPDDFVVEPIDLTHQLLAGAQAAGAEIRCGCAVEAV HHHCHHHHHHHCHHHHHCCHHHEECCCCCEECCHHHHHHHHHCCHHCCCEEEECEEEEEE ETRNGHAVGVRTAHGHVPADVVVLANAASTVAIAADLGVSLSVREKPAVLMRFAVEPGLI ECCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCCEEEEEECCCCHH SHLLYGRDLEVRIGPSGSLLSAADPPEEGDSGLAALAVRTASDISALFAEPPTLTLLSAK HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCEEEEECH SALRPMTNDAVPINGFLPGVAGVYAVVAHPGVILAPQLGRLAANAIMAA HHHCCCCCCCEECCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA