| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066534
Identifier: 78066534
GI number: 78066534
Start: 2102689
End: 2103624
Strand: Reverse
Name: 78066534
Synonym: Bcep18194_A5065
Alternate gene names: NA
Gene position: 2103624-2102689 (Counterclockwise)
Preceding gene: 78066535
Following gene: 78066533
Centisome position: 56.95
GC content: 63.68
Gene sequence:
>936_bases ATGCGCGCGATCGTCTCGTCGATTTCTTTTCCCGTTGCATGGAAGCAGGACGCTGAAGTGAATGCGAATCTGAACCGGAC TTCGAATCCGTCGCCGCCGGCCGATCGGCAGCATGTGTTTCCGCCGCCGCTGGATCGCGATTACCGCGTCGAAGACGGGC GCGTGCTGACGCGCTCGCTGGAAGCGCATATCGTCGATCACTGCAACCTGACCTGCGCGGAATGCTGCTCGCTGTCGCCG CTGCTGCCCGAGTGGTACGCGAGCCCCGAATCGCTCGAAGCCGATCTGCGCATGGCCGCGAAGGTGTTGCGCCCGCGGAT GTTCAAGCTGGTCGGCGGCGAACCGCTGCTGCATCCTGCGCTCGTCGAACTCGTCCAGCGCGTGCGCGCCACGGGCATCG CGCCCGTGATCTCCGTCACGACGAACGGCCTGAAGCTCGGCGAGATGACGTGCGCGTTCTGGCAGGCGGTGGATGCGCTG ACGATCTCGCGCTATCCGAAGCCGTCGCTGTCGCCCGATCTGGTCGCGCACATCGAGCGCCAGGCCGCACGCTTCGACGT GCGCCTGAACTGGAAGGTGCAGGACGTGTTCACGACGATGAATCGCGTAGAGCCCGGAACCGATCGCGACGAAGCGCAGC GCCTTTATCACGATTGCTGGATCCGCGAGCGCTGCCATATGATTCGCGACGGCATGTTCTACACCTGCACGCGTCCGGCG CATTTCCATACGCTCTACAAGGGCGAGAAGGATTTTCAATCCGACGGCCTGCCGTTGCGTAACGACACCGCCATGCTCGA CGCAATGCTCGCCTATCTGCAACGCGAGGCGCCGCTCGAAGCGTGCCTGCATTGCCAGGGCGGCAGCGCGCCGGTGGCGC CGCATCGCATCCTCAAACGCATTGAAGTGGACTCCTTGAAGCCTCGTTATCCATGA
Upstream 100 bases:
>100_bases CACGCGCTCAAGCTCTGGATCGTGCAAGGCTGGCTCGACGACCCTTCGCGCTTTGCATCGCATCTGAACGGTGCGGTGAC GATGGCGTCCGCGATGGTGG
Downstream 100 bases:
>100_bases TCGTCGGCACGCGCGACCTGTTCGGCTTCGACCGGCTTCACTACCATCCGCGCAGCGGTGCGACGGCGTCCGGTATCGGG GCCGTCCTGCACGCGTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRAIVSSISFPVAWKQDAEVNANLNRTSNPSPPADRQHVFPPPLDRDYRVEDGRVLTRSLEAHIVDHCNLTCAECCSLSP LLPEWYASPESLEADLRMAAKVLRPRMFKLVGGEPLLHPALVELVQRVRATGIAPVISVTTNGLKLGEMTCAFWQAVDAL TISRYPKPSLSPDLVAHIERQAARFDVRLNWKVQDVFTTMNRVEPGTDRDEAQRLYHDCWIRERCHMIRDGMFYTCTRPA HFHTLYKGEKDFQSDGLPLRNDTAMLDAMLAYLQREAPLEACLHCQGGSAPVAPHRILKRIEVDSLKPRYP
Sequences:
>Translated_311_residues MRAIVSSISFPVAWKQDAEVNANLNRTSNPSPPADRQHVFPPPLDRDYRVEDGRVLTRSLEAHIVDHCNLTCAECCSLSP LLPEWYASPESLEADLRMAAKVLRPRMFKLVGGEPLLHPALVELVQRVRATGIAPVISVTTNGLKLGEMTCAFWQAVDAL TISRYPKPSLSPDLVAHIERQAARFDVRLNWKVQDVFTTMNRVEPGTDRDEAQRLYHDCWIRERCHMIRDGMFYTCTRPA HFHTLYKGEKDFQSDGLPLRNDTAMLDAMLAYLQREAPLEACLHCQGGSAPVAPHRILKRIEVDSLKPRYP >Mature_311_residues MRAIVSSISFPVAWKQDAEVNANLNRTSNPSPPADRQHVFPPPLDRDYRVEDGRVLTRSLEAHIVDHCNLTCAECCSLSP LLPEWYASPESLEADLRMAAKVLRPRMFKLVGGEPLLHPALVELVQRVRATGIAPVISVTTNGLKLGEMTCAFWQAVDAL TISRYPKPSLSPDLVAHIERQAARFDVRLNWKVQDVFTTMNRVEPGTDRDEAQRLYHDCWIRERCHMIRDGMFYTCTRPA HFHTLYKGEKDFQSDGLPLRNDTAMLDAMLAYLQREAPLEACLHCQGGSAPVAPHRILKRIEVDSLKPRYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35220; Mature: 35220
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIVSSISFPVAWKQDAEVNANLNRTSNPSPPADRQHVFPPPLDRDYRVEDGRVLTRSL CCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EAHIVDHCNLTCAECCSLSPLLPEWYASPESLEADLRMAAKVLRPRMFKLVGGEPLLHPA HHHHHHCCCCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LVELVQRVRATGIAPVISVTTNGLKLGEMTCAFWQAVDALTISRYPKPSLSPDLVAHIER HHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH QAARFDVRLNWKVQDVFTTMNRVEPGTDRDEAQRLYHDCWIRERCHMIRDGMFYTCTRPA HHHHEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCH HFHTLYKGEKDFQSDGLPLRNDTAMLDAMLAYLQREAPLEACLHCQGGSAPVAPHRILKR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHH IEVDSLKPRYP HHHCCCCCCCC >Mature Secondary Structure MRAIVSSISFPVAWKQDAEVNANLNRTSNPSPPADRQHVFPPPLDRDYRVEDGRVLTRSL CCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EAHIVDHCNLTCAECCSLSPLLPEWYASPESLEADLRMAAKVLRPRMFKLVGGEPLLHPA HHHHHHCCCCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LVELVQRVRATGIAPVISVTTNGLKLGEMTCAFWQAVDALTISRYPKPSLSPDLVAHIER HHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH QAARFDVRLNWKVQDVFTTMNRVEPGTDRDEAQRLYHDCWIRERCHMIRDGMFYTCTRPA HHHHEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCH HFHTLYKGEKDFQSDGLPLRNDTAMLDAMLAYLQREAPLEACLHCQGGSAPVAPHRILKR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHH IEVDSLKPRYP HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA