| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is yojK [H]
Identifier: 78066532
GI number: 78066532
Start: 2100415
End: 2101653
Strand: Reverse
Name: yojK [H]
Synonym: Bcep18194_A5063
Alternate gene names: 78066532
Gene position: 2101653-2100415 (Counterclockwise)
Preceding gene: 78066533
Following gene: 78066530
Centisome position: 56.89
GC content: 68.77
Gene sequence:
>1239_bases ATGCCGCGCATCGCCCAACCTGAGTCGTTCATGAAACGCATCCTGTTCTGCGTGGTGCCCGAGAAAGGGCACGTCAATCC GTGTATCGGCCCGGCCCAGCATCTGCGCGATGCCGGGTGCGACGTCGCGTTCTATGCGCCGGCGGACATCAGCGCACAGC TCGACGGTGCCGGCGGCTTCGAATTCGTCGGGCCGCGCGAGACGCCCGAGCGCCACGACCTGTCGCGCGGCGCGAGCTTC GCCGCGAACATTCGCGACGCGGACTGGCTGCGGCACTGGATCCGCACGCTGCTGATCGATCTCGCGCCCGCGCAGGTGGA CGGCATCCGTGCGGTGCTGCGCGACTGGCGGCCCGACGTGGTCGTGATCGATCCGCTGCTCTATGCGGCGGCGATCGCCG CGGAGCTGGAAGGGCTGCCGTGGGTCTCGATGTCGAATTCTCTGAATCCGGTGCTGCCGGACGAGCTCGATTCGGAACTG CTGCGCACGGTGCGATGGCTCGCGCCGGAACGCACGCGCCTGTTCGCGCGCTACGGGCTCGATGCGCGTTTTCGCGGATG CGACATCCTTTCACCGCACCTGACGCTCGCGTTCACGACCGACGCGCTGGTCGGTGCGCCGCCGCCCGGTGTCGAGCTGG TCGGCCCGGCGCTGCCGTCCGGCCCGCGCGGCGACGAGACGCCGTTCCCGTGGGAACGCCTCGATGCGGACCGTCCGCTC GTCTACATGTCGCTCGGCAGCCAGCTTTACTACCATCCCGATGTGTTTGCGAAGGTCATCGACGCGACGCGCGCGACGTC GGCGCAACTGGTGCTGTCGGTGGGCGAACTGGTCGATTCGGATCTGCTGCCGGCCGACGACGAACGTGTGGTCGCGGTGC GTTACGTGCCGCAACTGGCGCTGCTGCAGCGCACGCACGCGTTCGTCAGCCACGGCGGCGCGAATTCGGTGATGGAGTCG CTTGCGTGCGGCGTGCCGATGCTGCTGTCGCCGTTCTGCAACGACCAGTTCCATTCGGCGCACTTCGTCGAGCGGGCCGG TGCGGGGTGCGTGCTGGATCTGCAGCAGGCCGGCGTGGCGGAGATTGCCGATGCGCTCGAACGCCTGTTGCGGCCCGGGA CGTTGCGCGAGCGGGCGGCGCGGATCCGCACGAGCTATGCATCGCGCAACGGTTCTGCCGAGGCCGCGCGCCTGATCAGC GCACTCGCTTCAGGAAACCGCCTGGCGACAGCGTCATGA
Upstream 100 bases:
>100_bases GCCGGCAAGCTCGGCCTGGCCACACCCACGCTGCAGACGGACAACGAACGCGTGCTGTGGACGACGCTGTCGCTGATCCT CGATCATTTCGACCACCTCG
Downstream 100 bases:
>100_bases GGACGCGGTCCTCGATGTCGTAGTCGACCTCGAACCGGTCGTCGCGGGCCAGGAATTCATGCGCGGCGGTGGCCGGGTTG TTGCCTTTGCCGTACGGCTT
Product: UDP-glycosyltransferase, MGT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPRIAQPESFMKRILFCVVPEKGHVNPCIGPAQHLRDAGCDVAFYAPADISAQLDGAGGFEFVGPRETPERHDLSRGASF AANIRDADWLRHWIRTLLIDLAPAQVDGIRAVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDELDSEL LRTVRWLAPERTRLFARYGLDARFRGCDILSPHLTLAFTTDALVGAPPPGVELVGPALPSGPRGDETPFPWERLDADRPL VYMSLGSQLYYHPDVFAKVIDATRATSAQLVLSVGELVDSDLLPADDERVVAVRYVPQLALLQRTHAFVSHGGANSVMES LACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQQAGVAEIADALERLLRPGTLRERAARIRTSYASRNGSAEAARLIS ALASGNRLATAS
Sequences:
>Translated_412_residues MPRIAQPESFMKRILFCVVPEKGHVNPCIGPAQHLRDAGCDVAFYAPADISAQLDGAGGFEFVGPRETPERHDLSRGASF AANIRDADWLRHWIRTLLIDLAPAQVDGIRAVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDELDSEL LRTVRWLAPERTRLFARYGLDARFRGCDILSPHLTLAFTTDALVGAPPPGVELVGPALPSGPRGDETPFPWERLDADRPL VYMSLGSQLYYHPDVFAKVIDATRATSAQLVLSVGELVDSDLLPADDERVVAVRYVPQLALLQRTHAFVSHGGANSVMES LACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQQAGVAEIADALERLLRPGTLRERAARIRTSYASRNGSAEAARLIS ALASGNRLATAS >Mature_411_residues PRIAQPESFMKRILFCVVPEKGHVNPCIGPAQHLRDAGCDVAFYAPADISAQLDGAGGFEFVGPRETPERHDLSRGASFA ANIRDADWLRHWIRTLLIDLAPAQVDGIRAVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDELDSELL RTVRWLAPERTRLFARYGLDARFRGCDILSPHLTLAFTTDALVGAPPPGVELVGPALPSGPRGDETPFPWERLDADRPLV YMSLGSQLYYHPDVFAKVIDATRATSAQLVLSVGELVDSDLLPADDERVVAVRYVPQLALLQRTHAFVSHGGANSVMESL ACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQQAGVAEIADALERLLRPGTLRERAARIRTSYASRNGSAEAARLISA LASGNRLATAS
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
Organism=Drosophila melanogaster, GI24649343, Length=409, Percent_Identity=24.6943765281174, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 - InterPro: IPR006326 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 44746; Mature: 44614
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIAQPESFMKRILFCVVPEKGHVNPCIGPAQHLRDAGCDVAFYAPADISAQLDGAGGF CCCCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCEEECCCCCC EFVGPRETPERHDLSRGASFAANIRDADWLRHWIRTLLIDLAPAQVDGIRAVLRDWRPDV CCCCCCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE VVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDELDSELLRTVRWLAPERTRLFARYGL EEECHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC DARFRGCDILSPHLTLAFTTDALVGAPPPGVELVGPALPSGPRGDETPFPWERLDADRPL CCCCCCCCEECCCEEEEEECCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCE VYMSLGSQLYYHPDVFAKVIDATRATSAQLVLSVGELVDSDLLPADDERVVAVRYVPQLA EEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHH LLQRTHAFVSHGGANSVMESLACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQQAGVA HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHCCHH EIADALERLLRPGTLRERAARIRTSYASRNGSAEAARLISALASGNRLATAS HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure PRIAQPESFMKRILFCVVPEKGHVNPCIGPAQHLRDAGCDVAFYAPADISAQLDGAGGF CCCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCEEECCCCCC EFVGPRETPERHDLSRGASFAANIRDADWLRHWIRTLLIDLAPAQVDGIRAVLRDWRPDV CCCCCCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE VVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDELDSELLRTVRWLAPERTRLFARYGL EEECHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC DARFRGCDILSPHLTLAFTTDALVGAPPPGVELVGPALPSGPRGDETPFPWERLDADRPL CCCCCCCCEECCCEEEEEECCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCE VYMSLGSQLYYHPDVFAKVIDATRATSAQLVLSVGELVDSDLLPADDERVVAVRYVPQLA EEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHH LLQRTHAFVSHGGANSVMESLACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQQAGVA HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHCCHH EIADALERLLRPGTLRERAARIRTSYASRNGSAEAARLISALASGNRLATAS HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]