| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066510
Identifier: 78066510
GI number: 78066510
Start: 2078134
End: 2078703
Strand: Reverse
Name: 78066510
Synonym: Bcep18194_A5041
Alternate gene names: NA
Gene position: 2078703-2078134 (Counterclockwise)
Preceding gene: 78066511
Following gene: 78066509
Centisome position: 56.27
GC content: 64.74
Gene sequence:
>570_bases ATGGCGCGTTCGATCCAGATCCCACCTCCCACCTCGCCGATGAAGACACGCTTCCTTTCGCCTTGTCTGTTTCTTGCCGC CGCCGCGCTGTGCAACCTGGCGCAAGCCGCCGCCGAATACACATGGACCGATGCGGCCGGCGCGCATGCGGTGACGCTCG CGAGAACCGAGTCCGGCGGCGACGTCGAGCTCAAGGTGGCCGCGACGCTCGACGGCCGGCCCGACTGGACCGTGCGCGAC TACGTGAAGGAGTGCCCGGTCGACGTGATCCTCGATGTCGTGCCCGCGTCGATCGAAATGCGCGACCTGCTCGGCAACGG CCGCAAGCAGTTCATGTTCGCGTACAAGATCGGCTGCCGCGGCGACGTGAGCGCCGACCAGGTCAAGTACTTCCTGATCG ACCAGGGCACGAAGTACGTGCTGCGCGGCGAGGAAACCGTCACGGTCAACGGCAAGTTCATGGATGGCGGCGCGGCCCCG GTACCGAATGCAGACCTGAAAGCTCAACCCGCATTTCTGCGCTACATGACGAAGCATTGGCACGGGATCAGCGCGCGCGA CTATCGATAG
Upstream 100 bases:
>100_bases GGACGTTGTACCGGCGGATGAAGGCGCTTGGGCTCGGGACGCGCGAGCGCTGAGCGGGCGTGCGGTGGGCGACTGGCAGC GGCAGGCGGCTTTGTCGATA
Downstream 100 bases:
>100_bases GCATGCGCTCGAGGCTCGCGACGGTGCGTCCGACACGCGCCTGATGAGGCGAGCTTGAGCATGCAACGCGATAAGAAATC ATGACAATACGACAATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MARSIQIPPPTSPMKTRFLSPCLFLAAAALCNLAQAAAEYTWTDAAGAHAVTLARTESGGDVELKVAATLDGRPDWTVRD YVKECPVDVILDVVPASIEMRDLLGNGRKQFMFAYKIGCRGDVSADQVKYFLIDQGTKYVLRGEETVTVNGKFMDGGAAP VPNADLKAQPAFLRYMTKHWHGISARDYR
Sequences:
>Translated_189_residues MARSIQIPPPTSPMKTRFLSPCLFLAAAALCNLAQAAAEYTWTDAAGAHAVTLARTESGGDVELKVAATLDGRPDWTVRD YVKECPVDVILDVVPASIEMRDLLGNGRKQFMFAYKIGCRGDVSADQVKYFLIDQGTKYVLRGEETVTVNGKFMDGGAAP VPNADLKAQPAFLRYMTKHWHGISARDYR >Mature_188_residues ARSIQIPPPTSPMKTRFLSPCLFLAAAALCNLAQAAAEYTWTDAAGAHAVTLARTESGGDVELKVAATLDGRPDWTVRDY VKECPVDVILDVVPASIEMRDLLGNGRKQFMFAYKIGCRGDVSADQVKYFLIDQGTKYVLRGEETVTVNGKFMDGGAAPV PNADLKAQPAFLRYMTKHWHGISARDYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20700; Mature: 20569
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSIQIPPPTSPMKTRFLSPCLFLAAAALCNLAQAAAEYTWTDAAGAHAVTLARTESGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC DVELKVAATLDGRPDWTVRDYVKECPVDVILDVVPASIEMRDLLGNGRKQFMFAYKIGCR CEEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHCCCCEEHHHHHCCCCCEEEEEEEECCC GDVSADQVKYFLIDQGTKYVLRGEETVTVNGKFMDGGAAPVPNADLKAQPAFLRYMTKHW CCCCHHHEEEEEEECCCEEEEECCEEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHHHC HGISARDYR CCCCCCCCC >Mature Secondary Structure ARSIQIPPPTSPMKTRFLSPCLFLAAAALCNLAQAAAEYTWTDAAGAHAVTLARTESGG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC DVELKVAATLDGRPDWTVRDYVKECPVDVILDVVPASIEMRDLLGNGRKQFMFAYKIGCR CEEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHCCCCEEHHHHHCCCCCEEEEEEEECCC GDVSADQVKYFLIDQGTKYVLRGEETVTVNGKFMDGGAAPVPNADLKAQPAFLRYMTKHW CCCCHHHEEEEEEECCCEEEEECCEEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHHHC HGISARDYR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA