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The map label for this gene is oxyR [H]

Identifier: 78065849

GI number: 78065849

Start: 1336027

End: 1336944

Strand: Reverse

Name: oxyR [H]

Synonym: Bcep18194_A4378

Alternate gene names: 78065849

Gene position: 1336944-1336027 (Counterclockwise)

Preceding gene: 78065856

Following gene: 78065847

Centisome position: 36.19

GC content: 66.01

Gene sequence:

>918_bases
ATGCTGACCCGATTGAGAGACATGGATTTGCAGTTGCTGCGGCTCTTTCTGACGATCGTCGAAAGTGGCGGCTTCAGCGC
CGCGCAGGGCACGCTCGGGATGGCGCCGTCGACGATCAGCACGCAGATGGCGAAGCTCGAGACGCGTCTCGGATTCCGGC
TGTGCGATCGCGGCAAGAGCGGCTTCCGGCTGACACCGAAGGGCGAACGCGTGCTGCAGTCGACGCGGCGGCTCCTGCAC
GCGATGGACGTATTCACGCGCGATACGCAGCACGTGTCGGGCACGTTGCTCGGCGAGCTGCGCATCGGGCTGTCCGAGCG
GCTCGCGCCGGACGTCGTCGAATCGATCGCGGCGGCCGTCGGCGGCTTCCGCGAACGGGCGCCGGACGTGCTGATCGAGA
TGATCGCGGTGCCGCCCGACGAACTGGAACGCCGGCTGCTGAAAGGTGAACTGCAGCTCGCGATCGGCTACTTTTCCGGC
CACCAGGCCGGCCTGCACTACGCACCGCTGTTCGTCGAACACCAGTCGCTGCACTGCGGCGCCCGGCATCCGCTGTTTGC
GAAAAAGACCGTGTCGGTCAACGACATTGCGAACGCGAGCAACGTCGCTCGGCTCTACAAGACGAATACGTCGGGTGCGG
CGATGCGCAACGCGCAACCGACCGCGTTCTCCGAAAACGTCGACGCCGACGTGATCTTCATCCTGTCCGGCGCGCATGTC
GGTTTCCTGCCCGACCACGTCGCGGCGCCCTGGGTTGCCGCGGGCAAGATGCGCCGGCTGCTCGCGAGCAAGCTAAGCCA
TACGATCGAATTCCAGCTGGCGACACCGCGGAACTGCGACGGCAGCGAAGCGCTGGAGGCGTTCACGGCGGCGCTCGCCG
AACAGTTCGGCGGGCTCGACGGTTTCGCAGATCAGTGA

Upstream 100 bases:

>100_bases
GCCGCGCGGCTGGCGACCTCGTGCCCGATTCTGCCGTCACGACATCCGACGAAAAATATGAACTAACATAAGCCGACTTC
ACAAAACGCGATGTATCGCC

Downstream 100 bases:

>100_bases
CCGGCGCGCGCCGCCCCGGTTCGCGTCAGACGAGCTGGTCCGACGCGATGACCTGCATACCCGGCCGCGCGTCGATTGCC
GCGTCGAGCATCGCGCGGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MLTRLRDMDLQLLRLFLTIVESGGFSAAQGTLGMAPSTISTQMAKLETRLGFRLCDRGKSGFRLTPKGERVLQSTRRLLH
AMDVFTRDTQHVSGTLLGELRIGLSERLAPDVVESIAAAVGGFRERAPDVLIEMIAVPPDELERRLLKGELQLAIGYFSG
HQAGLHYAPLFVEHQSLHCGARHPLFAKKTVSVNDIANASNVARLYKTNTSGAAMRNAQPTAFSENVDADVIFILSGAHV
GFLPDHVAAPWVAAGKMRRLLASKLSHTIEFQLATPRNCDGSEALEAFTAALAEQFGGLDGFADQ

Sequences:

>Translated_305_residues
MLTRLRDMDLQLLRLFLTIVESGGFSAAQGTLGMAPSTISTQMAKLETRLGFRLCDRGKSGFRLTPKGERVLQSTRRLLH
AMDVFTRDTQHVSGTLLGELRIGLSERLAPDVVESIAAAVGGFRERAPDVLIEMIAVPPDELERRLLKGELQLAIGYFSG
HQAGLHYAPLFVEHQSLHCGARHPLFAKKTVSVNDIANASNVARLYKTNTSGAAMRNAQPTAFSENVDADVIFILSGAHV
GFLPDHVAAPWVAAGKMRRLLASKLSHTIEFQLATPRNCDGSEALEAFTAALAEQFGGLDGFADQ
>Mature_305_residues
MLTRLRDMDLQLLRLFLTIVESGGFSAAQGTLGMAPSTISTQMAKLETRLGFRLCDRGKSGFRLTPKGERVLQSTRRLLH
AMDVFTRDTQHVSGTLLGELRIGLSERLAPDVVESIAAAVGGFRERAPDVLIEMIAVPPDELERRLLKGELQLAIGYFSG
HQAGLHYAPLFVEHQSLHCGARHPLFAKKTVSVNDIANASNVARLYKTNTSGAAMRNAQPTAFSENVDADVIFILSGAHV
GFLPDHVAAPWVAAGKMRRLLASKLSHTIEFQLATPRNCDGSEALEAFTAALAEQFGGLDGFADQ

Specific function: Required for the induction the katG gene for catalase. Involved in the response to hydrogen peroxide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786401, Length=266, Percent_Identity=25.5639097744361, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790262, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI157672245, Length=182, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33091; Mature: 33091

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRLRDMDLQLLRLFLTIVESGGFSAAQGTLGMAPSTISTQMAKLETRLGFRLCDRGKS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GFRLTPKGERVLQSTRRLLHAMDVFTRDTQHVSGTLLGELRIGLSERLAPDVVESIAAAV
CCEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHH
GGFRERAPDVLIEMIAVPPDELERRLLKGELQLAIGYFSGHQAGLHYAPLFVEHQSLHCG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCCEECCEEEECCCCCCC
ARHPLFAKKTVSVNDIANASNVARLYKTNTSGAAMRNAQPTAFSENVDADVIFILSGAHV
CCCCCCEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
GFLPDHVAAPWVAAGKMRRLLASKLSHTIEFQLATPRNCDGSEALEAFTAALAEQFGGLD
CCCCHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
GFADQ
CCCCC
>Mature Secondary Structure
MLTRLRDMDLQLLRLFLTIVESGGFSAAQGTLGMAPSTISTQMAKLETRLGFRLCDRGKS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GFRLTPKGERVLQSTRRLLHAMDVFTRDTQHVSGTLLGELRIGLSERLAPDVVESIAAAV
CCEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHH
GGFRERAPDVLIEMIAVPPDELERRLLKGELQLAIGYFSGHQAGLHYAPLFVEHQSLHCG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCCEECCEEEECCCCCCC
ARHPLFAKKTVSVNDIANASNVARLYKTNTSGAAMRNAQPTAFSENVDADVIFILSGAHV
CCCCCCEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
GFLPDHVAAPWVAAGKMRRLLASKLSHTIEFQLATPRNCDGSEALEAFTAALAEQFGGLD
CCCCHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
GFADQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9733688 [H]