| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065845
Identifier: 78065845
GI number: 78065845
Start: 1329624
End: 1330574
Strand: Reverse
Name: 78065845
Synonym: Bcep18194_A4374
Alternate gene names: NA
Gene position: 1330574-1329624 (Counterclockwise)
Preceding gene: 78065847
Following gene: 78065840
Centisome position: 36.02
GC content: 64.56
Gene sequence:
>951_bases ATGCCCAAGACCTACGCCGACCAGCCCGTCTGGCGCGACATGCAGAAATTCCTTCCGACCGACTTCCAGTGGAAGGACGG CCAGCAACCGACGGAAGAATGGTGGTCCTGGCACGGCCATCGCATGCATCTCGACACGTACCGCAACCCGCAAGCGCGGG TGAAGGTGATCCTGTTTCATGGCGTAGGCACCAACGGCCGGCAGATGTCGATGATCCTCGGCGAGCAGCTCGCGCGCCGC GGCTACGAAACGGTCGCGGTCGACATGCCCGAATACGGGATGACCGAAGTCGCCAGGGGTGCGCTGGTCCGCTATGACGA CTGGGTGCGCGCGGGCAGCGATCTGATCGACGCGGAGCGCGCAAAGGACGACCGGCCGATCGTGCTCTACGGACTGAGCG CGGGCGGGATGCTCACGTATCACGTGGCCGCGCTGAACGGCAAGGTCAAGGGCATCGTCGGCATGACCTTCCTCGACCAG CGCCTTCAGCAGGTGCGCGACGAAACCGCGCGCAGCGTGTTCATGAGCCGCGTCGGCAGCCCGATGATGCATCTCACCGC GATGACTCCGCTGAAATCGATGCGGGTACCGATGACGCTCGCCAGCAAGATGTCCGCGCTCGTCAACGACCCGGATGCGC TGAAGGTGTGGCTGTCGGATCGCACCTCCGCCGGCAATGCGATGACGATCGCGTTCCTCGATTCCTACATGTCGTACCGG CCGGCGGTCGAGCCGGAGGATTTCGCCGTGTGCCCGATCCTGCTCACGCAACCGGCTGCGGATCGCTGGACGCCGCTGCA CCTGAGCGAACCGTTCCTGCAGCGCGTGCGCAAAGTGCCGGTGAAGGTCGTCATGCTGGACAACGCGGGCCACTATCCGC TCGAACAGCCGGGGCTGTCGCAGATGGTCGATGCGATCGATGCGTTCTATCGCGAGGTGACGGCGAAATGA
Upstream 100 bases:
>100_bases GGCCCGCACGCTGCTGCTGGCTGCCGGCCTGTCGAGTGCACCGCTCGCACCGGCACTGGCCGACGATGCCGTTTCGCCCA ATCCACCGGAGTCCGCCACC
Downstream 100 bases:
>100_bases ATGCCGTCCACCCGCATGGTGCCGCGCGCGGATCGCCTAGAACACCGTTCGAACGCCGACCCGCAACACGCCCTGCCGCG CGCCCGACGATGCGGTGAAC
Product: lysophospholipase-like
Products: NA
Alternate protein names: Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase; Lysophospholipase-Like; Signal Peptide; AB Hydrolase Superfamily Protein; Esterase/Lipase/Thioesterase Family Protein
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPKTYADQPVWRDMQKFLPTDFQWKDGQQPTEEWWSWHGHRMHLDTYRNPQARVKVILFHGVGTNGRQMSMILGEQLARR GYETVAVDMPEYGMTEVARGALVRYDDWVRAGSDLIDAERAKDDRPIVLYGLSAGGMLTYHVAALNGKVKGIVGMTFLDQ RLQQVRDETARSVFMSRVGSPMMHLTAMTPLKSMRVPMTLASKMSALVNDPDALKVWLSDRTSAGNAMTIAFLDSYMSYR PAVEPEDFAVCPILLTQPAADRWTPLHLSEPFLQRVRKVPVKVVMLDNAGHYPLEQPGLSQMVDAIDAFYREVTAK
Sequences:
>Translated_316_residues MPKTYADQPVWRDMQKFLPTDFQWKDGQQPTEEWWSWHGHRMHLDTYRNPQARVKVILFHGVGTNGRQMSMILGEQLARR GYETVAVDMPEYGMTEVARGALVRYDDWVRAGSDLIDAERAKDDRPIVLYGLSAGGMLTYHVAALNGKVKGIVGMTFLDQ RLQQVRDETARSVFMSRVGSPMMHLTAMTPLKSMRVPMTLASKMSALVNDPDALKVWLSDRTSAGNAMTIAFLDSYMSYR PAVEPEDFAVCPILLTQPAADRWTPLHLSEPFLQRVRKVPVKVVMLDNAGHYPLEQPGLSQMVDAIDAFYREVTAK >Mature_315_residues PKTYADQPVWRDMQKFLPTDFQWKDGQQPTEEWWSWHGHRMHLDTYRNPQARVKVILFHGVGTNGRQMSMILGEQLARRG YETVAVDMPEYGMTEVARGALVRYDDWVRAGSDLIDAERAKDDRPIVLYGLSAGGMLTYHVAALNGKVKGIVGMTFLDQR LQQVRDETARSVFMSRVGSPMMHLTAMTPLKSMRVPMTLASKMSALVNDPDALKVWLSDRTSAGNAMTIAFLDSYMSYRP AVEPEDFAVCPILLTQPAADRWTPLHLSEPFLQRVRKVPVKVVMLDNAGHYPLEQPGLSQMVDAIDAFYREVTAK
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35779; Mature: 35648
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTYADQPVWRDMQKFLPTDFQWKDGQQPTEEWWSWHGHRMHLDTYRNPQARVKVILFH CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEE GVGTNGRQMSMILGEQLARRGYETVAVDMPEYGMTEVARGALVRYDDWVRAGSDLIDAER CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEHHHHHCCCCHHHHHH AKDDRPIVLYGLSAGGMLTYHVAALNGKVKGIVGMTFLDQRLQQVRDETARSVFMSRVGS CCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC PMMHLTAMTPLKSMRVPMTLASKMSALVNDPDALKVWLSDRTSAGNAMTIAFLDSYMSYR CHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHHCC PAVEPEDFAVCPILLTQPAADRWTPLHLSEPFLQRVRKVPVKVVMLDNAGHYPLEQPGLS CCCCCCCCEEEEHEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCHH QMVDAIDAFYREVTAK HHHHHHHHHHHHHCCC >Mature Secondary Structure PKTYADQPVWRDMQKFLPTDFQWKDGQQPTEEWWSWHGHRMHLDTYRNPQARVKVILFH CCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEE GVGTNGRQMSMILGEQLARRGYETVAVDMPEYGMTEVARGALVRYDDWVRAGSDLIDAER CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEHHHHHCCCCHHHHHH AKDDRPIVLYGLSAGGMLTYHVAALNGKVKGIVGMTFLDQRLQQVRDETARSVFMSRVGS CCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC PMMHLTAMTPLKSMRVPMTLASKMSALVNDPDALKVWLSDRTSAGNAMTIAFLDSYMSYR CHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHHCC PAVEPEDFAVCPILLTQPAADRWTPLHLSEPFLQRVRKVPVKVVMLDNAGHYPLEQPGLS CCCCCCCCEEEEHEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCHH QMVDAIDAFYREVTAK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA