Click here to switch to the map view.

The map label for this gene is ygaY [H]

Identifier: 78065809

GI number: 78065809

Start: 1289838

End: 1291037

Strand: Reverse

Name: ygaY [H]

Synonym: Bcep18194_A4338

Alternate gene names: 78065809

Gene position: 1291037-1289838 (Counterclockwise)

Preceding gene: 78065810

Following gene: 78065807

Centisome position: 34.95

GC content: 71.42

Gene sequence:

>1200_bases
ATGTCCACCGCCTCCACCGACCGTCCGACCGACGCCGCCTCGCCCCACTATTCGCGCAGCCTGCTGTTGCTGCTCGCGAC
GATCGCGGGCGTGTCCGTCGCGAACATCTATTACAACCAGCCGCTGCTCGACAGCTTCCGCTCCGCGTTTCCCGACGGCG
CGTCGTGGATCGGCGCGGTGCCGACCGCGACGCAGCTCGGCTATGCGGCCGGCATGTTCCTGCTCGCGCCGCTCGGCGAC
CGCTTCGACCGCCGCGGTCTGATCCTGATGCAGATCGCCGGCCTGTCGGTCGCGCTGATCGTCGCGGCCACCGCGCCGTC
GCTGGCTGTGCTCGCCGTCGCGAGTCTCGCGATCGGCGTACTCGCGACCATCGCGCAACAGGCCGTGCCGTTCGCCGCCG
AAATCGCGCCGCCGGCCGAACGCGGGCATGCGGTCGGCACCGTGATGAGCGGCCTGCTGCTCGGCATCCTGCTCGCGCGG
ACGGCCGCCGGCTTCGTCGCCGAGTATTTCGGCTGGCGCGCGGTGTTCGCCGCGTCGGTTGCGGCGCTCGTCGCGCTCGC
CGCGGTGATCGTGCTGCGGCTGCCGCGCAGCTCGCCGACGTCGACGCTGTCGTACGGCAAACTGCTCGGCTCGATGTGGC
ATCTGGCGGTCGAATTGCGCGGGCTGCGCGAGGCATCGCTGACGGGTGCCGCGCTGTTCGCGGCATTCAGCGCGTTCTGG
CCCGTGCTCACGCTGCTGCTCGCCGGCGCGCCGTTCCATCTCGGCCCGCAGGCAGCCGGCCTGTTCGGGATCGTCGGTGC
GGCAGGCGCGCTCGCGGCGCCGTACGCGGGCCGCTTCGCGGACAAGCGCGGCCCGCGCGCGATCATCTCGCTCGCGATCG
CGCTGCTCGCGCTGTCGTTCGTGATCTTCGCGCTATCGGGCTCGAGCCTCGTCGGGCTCGTGATCGGCGTGATCGTGCTG
GACGTCGGCGTGCAGGCCGCGCAGATCTCGAACCAGTCGCGCATCTATGCGCTGAAGCCCGAGGCGCGCAGCCGCGTCAA
CACGGTGTACATGGTGTGCTATTTCATCGGCGGCGCACTCGGCTCGTCGGCCGGCGTCGCCGCATGGCACGCGTTCGGCT
GGATCGGGATGTGCGCAACCGGGCTGGTGTTCACCGCGCTCGGCGGCTGGTTCCACCATCGCGGCGGCCGGCGCGACTGA

Upstream 100 bases:

>100_bases
GTCGCTCCGGTATGATCGGCAGCCTCGACGGCGCCCCGCCCGCCTGCGCACCCGACGCGTGCGCCGCGCGCTGCGCCGCC
CCACTTCCGTCCGCGCAGCC

Downstream 100 bases:

>100_bases
GCGCGACCGGCCACGGCGGCGTCACGCGTCGGCGCGGGGCGCTGCCGGTTCGGCGGCAGGCGGCGGGGCGAACGCGGGTA
CCGGTTCAGCGACGGGCGGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSTASTDRPTDAASPHYSRSLLLLLATIAGVSVANIYYNQPLLDSFRSAFPDGASWIGAVPTATQLGYAAGMFLLAPLGD
RFDRRGLILMQIAGLSVALIVAATAPSLAVLAVASLAIGVLATIAQQAVPFAAEIAPPAERGHAVGTVMSGLLLGILLAR
TAAGFVAEYFGWRAVFAASVAALVALAAVIVLRLPRSSPTSTLSYGKLLGSMWHLAVELRGLREASLTGAALFAAFSAFW
PVLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALLALSFVIFALSGSSLVGLVIGVIVL
DVGVQAAQISNQSRIYALKPEARSRVNTVYMVCYFIGGALGSSAGVAAWHAFGWIGMCATGLVFTALGGWFHHRGGRRD

Sequences:

>Translated_399_residues
MSTASTDRPTDAASPHYSRSLLLLLATIAGVSVANIYYNQPLLDSFRSAFPDGASWIGAVPTATQLGYAAGMFLLAPLGD
RFDRRGLILMQIAGLSVALIVAATAPSLAVLAVASLAIGVLATIAQQAVPFAAEIAPPAERGHAVGTVMSGLLLGILLAR
TAAGFVAEYFGWRAVFAASVAALVALAAVIVLRLPRSSPTSTLSYGKLLGSMWHLAVELRGLREASLTGAALFAAFSAFW
PVLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALLALSFVIFALSGSSLVGLVIGVIVL
DVGVQAAQISNQSRIYALKPEARSRVNTVYMVCYFIGGALGSSAGVAAWHAFGWIGMCATGLVFTALGGWFHHRGGRRD
>Mature_398_residues
STASTDRPTDAASPHYSRSLLLLLATIAGVSVANIYYNQPLLDSFRSAFPDGASWIGAVPTATQLGYAAGMFLLAPLGDR
FDRRGLILMQIAGLSVALIVAATAPSLAVLAVASLAIGVLATIAQQAVPFAAEIAPPAERGHAVGTVMSGLLLGILLART
AAGFVAEYFGWRAVFAASVAALVALAAVIVLRLPRSSPTSTLSYGKLLGSMWHLAVELRGLREASLTGAALFAAFSAFWP
VLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALLALSFVIFALSGSSLVGLVIGVIVLD
VGVQAAQISNQSRIYALKPEARSRVNTVYMVCYFIGGALGSSAGVAAWHAFGWIGMCATGLVFTALGGWFHHRGGRRD

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=388, Percent_Identity=24.4845360824742, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41073; Mature: 40941

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTASTDRPTDAASPHYSRSLLLLLATIAGVSVANIYYNQPLLDSFRSAFPDGASWIGAV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCC
PTATQLGYAAGMFLLAPLGDRFDRRGLILMQIAGLSVALIVAATAPSLAVLAVASLAIGV
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LATIAQQAVPFAAEIAPPAERGHAVGTVMSGLLLGILLARTAAGFVAEYFGWRAVFAASV
HHHHHHHHCCCHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVALAAVIVLRLPRSSPTSTLSYGKLLGSMWHLAVELRGLREASLTGAALFAAFSAFW
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALLALSF
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH
VIFALSGSSLVGLVIGVIVLDVGVQAAQISNQSRIYALKPEARSRVNTVYMVCYFIGGAL
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
GSSAGVAAWHAFGWIGMCATGLVFTALGGWFHHRGGRRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STASTDRPTDAASPHYSRSLLLLLATIAGVSVANIYYNQPLLDSFRSAFPDGASWIGAV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCC
PTATQLGYAAGMFLLAPLGDRFDRRGLILMQIAGLSVALIVAATAPSLAVLAVASLAIGV
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LATIAQQAVPFAAEIAPPAERGHAVGTVMSGLLLGILLARTAAGFVAEYFGWRAVFAASV
HHHHHHHHCCCHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVALAAVIVLRLPRSSPTSTLSYGKLLGSMWHLAVELRGLREASLTGAALFAAFSAFW
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALLALSF
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH
VIFALSGSSLVGLVIGVIVLDVGVQAAQISNQSRIYALKPEARSRVNTVYMVCYFIGGAL
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
GSSAGVAAWHAFGWIGMCATGLVFTALGGWFHHRGGRRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]