| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065806
Identifier: 78065806
GI number: 78065806
Start: 1287435
End: 1287716
Strand: Reverse
Name: 78065806
Synonym: Bcep18194_A4335
Alternate gene names: NA
Gene position: 1287716-1287435 (Counterclockwise)
Preceding gene: 78065807
Following gene: 78065802
Centisome position: 34.86
GC content: 65.6
Gene sequence:
>282_bases ATGACCAACGAACGTTATTCAAGCGTCTGGGACGCAATCGAGGGCCAGCCGGCCGAAGCCGGGAACATGAAGCTGCGATC CGAGCTGATGATCGCGCTCAAGCAGCGCATCGCACAGCTCGAGCTCAGTCAGGCCCAGGCCGCGAAACAGCTGGGTGTCA CGCAGCCGCGCGTCTCCGACCTGATGCGCGGCAAGATCAACCTGTTCGGGCTCGACGCGCTGGTGAACATGGCGGCGGCC GTCGGCCTGCGCGTCGACCTCCAGGTGCGCGACTCCGCGTGA
Upstream 100 bases:
>100_bases ACGTGCTTCATTGCTTCCGGAAGCAATCGGCGCGCACGACCAGGGCCGATATCGAACTGGCCACCCGGCGCTATCGCGCG CTGACGATGGAGAGGAAAGG
Downstream 100 bases:
>100_bases CGCGTCACGTGCGACGCCCGCGATGCCCGATGCATCGCGGCACGCGCACGCGCCGCCACCGCACGCCGCGCATCGCTCAC GATCCGCCGAACCAGTTGTA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Conserved Small Protein; Phage Associated Protein; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTNERYSSVWDAIEGQPAEAGNMKLRSELMIALKQRIAQLELSQAQAAKQLGVTQPRVSDLMRGKINLFGLDALVNMAAA VGLRVDLQVRDSA
Sequences:
>Translated_93_residues MTNERYSSVWDAIEGQPAEAGNMKLRSELMIALKQRIAQLELSQAQAAKQLGVTQPRVSDLMRGKINLFGLDALVNMAAA VGLRVDLQVRDSA >Mature_92_residues TNERYSSVWDAIEGQPAEAGNMKLRSELMIALKQRIAQLELSQAQAAKQLGVTQPRVSDLMRGKINLFGLDALVNMAAAV GLRVDLQVRDSA
Specific function: Unknown
COG id: COG5606
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10169; Mature: 10038
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNERYSSVWDAIEGQPAEAGNMKLRSELMIALKQRIAQLELSQAQAAKQLGVTQPRVSD CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LMRGKINLFGLDALVNMAAAVGLRVDLQVRDSA HHHCCCCEEHHHHHHHHHHHHCCEEEEEECCCC >Mature Secondary Structure TNERYSSVWDAIEGQPAEAGNMKLRSELMIALKQRIAQLELSQAQAAKQLGVTQPRVSD CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LMRGKINLFGLDALVNMAAAVGLRVDLQVRDSA HHHCCCCEEHHHHHHHHHHHHCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA