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The map label for this gene is vdlD [H]

Identifier: 78065674

GI number: 78065674

Start: 1138008

End: 1138520

Strand: Direct

Name: vdlD [H]

Synonym: Bcep18194_A4202

Alternate gene names: 78065674

Gene position: 1138008-1138520 (Clockwise)

Preceding gene: 78065671

Following gene: 78065678

Centisome position: 30.81

GC content: 66.47

Gene sequence:

>513_bases
ATGTCCCAACCGTCCCCCGTACCGGCCGCCCTCGACCGCACCGAAACCGTATTCCGCTTCCTCGCCGAGCCGTCCTCCGT
GAACTTCGGCGGCAAGGTGCATGGCGGCGCGCTGATGAAGTGGATCGACGAGGTCGCGTATGCGTGCGCGGCCGTCTGGT
CGAGCCGCTATTGCGTGACGGTCAGCGTCGGCAACATCCGTTTCCAGCGTCCGATCATGGTCGGCAACCTGGTCGAGCTG
AAGGCGCGCGTCGTTGCGACGGGCCGTACCAGCATGCACATCCATGTGTCCGTGCATGCCGGCGATCCGAAGGGCGGCAT
GCTGCGCCAGACGACCGATTGCCTCGTCGTGTTCGTCGCGGTCGACGAGAACGGCAACCCGGTGCCGGTGCCGCCGTTCG
TGCCCGAGACCGACGAGCAGAGGGTGCTCGCGAAATATGCGGCCGACGTGCGGGCCGCGCTCGACAAGATCGTCGAGATG
AAACCGGAAGAGGTCGCGAAGGGCGCGGTCTGA

Upstream 100 bases:

>100_bases
GCCCCGGCAGCCGCGCCACACGGGGCGCTCCGCGGCGCGTTGCCGCAGTGCAACGTATAATGGCCCGATTACAGCGCCCC
TGCCGCCTGGAGCCAACAAG

Downstream 100 bases:

>100_bases
CCGCTGCGGGCGCCGCGCATCGCGCCGCGCCCGTCGTCCTGCCGTTACTGCGACCCGATCATCTGTTCGGGTCGTACCCA
CGCATCGAATTCCGCCTCGG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSQPSPVPAALDRTETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVTVSVGNIRFQRPIMVGNLVEL
KARVVATGRTSMHIHVSVHAGDPKGGMLRQTTDCLVVFVAVDENGNPVPVPPFVPETDEQRVLAKYAADVRAALDKIVEM
KPEEVAKGAV

Sequences:

>Translated_170_residues
MSQPSPVPAALDRTETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVTVSVGNIRFQRPIMVGNLVEL
KARVVATGRTSMHIHVSVHAGDPKGGMLRQTTDCLVVFVAVDENGNPVPVPPFVPETDEQRVLAKYAADVRAALDKIVEM
KPEEVAKGAV
>Mature_169_residues
SQPSPVPAALDRTETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVTVSVGNIRFQRPIMVGNLVELK
ARVVATGRTSMHIHVSVHAGDPKGGMLRQTTDCLVVFVAVDENGNPVPVPPFVPETDEQRVLAKYAADVRAALDKIVEMK
PEEVAKGAV

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528286, Length=140, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI32528284, Length=140, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI75709208, Length=140, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI32528282, Length=140, Percent_Identity=32.1428571428571, Blast_Score=70, Evalue=8e-13,
Organism=Escherichia coli, GI1787506, Length=135, Percent_Identity=34.8148148148148, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18344; Mature: 18213

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPSPVPAALDRTETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVT
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEE
VSVGNIRFQRPIMVGNLVELKARVVATGRTSMHIHVSVHAGDPKGGMLRQTTDCLVVFVA
EEECCEEEECCEEECHHHHHEEEEEEECCCEEEEEEEEECCCCCCCCEEECCCEEEEEEE
VDENGNPVPVPPFVPETDEQRVLAKYAADVRAALDKIVEMKPEEVAKGAV
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
SQPSPVPAALDRTETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVT
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEE
VSVGNIRFQRPIMVGNLVELKARVVATGRTSMHIHVSVHAGDPKGGMLRQTTDCLVVFVA
EEECCEEEECCEEECHHHHHEEEEEEECCCEEEEEEEEECCCCCCCCEEECCCEEEEEEE
VDENGNPVPVPPFVPETDEQRVLAKYAADVRAALDKIVEMKPEEVAKGAV
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]