| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is guaD [H]
Identifier: 78065601
GI number: 78065601
Start: 1059985
End: 1061301
Strand: Reverse
Name: guaD [H]
Synonym: Bcep18194_A4129
Alternate gene names: 78065601
Gene position: 1061301-1059985 (Counterclockwise)
Preceding gene: 78065602
Following gene: 78065600
Centisome position: 28.73
GC content: 68.64
Gene sequence:
>1317_bases ATGACGCAAACCGCTTTTCGTTCCCAGCTGCTGACCTTCAACGGCGACCCGGCGCAATCGAGCCAGGCCGCGAACTACGA GACCGACGGCCTCCTGATCGTCGACGACGGCAAGGTCGTCGCGGCCGGCCCGTACGCGCAGCTCGCCGCGACGCTCGCGC GCGACACGATCGTCCACGACCTGCGCGACAAGCTGATCGTGCCCGGCTTCATCGACACGCACATCCACTATCCGCAGACG GACATGATCGCGTCGCCGGCGCCGGGCCTGCTGCCGTGGCTGGACAAGTACACGTTCCCGACCGAGCGCCAGTTCGGCGA TCCCGAGCATGCGCGCGAAGTCGCCGACTTCTTCGTCGACGAACTGCTCGCCTGCGGCACGACGAGCGCGCTCGTCTACT GCACGGTGCACAAGCAGTCGGCCGATGCGCTGTTCGCGTCGAGCGACGCACGCGACCTGCGGATGATCGCGGGCAAGGTG CTGATGGACCGCAACTGCCCCGAATTCCTGCGCGATACCGCGCAATCGGGTTACGACGACAGCGCCGAGCTGATCGACCG CTGGCACGGCAAGGGCCGCCAGATGTACGCGCTCACGCCGCGCTTCGCGCCGACGTCGACCGAAGCGCAGCTCGAGGCGT GCAGCGAGCTCGCGCGCCGCCATCCGGACGTGTTCGTGCAGAGCCACGTCGCGGAAAACGTCGACGAAGTGAAATGGGTG GCCGAGCTGTTCCCCGGCCATCGCAGCTATCTCGACATCTACGACCGCTACGGTCTGCTGCGCCCGCGCGCGGTGTACGG CCACTGCATCCACCTCGACGACGAGGACCGCCGCCGGATGGCCGAGACGCGCACGGTCGTCGCACACTGCCCGACCTCGA ACTTCTTCCTCGGCAGCGGGCTGTTCGATTTCGACAAGGCCGGTGAATACGACGTGCCCGTCACGCTCGCGACCGACGTC GGCGGCGGCACGTCGTTCTCGATGCTGCAGACGATGAACGAGGCGCACAAGGTCGCGCGGCTGTCGGGCCACCACCTGAC CGCGACGCGGATGTTCTGGCTCGCGACGGCCGGCGCCGCGCAGGCACTCGACCTTACCGATACGGTCGGCACGCTCGCGC CGCGCACCGAGGCCGACTTCGTCGTGCTCGATCCGCAGGCCACGCCGCTGCTCGCGCGCCGCACGAAGCGCGCGGATTCG CTCGAGGAGCTGCTGTTCGCATTCGCACTGCTCGGCGACGACCGCGCGGTGTACCGCACCTATGCGGCCGGCAAACTCGT TCACGAGCGCGGCGCGGCACGCCGCGCGGCCGCGTAA
Upstream 100 bases:
>100_bases CACGCAGTGTGCCGCACCCGCTCGCCAGGCGCCGCCTTGCCCTCGTGCGGCGTCGCTCGTTTTCTTCTGTTCGCCTTACC TTGATGCAGGACCATTCGTC
Downstream 100 bases:
>100_bases CAGCGTTCCGGGCGCGTTTCCCGGCAGGCGCGGGCATCCGCCACCGTGCCTGCCGGGCCTCCCGTCCCGCCGGAGATTGC CGTCCGCCGATCCCACCCCG
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MTQTAFRSQLLTFNGDPAQSSQAANYETDGLLIVDDGKVVAAGPYAQLAATLARDTIVHDLRDKLIVPGFIDTHIHYPQT DMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVDELLACGTTSALVYCTVHKQSADALFASSDARDLRMIAGKV LMDRNCPEFLRDTAQSGYDDSAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACSELARRHPDVFVQSHVAENVDEVKWV AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSGLFDFDKAGEYDVPVTLATDV GGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAAQALDLTDTVGTLAPRTEADFVVLDPQATPLLARRTKRADS LEELLFAFALLGDDRAVYRTYAAGKLVHERGAARRAAA
Sequences:
>Translated_438_residues MTQTAFRSQLLTFNGDPAQSSQAANYETDGLLIVDDGKVVAAGPYAQLAATLARDTIVHDLRDKLIVPGFIDTHIHYPQT DMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVDELLACGTTSALVYCTVHKQSADALFASSDARDLRMIAGKV LMDRNCPEFLRDTAQSGYDDSAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACSELARRHPDVFVQSHVAENVDEVKWV AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSGLFDFDKAGEYDVPVTLATDV GGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAAQALDLTDTVGTLAPRTEADFVVLDPQATPLLARRTKRADS LEELLFAFALLGDDRAVYRTYAAGKLVHERGAARRAAA >Mature_437_residues TQTAFRSQLLTFNGDPAQSSQAANYETDGLLIVDDGKVVAAGPYAQLAATLARDTIVHDLRDKLIVPGFIDTHIHYPQTD MIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVDELLACGTTSALVYCTVHKQSADALFASSDARDLRMIAGKVL MDRNCPEFLRDTAQSGYDDSAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACSELARRHPDVFVQSHVAENVDEVKWVA ELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSGLFDFDKAGEYDVPVTLATDVG GGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAAQALDLTDTVGTLAPRTEADFVVLDPQATPLLARRTKRADSL EELLFAFALLGDDRAVYRTYAAGKLVHERGAARRAAA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=418, Percent_Identity=32.2966507177034, Blast_Score=199, Evalue=4e-51, Organism=Escherichia coli, GI1789249, Length=416, Percent_Identity=49.7596153846154, Blast_Score=450, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6319963, Length=402, Percent_Identity=31.0945273631841, Blast_Score=197, Evalue=3e-51, Organism=Drosophila melanogaster, GI24643849, Length=452, Percent_Identity=31.6371681415929, Blast_Score=199, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 48400; Mature: 48269
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTAFRSQLLTFNGDPAQSSQAANYETDGLLIVDDGKVVAAGPYAQLAATLARDTIVHD CCCHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHH LRDKLIVPGFIDTHIHYPQTDMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVD HHHCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ELLACGTTSALVYCTVHKQSADALFASSDARDLRMIAGKVLMDRNCPEFLRDTAQSGYDD HHHHCCCCCEEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACSELARRHPDVFVQSHVAENVDEVKWV HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSG HHHCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHEEEEECCCCCEEECCC LFDFDKAGEYDVPVTLATDVGGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHEECCCC QALDLTDTVGTLAPRTEADFVVLDPQATPLLARRTKRADSLEELLFAFALLGDDRAVYRT CEEECHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGKLVHERGAARRAAA HHHHHHHHHHCCHHHCCC >Mature Secondary Structure TQTAFRSQLLTFNGDPAQSSQAANYETDGLLIVDDGKVVAAGPYAQLAATLARDTIVHD CCHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHH LRDKLIVPGFIDTHIHYPQTDMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVD HHHCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ELLACGTTSALVYCTVHKQSADALFASSDARDLRMIAGKVLMDRNCPEFLRDTAQSGYDD HHHHCCCCCEEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACSELARRHPDVFVQSHVAENVDEVKWV HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSG HHHCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHEEEEECCCCCEEECCC LFDFDKAGEYDVPVTLATDVGGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHEECCCC QALDLTDTVGTLAPRTEADFVVLDPQATPLLARRTKRADSLEELLFAFALLGDDRAVYRT CEEECHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGKLVHERGAARRAAA HHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]