| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065599
Identifier: 78065599
GI number: 78065599
Start: 1058286
End: 1058984
Strand: Direct
Name: 78065599
Synonym: Bcep18194_A4127
Alternate gene names: NA
Gene position: 1058286-1058984 (Clockwise)
Preceding gene: 78065592
Following gene: 78065608
Centisome position: 28.65
GC content: 69.96
Gene sequence:
>699_bases ATGAAACGCGAATGGATTCAACGCGGTGCGGGCTGGGCGGCGGTGCTGTGCGTGGCACTGCTGACCGGCTGCACCAGCTA CGTGACGACCCAGGTCACGGCCTTTTCCGACTGGAGCGGCAGCGACGCGACACGCACCTATGCGTTCACGCGCACCGATG CGCAGAAGAACAGCATCGAGCAGTCGACCTACGAGCCGATCGTCGCGAACGAACTGTCCACGTATGCGTTCCGGCAGGTG CCGCAGGCGCAGGCGCGGTACCTCGTCGGGCTGACCTATGCGGTCGGCAGCGATCTCGTGACGGTGCCGCAGCCGGTCTA TTACGATCCGTGGTTTGCGCCCGGGCCGTACTGGCGGCGCGGGCCGTGGGGCCCGTGGGGGCCCTGGGGGCCGATGCCGG CCGGCTACGTCGCGCAGACGTACCAGGTGTTCGACTACACGCTCGGCATCCGCATCACCGAACGCGCGACGGGCAAGGAG GTGTACAACGTGTCCGCGCGCACGACCGGTGACAACGGCACGCTGCTGTACGCGATGCCGTTCCTCGCGCGCAGCGCGCT CGCCGATTTCCCGCTGTCGAACGGTGCGGTCCGTTCGGTCCGGCTACCGGTCGACAAGCGCGGCGGCCCGGCGGCGCCGG CCGCCAACGAGCGCGCGGTGCCGGCGGCGCCCGCTTCGGGGCCCGCCGCCACGAAGTAA
Upstream 100 bases:
>100_bases CGGGCGAACTTTTTACCGGTTCCGGGAGTCCGCGTATTATCGGCATCCCGTTACGGTTCGCGCGGTGCGACGAACGGGTG ACGGATCGAAGAGGATCAAC
Downstream 100 bases:
>100_bases CGCAGCGTCAGTCTCGGCGCGGCCGTCCGGCCGCGCCCGCCATTTTCCTCCCCGTCAGACCCCGATGCCCAGCAGCGCCA GCGCGCCGAGCACGACGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Lipoprotein Transmembrane
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKREWIQRGAGWAAVLCVALLTGCTSYVTTQVTAFSDWSGSDATRTYAFTRTDAQKNSIEQSTYEPIVANELSTYAFRQV PQAQARYLVGLTYAVGSDLVTVPQPVYYDPWFAPGPYWRRGPWGPWGPWGPMPAGYVAQTYQVFDYTLGIRITERATGKE VYNVSARTTGDNGTLLYAMPFLARSALADFPLSNGAVRSVRLPVDKRGGPAAPAANERAVPAAPASGPAATK
Sequences:
>Translated_232_residues MKREWIQRGAGWAAVLCVALLTGCTSYVTTQVTAFSDWSGSDATRTYAFTRTDAQKNSIEQSTYEPIVANELSTYAFRQV PQAQARYLVGLTYAVGSDLVTVPQPVYYDPWFAPGPYWRRGPWGPWGPWGPMPAGYVAQTYQVFDYTLGIRITERATGKE VYNVSARTTGDNGTLLYAMPFLARSALADFPLSNGAVRSVRLPVDKRGGPAAPAANERAVPAAPASGPAATK >Mature_232_residues MKREWIQRGAGWAAVLCVALLTGCTSYVTTQVTAFSDWSGSDATRTYAFTRTDAQKNSIEQSTYEPIVANELSTYAFRQV PQAQARYLVGLTYAVGSDLVTVPQPVYYDPWFAPGPYWRRGPWGPWGPWGPMPAGYVAQTYQVFDYTLGIRITERATGKE VYNVSARTTGDNGTLLYAMPFLARSALADFPLSNGAVRSVRLPVDKRGGPAAPAANERAVPAAPASGPAATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25186; Mature: 25186
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREWIQRGAGWAAVLCVALLTGCTSYVTTQVTAFSDWSGSDATRTYAFTRTDAQKNSIE CCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCHHHHHH QSTYEPIVANELSTYAFRQVPQAQARYLVGLTYAVGSDLVTVPQPVYYDPWFAPGPYWRR HHHCCCHHHHHHHHHHHHHCCHHHHHHHEEEHHHHCCCEEECCCCCEECCCCCCCCCCCC GPWGPWGPWGPMPAGYVAQTYQVFDYTLGIRITERATGKEVYNVSARTTGDNGTLLYAMP CCCCCCCCCCCCCCCHHHHHHEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEHH FLARSALADFPLSNGAVRSVRLPVDKRGGPAAPAANERAVPAAPASGPAATK HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKREWIQRGAGWAAVLCVALLTGCTSYVTTQVTAFSDWSGSDATRTYAFTRTDAQKNSIE CCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCHHHHHH QSTYEPIVANELSTYAFRQVPQAQARYLVGLTYAVGSDLVTVPQPVYYDPWFAPGPYWRR HHHCCCHHHHHHHHHHHHHCCHHHHHHHEEEHHHHCCCEEECCCCCEECCCCCCCCCCCC GPWGPWGPWGPMPAGYVAQTYQVFDYTLGIRITERATGKEVYNVSARTTGDNGTLLYAMP CCCCCCCCCCCCCCCHHHHHHEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEHH FLARSALADFPLSNGAVRSVRLPVDKRGGPAAPAANERAVPAAPASGPAATK HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA