| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065596
Identifier: 78065596
GI number: 78065596
Start: 1052848
End: 1053657
Strand: Reverse
Name: 78065596
Synonym: Bcep18194_A4124
Alternate gene names: NA
Gene position: 1053657-1052848 (Counterclockwise)
Preceding gene: 78065597
Following gene: 78065595
Centisome position: 28.52
GC content: 67.65
Gene sequence:
>810_bases ATGCGCACCTGGCGTCTCGAGCGACCGAACCTCACCGGGCAACTGGACGTATCGCGTGCGACGCGCCTCGTCGCCGCGAT CGGCGACAGCGAACCAAACGCATTCGCAGCCGAAGTGCTGAAGCTGTTCGACGACGCGCTGTCGGTCACGCAATGCACGA TCTTCGCGTACGAGTTCGGCAACCGCCCGCGCACGCTATCCGTCGCCGACCATCGCGGCGGCCGTTACCTGCGCGACGTC GCCGACACCTACGCGCGACACTTCTACGCGCTCGACGGCAACCAGAAGATCGTGTCGAGCGCGCATCGCGGCGCGCGCCG CCACGACCTGCTGCTGCACCAGCAGGCCGGCGACGAGATCGATCATGAAGCGTATCGCGCGGCCTGCTACCGCGGGCCAG ACGTGTCCGACCGGCTGTCGCTGCTGATGCAGCCCAACGATGCGAGCTGGATGTCGATCAACCTGTACCGTGCGCATCGC AGCGGTGCGTTCCAGCCGCGTGAGATCGCGGAAATCGAAGCGCTCGCGCCGCTGATCGCGCAGGCCGCGAAGCATCACTA CGCGCTCGCCGGTGCGGCGCAGATCGGGATCCCGCAACTGATGCTCGCGCGGCTACGCCGCGCATGCCCGGCGCTGTCCA AGCGTGAACTCGACGTGCTGCGCGGCGTGCTCGAAGGCCAGACCGCGCACGAGATCGGCGAGACGATCGGCGTGAAGGCG TCGAGTGTCGTCACGTACCAGAAACGCGCATACCGGCGCCTGGGCATCTCGAGCCAGCGCCAGCTGTTCGCGCTCTGCCT GCAGCCCTGA
Upstream 100 bases:
>100_bases GCCTTCTCTCCGCGTCCGCTCCGCTTGCGGGCATCACCCGACTCCCGCGCCGTACCCCGCCGATTACAATCGACGAACCA CTCCGCCCTTTCCGAGCATC
Downstream 100 bases:
>100_bases ACCAACCGGGCCGGTGATGACCGAATCCGGGTAAATCCCGGTCGGCTTGCTGTACCCGGAATGGGGACAGCGGATTTCCG CCCGGCTTCCATACTGCTTC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; LuxR Superfamily Regulatory Protein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRTWRLERPNLTGQLDVSRATRLVAAIGDSEPNAFAAEVLKLFDDALSVTQCTIFAYEFGNRPRTLSVADHRGGRYLRDV ADTYARHFYALDGNQKIVSSAHRGARRHDLLLHQQAGDEIDHEAYRAACYRGPDVSDRLSLLMQPNDASWMSINLYRAHR SGAFQPREIAEIEALAPLIAQAAKHHYALAGAAQIGIPQLMLARLRRACPALSKRELDVLRGVLEGQTAHEIGETIGVKA SSVVTYQKRAYRRLGISSQRQLFALCLQP
Sequences:
>Translated_269_residues MRTWRLERPNLTGQLDVSRATRLVAAIGDSEPNAFAAEVLKLFDDALSVTQCTIFAYEFGNRPRTLSVADHRGGRYLRDV ADTYARHFYALDGNQKIVSSAHRGARRHDLLLHQQAGDEIDHEAYRAACYRGPDVSDRLSLLMQPNDASWMSINLYRAHR SGAFQPREIAEIEALAPLIAQAAKHHYALAGAAQIGIPQLMLARLRRACPALSKRELDVLRGVLEGQTAHEIGETIGVKA SSVVTYQKRAYRRLGISSQRQLFALCLQP >Mature_269_residues MRTWRLERPNLTGQLDVSRATRLVAAIGDSEPNAFAAEVLKLFDDALSVTQCTIFAYEFGNRPRTLSVADHRGGRYLRDV ADTYARHFYALDGNQKIVSSAHRGARRHDLLLHQQAGDEIDHEAYRAACYRGPDVSDRLSLLMQPNDASWMSINLYRAHR SGAFQPREIAEIEALAPLIAQAAKHHYALAGAAQIGIPQLMLARLRRACPALSKRELDVLRGVLEGQTAHEIGETIGVKA SSVVTYQKRAYRRLGISSQRQLFALCLQP
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29986; Mature: 29986
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTWRLERPNLTGQLDVSRATRLVAAIGDSEPNAFAAEVLKLFDDALSVTQCTIFAYEFG CCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC NRPRTLSVADHRGGRYLRDVADTYARHFYALDGNQKIVSSAHRGARRHDLLLHQQAGDEI CCCCEEEECCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCC DHEAYRAACYRGPDVSDRLSLLMQPNDASWMSINLYRAHRSGAFQPREIAEIEALAPLIA HHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH QAAKHHYALAGAAQIGIPQLMLARLRRACPALSKRELDVLRGVLEGQTAHEIGETIGVKA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCH SSVVTYQKRAYRRLGISSQRQLFALCLQP HHHHHHHHHHHHHCCCCCHHHHHHHCCCC >Mature Secondary Structure MRTWRLERPNLTGQLDVSRATRLVAAIGDSEPNAFAAEVLKLFDDALSVTQCTIFAYEFG CCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC NRPRTLSVADHRGGRYLRDVADTYARHFYALDGNQKIVSSAHRGARRHDLLLHQQAGDEI CCCCEEEECCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCC DHEAYRAACYRGPDVSDRLSLLMQPNDASWMSINLYRAHRSGAFQPREIAEIEALAPLIA HHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH QAAKHHYALAGAAQIGIPQLMLARLRRACPALSKRELDVLRGVLEGQTAHEIGETIGVKA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCH SSVVTYQKRAYRRLGISSQRQLFALCLQP HHHHHHHHHHHHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA