| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065572
Identifier: 78065572
GI number: 78065572
Start: 1029475
End: 1030647
Strand: Direct
Name: 78065572
Synonym: Bcep18194_A4100
Alternate gene names: NA
Gene position: 1029475-1030647 (Clockwise)
Preceding gene: 78065571
Following gene: 78065573
Centisome position: 27.87
GC content: 60.78
Gene sequence:
>1173_bases TTGGCAGACAATCTGAAGGCAACGGCGCAGACCAACCCGGAATCGAAGGTCTGCGTGGACGCGCAGTGCAATTGCAACAT CATCTGGTCGCTCGCGCAGCAGTTCTCCATGCGGCAGATCGTGACGAATGCGCGTTCGCACAATCACATGCCCGACTATC GCGAAGGCGAAGGGCACGTGTCCGGGCAGCAGGTCGAGACCCAGGCGCCGGCGTTCGTCAGCGACCCGGAGGTCAGGGCT CGCCGTATCGCCGCCGCCTATGCGCGCGTGTTTCTCGAACAGTTCCACCTGGGCGATACGAGCAAGGTCGGCCGCTTCTA CTGGCTGGGACTCGGTGCATTCGCGTCGAAGCAGGTCGCCGCGACGCTCGCGCTGTGGCAGGTGCGATATGCCGGGCGCT GGACCGAATTGCGGGCGGGGCTGGGCCGCGGCAATCTCTGGCTCTTCAACGACGTGCTGGCGTGGTTCTACGCGTATGCC GCCGGGTCCGATACGTTCGACAAGTGCGTGCAATCGCGTGACAGCACCCAGTTCGTCAAGCAGGTGGCCGTCAACTTCAC GCGACAGGTTGGGTACGACGAAGCGATCGACAAGGTGCCGTTCGAAATCGACGGAGAAACCGGCGCCAAGCAAAAGCAGC TGGGCTATCTCAAGTCCACGTCGATCATTGTTGCAGGATTCAACAAGATAAAGCAGTGGGAAGCGGGCGATGAGCAAAGC CGGGCGATCTGGGCTTTCCAGCACCTGGTTTTGATTGCGCAACACGAGCAGGGCGAGGTGTTGCAGGGGCTGATCTACGA AAACAAGAAGTTCAAACGATGGCTTGGCGTGCAGCGCGGCGCACTGGCGTCTTCGGACGATACGGCGATCAACAACTCGG TCGAATCGATGCAGCACGGCCTGTCGGACGGTTCCGAGATTGCGCTGGCACCGGTCATTCGCGCGCTGGTTCCCAGCCTT CAACTCGTGCTCACGTCCGATGACAAGACGGACAGCATCGAATTCAGGTCGGATGCGCCGGACCGCCTGGTTCTGGAGGA CTATCAGAAGCGCATGGACTGGATCCAGACGGCAGCAACGAAGTACGACGGGTTGATGCAGGGGCCCAGGAGGCAAGTCA TGCTCGATTATCTCGGAACGATCAAAAGCTGGGGCGACAGACCCGATACCTGA
Upstream 100 bases:
>100_bases GAAAATGCGGAGTTCCAGTTGCACTGGGACGACTTTGCAGCGGCGTCCGACCGCGCAGGTGCGTAACGGAACACGGGAAC TCGACTAGGAGCGGAAGGCT
Downstream 100 bases:
>100_bases TGAAAAAGACTCATTTCTTTGTACTGATCCTCGGGGCGCTCCTGCTGGGCGTCGTACTCGCATCGCACAACGGGAATGCC CGCTCAACCCTCGACAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MADNLKATAQTNPESKVCVDAQCNCNIIWSLAQQFSMRQIVTNARSHNHMPDYREGEGHVSGQQVETQAPAFVSDPEVRA RRIAAAYARVFLEQFHLGDTSKVGRFYWLGLGAFASKQVAATLALWQVRYAGRWTELRAGLGRGNLWLFNDVLAWFYAYA AGSDTFDKCVQSRDSTQFVKQVAVNFTRQVGYDEAIDKVPFEIDGETGAKQKQLGYLKSTSIIVAGFNKIKQWEAGDEQS RAIWAFQHLVLIAQHEQGEVLQGLIYENKKFKRWLGVQRGALASSDDTAINNSVESMQHGLSDGSEIALAPVIRALVPSL QLVLTSDDKTDSIEFRSDAPDRLVLEDYQKRMDWIQTAATKYDGLMQGPRRQVMLDYLGTIKSWGDRPDT
Sequences:
>Translated_390_residues MADNLKATAQTNPESKVCVDAQCNCNIIWSLAQQFSMRQIVTNARSHNHMPDYREGEGHVSGQQVETQAPAFVSDPEVRA RRIAAAYARVFLEQFHLGDTSKVGRFYWLGLGAFASKQVAATLALWQVRYAGRWTELRAGLGRGNLWLFNDVLAWFYAYA AGSDTFDKCVQSRDSTQFVKQVAVNFTRQVGYDEAIDKVPFEIDGETGAKQKQLGYLKSTSIIVAGFNKIKQWEAGDEQS RAIWAFQHLVLIAQHEQGEVLQGLIYENKKFKRWLGVQRGALASSDDTAINNSVESMQHGLSDGSEIALAPVIRALVPSL QLVLTSDDKTDSIEFRSDAPDRLVLEDYQKRMDWIQTAATKYDGLMQGPRRQVMLDYLGTIKSWGDRPDT >Mature_389_residues ADNLKATAQTNPESKVCVDAQCNCNIIWSLAQQFSMRQIVTNARSHNHMPDYREGEGHVSGQQVETQAPAFVSDPEVRAR RIAAAYARVFLEQFHLGDTSKVGRFYWLGLGAFASKQVAATLALWQVRYAGRWTELRAGLGRGNLWLFNDVLAWFYAYAA GSDTFDKCVQSRDSTQFVKQVAVNFTRQVGYDEAIDKVPFEIDGETGAKQKQLGYLKSTSIIVAGFNKIKQWEAGDEQSR AIWAFQHLVLIAQHEQGEVLQGLIYENKKFKRWLGVQRGALASSDDTAINNSVESMQHGLSDGSEIALAPVIRALVPSLQ LVLTSDDKTDSIEFRSDAPDRLVLEDYQKRMDWIQTAATKYDGLMQGPRRQVMLDYLGTIKSWGDRPDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43757; Mature: 43626
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNLKATAQTNPESKVCVDAQCNCNIIWSLAQQFSMRQIVTNARSHNHMPDYREGEGHV CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SGQQVETQAPAFVSDPEVRARRIAAAYARVFLEQFHLGDTSKVGRFYWLGLGAFASKQVA CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHH ATLALWQVRYAGRWTELRAGLGRGNLWLFNDVLAWFYAYAAGSDTFDKCVQSRDSTQFVK HHHHHHHHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH QVAVNFTRQVGYDEAIDKVPFEIDGETGAKQKQLGYLKSTSIIVAGFNKIKQWEAGDEQS HHHHHHHHHCCHHHHHHCCCCEECCCCCCCHHHHCCHHCCCEEEECCHHHHHCCCCCHHH RAIWAFQHLVLIAQHEQGEVLQGLIYENKKFKRWLGVQRGALASSDDTAINNSVESMQHG HHHHHHHHHHHEEECCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC LSDGSEIALAPVIRALVPSLQLVLTSDDKTDSIEFRSDAPDRLVLEDYQKRMDWIQTAAT CCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH KYDGLMQGPRRQVMLDYLGTIKSWGDRPDT HHHHHHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADNLKATAQTNPESKVCVDAQCNCNIIWSLAQQFSMRQIVTNARSHNHMPDYREGEGHV CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SGQQVETQAPAFVSDPEVRARRIAAAYARVFLEQFHLGDTSKVGRFYWLGLGAFASKQVA CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHH ATLALWQVRYAGRWTELRAGLGRGNLWLFNDVLAWFYAYAAGSDTFDKCVQSRDSTQFVK HHHHHHHHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH QVAVNFTRQVGYDEAIDKVPFEIDGETGAKQKQLGYLKSTSIIVAGFNKIKQWEAGDEQS HHHHHHHHHCCHHHHHHCCCCEECCCCCCCHHHHCCHHCCCEEEECCHHHHHCCCCCHHH RAIWAFQHLVLIAQHEQGEVLQGLIYENKKFKRWLGVQRGALASSDDTAINNSVESMQHG HHHHHHHHHHHEEECCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC LSDGSEIALAPVIRALVPSLQLVLTSDDKTDSIEFRSDAPDRLVLEDYQKRMDWIQTAAT CCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH KYDGLMQGPRRQVMLDYLGTIKSWGDRPDT HHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA