| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fabG [H]
Identifier: 78065504
GI number: 78065504
Start: 958091
End: 958861
Strand: Direct
Name: fabG [H]
Synonym: Bcep18194_A4032
Alternate gene names: 78065504
Gene position: 958091-958861 (Clockwise)
Preceding gene: 78065503
Following gene: 78065505
Centisome position: 25.94
GC content: 69.13
Gene sequence:
>771_bases ATGTCCGACAGAGTGGCCATCGTGACCGGCGCGAGCCAGGGGATCGGCCGTTCGACCGCGGTCCGGCTCGCACGGGATTT CGACGCGATCACGCTCGTCGCGCGCAACCGCGCGAATCTCGAGCAGACTGCGATCGACGTGAAAGCGGCCGGTGCCGCGT GTCTCGTGATTGACGTCGATCTTGCCGCGCCGGAGGCGGCGCAGCGCGTGGTCGACGACACACTCGGCGCGTTCGGCCGG ATCGACGCGCTGCTGAACATCGCGGGCGCGGTCCCGCAGATCGACGTGTTCGAGATGACCGACGCGCAGTGGGAGCAAGG CCTGGCGCTGAAGCTGCACGGCGCGCGGCGCCTGACGATTGCCGCGTGGCCGTCGCTGAAGGCCAGCGCGGGCTCGGTCG TGCTGATGTCCGGCAACTCGGCGCTGTTTCCGAAGGCGCCGTATGCGGCGGTCGGCACGATCAACGCGGCGATCATCGCG CTCGCGAAGGCATTCTCCGATCGCGGCATCACCGATGGCGTACAGGTCAACAGCGTACTGCCGGGGCCGGTGATGACGGG CCGCCGGCGTTCGTACCTCGAGCATTGGGCGCCGCTGCACGGCATGAGCGTCGACGAGGCGACGGCCCGGTTTCCGGTCG ATGCGGGCATCGCACGGTACGGCACGCCGGAGGAGATCGCGGAACTGATCGCGTTCGTCGTGTCGCCGGCCGCGCACTGG ATGACGGGTTCGGCGCTGCGGATGGACGGCGGGGAAGTGAAGTCGGTCTGA
Upstream 100 bases:
>100_bases GACACTGGCCATTTCGCGCTGGAAACGCATGCGGCGGAGATCGCCGAGGCGATGTCGGCATTCCTCGTTCGCTGATCCGT TCCGACCCAGGAGAAACATC
Downstream 100 bases:
>100_bases TGTCGAGGTTCGCCATGGGCGAACCCCGTTTCGTTTCCGCACCTGAACGTTACTGCTGACTGCGATCCGCCGATGGCTGC AGTGTTCACGCGAATCAGGC
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSDRVAIVTGASQGIGRSTAVRLARDFDAITLVARNRANLEQTAIDVKAAGAACLVIDVDLAAPEAAQRVVDDTLGAFGR IDALLNIAGAVPQIDVFEMTDAQWEQGLALKLHGARRLTIAAWPSLKASAGSVVLMSGNSALFPKAPYAAVGTINAAIIA LAKAFSDRGITDGVQVNSVLPGPVMTGRRRSYLEHWAPLHGMSVDEATARFPVDAGIARYGTPEEIAELIAFVVSPAAHW MTGSALRMDGGEVKSV
Sequences:
>Translated_256_residues MSDRVAIVTGASQGIGRSTAVRLARDFDAITLVARNRANLEQTAIDVKAAGAACLVIDVDLAAPEAAQRVVDDTLGAFGR IDALLNIAGAVPQIDVFEMTDAQWEQGLALKLHGARRLTIAAWPSLKASAGSVVLMSGNSALFPKAPYAAVGTINAAIIA LAKAFSDRGITDGVQVNSVLPGPVMTGRRRSYLEHWAPLHGMSVDEATARFPVDAGIARYGTPEEIAELIAFVVSPAAHW MTGSALRMDGGEVKSV >Mature_255_residues SDRVAIVTGASQGIGRSTAVRLARDFDAITLVARNRANLEQTAIDVKAAGAACLVIDVDLAAPEAAQRVVDDTLGAFGRI DALLNIAGAVPQIDVFEMTDAQWEQGLALKLHGARRLTIAAWPSLKASAGSVVLMSGNSALFPKAPYAAVGTINAAIIAL AKAFSDRGITDGVQVNSVLPGPVMTGRRRSYLEHWAPLHGMSVDEATARFPVDAGIARYGTPEEIAELIAFVVSPAAHWM TGSALRMDGGEVKSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=25.5813953488372, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=25.296442687747, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=24.3027888446215, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=25, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI10190704, Length=259, Percent_Identity=25.8687258687259, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=25.668449197861, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=27.2, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI59889578, Length=214, Percent_Identity=31.3084112149533, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=27.5590551181102, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=25.2918287937743, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787335, Length=257, Percent_Identity=29.5719844357977, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=25.8964143426295, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787905, Length=258, Percent_Identity=22.4806201550388, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=21.3178294573643, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=23.8095238095238, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71994604, Length=257, Percent_Identity=33.852140077821, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=31.25, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=32.089552238806, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=32.0610687022901, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=25.6916996047431, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=30.1115241635688, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=29.4776119402985, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=30.9433962264151, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562904, Length=276, Percent_Identity=28.6231884057971, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17560332, Length=270, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=24.3027888446215, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=29.6577946768061, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17538480, Length=276, Percent_Identity=27.536231884058, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=29.7709923664122, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17531453, Length=272, Percent_Identity=28.3088235294118, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562990, Length=270, Percent_Identity=29.2592592592593, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17565030, Length=272, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=30.3030303030303, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=27.2388059701493, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=28.6259541984733, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17568967, Length=191, Percent_Identity=26.1780104712042, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=25.0965250965251, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17544670, Length=277, Percent_Identity=26.7148014440433, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17563726, Length=269, Percent_Identity=27.5092936802974, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=24.609375, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=23.3201581027668, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=25.6916996047431, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=28.2352941176471, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322861, Length=189, Percent_Identity=23.8095238095238, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=35.3174603174603, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI28571526, Length=262, Percent_Identity=30.5343511450382, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=31.9066147859922, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI24644339, Length=259, Percent_Identity=26.2548262548263, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=24.609375, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=27.4509803921569, Blast_Score=86, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26771; Mature: 26640
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRVAIVTGASQGIGRSTAVRLARDFDAITLVARNRANLEQTAIDVKAAGAACLVIDVD CCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHEEEECCCCEEEEEEEC LAAPEAAQRVVDDTLGAFGRIDALLNIAGAVPQIDVFEMTDAQWEQGLALKLHGARRLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCEEEECCCEEEEE AAWPSLKASAGSVVLMSGNSALFPKAPYAAVGTINAAIIALAKAFSDRGITDGVQVNSVL EECCCCCCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC PGPVMTGRRRSYLEHWAPLHGMSVDEATARFPVDAGIARYGTPEEIAELIAFVVSPAAHW CCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHH MTGSALRMDGGEVKSV HCCCEEEECCCCCCCC >Mature Secondary Structure SDRVAIVTGASQGIGRSTAVRLARDFDAITLVARNRANLEQTAIDVKAAGAACLVIDVD CCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHEEEECCCCEEEEEEEC LAAPEAAQRVVDDTLGAFGRIDALLNIAGAVPQIDVFEMTDAQWEQGLALKLHGARRLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCEEEECCCEEEEE AAWPSLKASAGSVVLMSGNSALFPKAPYAAVGTINAAIIALAKAFSDRGITDGVQVNSVL EECCCCCCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC PGPVMTGRRRSYLEHWAPLHGMSVDEATARFPVDAGIARYGTPEEIAELIAFVVSPAAHW CCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHH MTGSALRMDGGEVKSV HCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]