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The map label for this gene is ureD [H]

Identifier: 78065481

GI number: 78065481

Start: 934282

End: 935157

Strand: Reverse

Name: ureD [H]

Synonym: Bcep18194_A4009

Alternate gene names: 78065481

Gene position: 935157-934282 (Counterclockwise)

Preceding gene: 78065482

Following gene: 78065480

Centisome position: 25.31

GC content: 72.15

Gene sequence:

>876_bases
ATGTCCGCCCCCGATTCCCGTGCCCCGCTGTCCCGCCCCGCCGTCGCCAAGTCGTGGCACGGCCGCCTCGAACTCGGCTT
CGAACGGCACGGCATGCGCACGACGCTCGCGCACCGTCTGCACGACGGCCCGCTGCGCGTGCAGCGCCCGCTGTATCCGG
AAGGCGACGCGATCTGCCACGCGGTGATCGTGCACCCGCCGGGCGGCGTCGCCGGCGGCGACCGGCTCGACATCGACATC
GCGCTCGGCGACGGCACGCATGCGGTGCTGACGACACCCGGCGCGACCAAGTGGTACAAGTCGAACGGGCTGGACGCGAC
ACAGCGCATCGGCATCACGGTCGGCGAACACGCGAAACTCGACTGGCTGCCGCAGAACAACCTGTTCTTCGACGCGGCGC
ATGCTTCGCTCGACTTCACGGTAAAACTCGGCACGGGTGCGACTGCGATCGGCTGGGACGCGTCGCAGCTCGGCCGGCAG
GCGGCCGGCGAAACCTGGTCGGCGGGCCGCGTCGCGTCGACCTCCGCGCTCGTCGATGCCGACGGCCGGCCGCTATGGAC
CGAACGCGCGCTGCTCGATGCGCACGACCCGCTGCGCGGCGCGCTGCAGGGTCTCGCCGGCTTTCCCGCGTACGGCACGC
TGTGGGCGGCCGGCGCCGCATGCGACGCCGCACTCGCGGAATCGCTCGCCGCGCGGATGCCGTTCGATGCCACGCTGCGC
GCGGGCGCGACCTGCGTGACGCCGGGCGTCGTGCTCGTCCGCGCGCTGTCGACGTCGATGGAAGCGCTGCAACGCCACTT
CACCGACTGCTGGCTGCATCTGCGGCCGATCGTGCACGGTGTCGACGCACGGCCGCTGCGCCTCTGGCAAACCTGA

Upstream 100 bases:

>100_bases
GCCTGAGCGTAGCGTTGCAGCCTCCGGCAACGCCGGTACCGAAGCGTATATTGTTGCGGTAGCATCCTCGTTCCCCGCGC
CCGTCCCCTGCTTCCCGCCG

Downstream 100 bases:

>100_bases
GCGCGGTCGCGCCACGCACCGTTTCGGCGCAGCGTCGCGACCGGCGCTGCACATTGCCCATGCATCGCGCACCACGAGCG
CGCATCGCACGGCGTTCCAT

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSAPDSRAPLSRPAVAKSWHGRLELGFERHGMRTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDI
ALGDGTHAVLTTPGATKWYKSNGLDATQRIGITVGEHAKLDWLPQNNLFFDAAHASLDFTVKLGTGATAIGWDASQLGRQ
AAGETWSAGRVASTSALVDADGRPLWTERALLDAHDPLRGALQGLAGFPAYGTLWAAGAACDAALAESLAARMPFDATLR
AGATCVTPGVVLVRALSTSMEALQRHFTDCWLHLRPIVHGVDARPLRLWQT

Sequences:

>Translated_291_residues
MSAPDSRAPLSRPAVAKSWHGRLELGFERHGMRTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDI
ALGDGTHAVLTTPGATKWYKSNGLDATQRIGITVGEHAKLDWLPQNNLFFDAAHASLDFTVKLGTGATAIGWDASQLGRQ
AAGETWSAGRVASTSALVDADGRPLWTERALLDAHDPLRGALQGLAGFPAYGTLWAAGAACDAALAESLAARMPFDATLR
AGATCVTPGVVLVRALSTSMEALQRHFTDCWLHLRPIVHGVDARPLRLWQT
>Mature_290_residues
SAPDSRAPLSRPAVAKSWHGRLELGFERHGMRTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDIA
LGDGTHAVLTTPGATKWYKSNGLDATQRIGITVGEHAKLDWLPQNNLFFDAAHASLDFTVKLGTGATAIGWDASQLGRQA
AGETWSAGRVASTSALVDADGRPLWTERALLDAHDPLRGALQGLAGFPAYGTLWAAGAACDAALAESLAARMPFDATLRA
GATCVTPGVVLVRALSTSMEALQRHFTDCWLHLRPIVHGVDARPLRLWQT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 30981; Mature: 30850

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPDSRAPLSRPAVAKSWHGRLELGFERHGMRTTLAHRLHDGPLRVQRPLYPEGDAICH
CCCCCCCCCCCCCCHHHCCCCCEEECHHHCCHHHHHHHHHCCCCCEECCCCCCCCCCEEE
AVIVHPPGGVAGGDRLDIDIALGDGTHAVLTTPGATKWYKSNGLDATQRIGITVGEHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHEECEEECCCCEE
DWLPQNNLFFDAAHASLDFTVKLGTGATAIGWDASQLGRQAAGETWSAGRVASTSALVDA
EECCCCCEEEEEECCCEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCEECCCEEEEC
DGRPLWTERALLDAHDPLRGALQGLAGFPAYGTLWAAGAACDAALAESLAARMPFDATLR
CCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
AGATCVTPGVVLVRALSTSMEALQRHFTDCWLHLRPIVHGVDARPLRLWQT
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure 
SAPDSRAPLSRPAVAKSWHGRLELGFERHGMRTTLAHRLHDGPLRVQRPLYPEGDAICH
CCCCCCCCCCCCCHHHCCCCCEEECHHHCCHHHHHHHHHCCCCCEECCCCCCCCCCEEE
AVIVHPPGGVAGGDRLDIDIALGDGTHAVLTTPGATKWYKSNGLDATQRIGITVGEHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHEECEEECCCCEE
DWLPQNNLFFDAAHASLDFTVKLGTGATAIGWDASQLGRQAAGETWSAGRVASTSALVDA
EECCCCCEEEEEECCCEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCEECCCEEEEC
DGRPLWTERALLDAHDPLRGALQGLAGFPAYGTLWAAGAACDAALAESLAARMPFDATLR
CCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
AGATCVTPGVVLVRALSTSMEALQRHFTDCWLHLRPIVHGVDARPLRLWQT
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA