| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065420
Identifier: 78065420
GI number: 78065420
Start: 867788
End: 868378
Strand: Direct
Name: 78065420
Synonym: Bcep18194_A3946
Alternate gene names: NA
Gene position: 867788-868378 (Clockwise)
Preceding gene: 78065419
Following gene: 78065421
Centisome position: 23.49
GC content: 69.54
Gene sequence:
>591_bases ATGACCGCCGATCCCGTGACTGTCGCGCAGGCGCATTTCGACCACGTCCGCTCGTACCGCGCGACGATCCGCTCGTCCGC GCGCAGCGGCGAGCACACTGAAATCCGCTACGCGTACCTGAAACCGGGCTTCGTCCGGATGGATTTCGTGTCGCCGCATC ACGGCGCGGTGCTCGCCTACGATCCCGGCGACGGCAAGGTGCGGCTGCGTCCGTTCGGTGCGCATGCACCGCCCGCGCTG ACGCTGTCGCCGTCCAATCCGCTCGTGCGCGACCGCAGCGGCCACCGGGTCGACCGGTCGGACGTCGGCGAACTGCTGCG CAACGTCCATGCGCTGCAGGAGGGCGGCGCGACGGTGACCGAAGGCGAGGAGGCCGTCGGCGGCCGGACCGCGCTGCGCG TGTCGGTCACGGGCGCCCCCGCGCATGTGGTCGACGGCGTGCATCGCTACCGGCTGTGGCTGGATACCGAGGATGGCTTT CCGCTGAAGGTCGTCAGCTTCGCGGACGATGACGACGTGCCGCTCGAAACCGTGACGCTCGACGACGTCGAGATCGACGT CGCGTTTCCCGAACGCTTCTTCGCGCCCTGA
Upstream 100 bases:
>100_bases TTTTCAGGAGCCATCGCGAGCGCGGGATGGAAGGCGTGCTCGATGTCGAGGCGGCGCCGTGATCGCCGCGTTGCTGGCCG CGAGCCTGATAGGAGCGAGC
Downstream 100 bases:
>100_bases GCGGTGCGCTGACTCATGCCCGTGACGGGCATGCCGGAGGCTGCATGGCGGAATACCGGTTCTCGACGACCTGGCGCGTG GACGCGCCGCTCGCGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTADPVTVAQAHFDHVRSYRATIRSSARSGEHTEIRYAYLKPGFVRMDFVSPHHGAVLAYDPGDGKVRLRPFGAHAPPAL TLSPSNPLVRDRSGHRVDRSDVGELLRNVHALQEGGATVTEGEEAVGGRTALRVSVTGAPAHVVDGVHRYRLWLDTEDGF PLKVVSFADDDDVPLETVTLDDVEIDVAFPERFFAP
Sequences:
>Translated_196_residues MTADPVTVAQAHFDHVRSYRATIRSSARSGEHTEIRYAYLKPGFVRMDFVSPHHGAVLAYDPGDGKVRLRPFGAHAPPAL TLSPSNPLVRDRSGHRVDRSDVGELLRNVHALQEGGATVTEGEEAVGGRTALRVSVTGAPAHVVDGVHRYRLWLDTEDGF PLKVVSFADDDDVPLETVTLDDVEIDVAFPERFFAP >Mature_195_residues TADPVTVAQAHFDHVRSYRATIRSSARSGEHTEIRYAYLKPGFVRMDFVSPHHGAVLAYDPGDGKVRLRPFGAHAPPALT LSPSNPLVRDRSGHRVDRSDVGELLRNVHALQEGGATVTEGEEAVGGRTALRVSVTGAPAHVVDGVHRYRLWLDTEDGFP LKVVSFADDDDVPLETVTLDDVEIDVAFPERFFAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21432; Mature: 21301
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADPVTVAQAHFDHVRSYRATIRSSARSGEHTEIRYAYLKPGFVRMDFVSPHHGAVLAY CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEE DPGDGKVRLRPFGAHAPPALTLSPSNPLVRDRSGHRVDRSDVGELLRNVHALQEGGATVT ECCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE EGEEAVGGRTALRVSVTGAPAHVVDGVHRYRLWLDTEDGFPLKVVSFADDDDVPLETVTL CCCHHCCCCEEEEEEECCCCHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEE DDVEIDVAFPERFFAP CCEEEEEECCHHHCCC >Mature Secondary Structure TADPVTVAQAHFDHVRSYRATIRSSARSGEHTEIRYAYLKPGFVRMDFVSPHHGAVLAY CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEE DPGDGKVRLRPFGAHAPPALTLSPSNPLVRDRSGHRVDRSDVGELLRNVHALQEGGATVT ECCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE EGEEAVGGRTALRVSVTGAPAHVVDGVHRYRLWLDTEDGFPLKVVSFADDDDVPLETVTL CCCHHCCCCEEEEEEECCCCHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEE DDVEIDVAFPERFFAP CCEEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA