| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065406
Identifier: 78065406
GI number: 78065406
Start: 849251
End: 851341
Strand: Direct
Name: 78065406
Synonym: Bcep18194_A3932
Alternate gene names: NA
Gene position: 849251-851341 (Clockwise)
Preceding gene: 78065405
Following gene: 78065407
Centisome position: 22.99
GC content: 70.68
Gene sequence:
>2091_bases ATGACGAGGCTCGGGTGGGGCAGGCGGATGGTTTTCGGCGCGGCGCTGGCCGCGGTCGCGATACTCGGCGCCTGTAACGG CGACGAGTCGGCCGAGCGCAACCGGTTGCCCGGTTTCGTGTCCGGCAGCGTGCGCACGACAGCCTATGACGGCGCGAGCG ACGACCTGCTCACGGCCGGCCTCGGCAAGACGGGCCTCGGCTCGGCGAGCGCCCCCGGCTTTGCGAATGCCGCCCGCCCG ACGAGCGCCGAGCTGCGCCGTCTCGCGATCTGGTCGAACTACCGCGCGCTCGTCGACATGAGCGCAAACGGCGGCTACGG CCGCTTCTGGGGGCCTAACGTCGACCTCGACGGCAACGACACGCTCGGCGAAGGCAAGATCCCCGGCACCGAATATCTCG CGTACTCCGACGATGGCAGCGGTAGCAAGAACGTCACGCTGCTCGTGCAGGTGCCCGCCGGCTTCAATCCCGCGCAGCCG TGCATCGTCACCGCGACGTCGTCGGGCTCGCGCGGCGTGTACGGCGCGATTTCCGCAGCCGGCGAATGGGCGCTCAAGCG CGGCTGCGCGGTTGCCTACAACGACAAGGGCGGTGGCAACGGCGCGCACGAACTCATGTCGGACACCATCACGCTGATCG ACGGCACGCTCGCCAACGCGGTGCTGGCCGGCACCTCGAGCCTGTTCACCGCGAACGTCACCAGCGGCGATCTCGCGACG TTCAATTCCCGCTTCCCGAACCGCTATGCGTTCAAGCACGCGCATTCGCAGCAGAATCCCGAGCAGGACTGGGGGCACGT GACGCTGCAGTCGGTCGAGTTCGCGTACTGGGCGCTCAACGAGCAGTTCGGACCGCTGATCGACGGTTCGCGTCACGGCG TGCGCTATCGCGCGGGCGACATCATGACGATTGCCGCGTCGGTCAGCAACGGCGGCGGCGCGTCGCTCGCGGCGGCCGAG CAGGACACCCGCGGCTGGATCACCGCGGTCGTGGTCGGCGAGCCGCAGATCAACGTGCGGATGGCGCCGAACGTGGTCGT GCGCTCGGGCGGCCAGCCCGTGCCGTCGTTCGGCCGGCCGCTGGCCGACTACGCGACGCTCGCGAACCTGCTGGAGCCGT GTGCGGCCGCGTCGGCGTCGCTCGCCGGCGCACCGTACCTGAGCGCGCTGCCGGTGGCGACCACGCAGTCGATCCGCACC CAGCGCTGCGCGACGCTCGCCGCGGCCGGGCTCGTGTCGGGCGCCGATACGCAAAGCCAGGCCGCCGACGCGCTCGCGCA GCTCCACGCGGCCGGCTACCTCGCCGATTCCGACCTGCTGCAGGCGCCGATGTGGGATTCGCAGGCGATTCCGGCGATCG CGGTGACCTATGCGAACGCGTACACGCGCTCGCGCGTCACCGACAACCTGTGCAATTTCAGCTTTGCGACCACGAACCCG GCGACCGGCGCCGTCGCCGCGCCCGCCACGTCGCCGATGCCGGCCGTGTTCGGCGTCGGCAACGGCGTGCCGCCGACGGC CGGCATCGACCTCGTGTTCAACACGGGCGCGGGTGTCGACCACCGGCTCGCGACGCCCGATGCAAGCTTTGCGGGCGCGC TGTGCCTGCGCCAGCTCTGGACCAACGGGATGCTCGGCATGCCCGCGAACGTCGACGCGGTGCGCGTGAACGCGAACCTG CAGGGCAAGCCGGCGATCATCGTGCAAGGCCGCAGCGATTCGCTCGTGCCCGTGAACCACGCGTCGCGCGCATACGTCGC GCAGAACGGCATCAGCGAAGCCGGGCGTAGCCAGCTCGTGTTCTACGAGGTGACGAACGGCCAGCACTTCGACGCGTTCC TGCCGGTGCCGGGCTTCGACACGCGCTTCGTGCCGGTCCATTACTACAACCTGCAGGCGCTGAACCTGATGTGGAAGCAC CTGAAGAACGGTGCGCCGCTGCCGCCGTCGCAGGTGATCCGCACGGTGCCGCGCGGCGGCACGCCGGGCGCCGCGCCTGC GCTGACGAGCGCGAACCTGCCGCCGATCTCGGCCGCGCCGGGCGCGAACGCGATCACGGTCGGCGCCGGGGCGATCGACG TGCCGCTCTGA
Upstream 100 bases:
>100_bases TTTTCAGGCGGGCCCCGGCGTGCCGGGGCCCGTTTGCGCTTGAGAGGCCGCAAGCCGCATGAAGCGGCGGCGGACCGATA ACGATATCGAGAGGGCGGCG
Downstream 100 bases:
>100_bases CGGCGCCCGCCGCGCTGCCTTCACGAAGCCGGACAGCCGTCCGGCTTTTTCTTTTGGCCGGTCTGGAATCGGTCCCGAAC TGCCTTTTATCGGAATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: 3HB-oligomer hydrolase; 3HBOH [H]
Number of amino acids: Translated: 696; Mature: 695
Protein sequence:
>696_residues MTRLGWGRRMVFGAALAAVAILGACNGDESAERNRLPGFVSGSVRTTAYDGASDDLLTAGLGKTGLGSASAPGFANAARP TSAELRRLAIWSNYRALVDMSANGGYGRFWGPNVDLDGNDTLGEGKIPGTEYLAYSDDGSGSKNVTLLVQVPAGFNPAQP CIVTATSSGSRGVYGAISAAGEWALKRGCAVAYNDKGGGNGAHELMSDTITLIDGTLANAVLAGTSSLFTANVTSGDLAT FNSRFPNRYAFKHAHSQQNPEQDWGHVTLQSVEFAYWALNEQFGPLIDGSRHGVRYRAGDIMTIAASVSNGGGASLAAAE QDTRGWITAVVVGEPQINVRMAPNVVVRSGGQPVPSFGRPLADYATLANLLEPCAAASASLAGAPYLSALPVATTQSIRT QRCATLAAAGLVSGADTQSQAADALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTNP ATGAVAAPATSPMPAVFGVGNGVPPTAGIDLVFNTGAGVDHRLATPDASFAGALCLRQLWTNGMLGMPANVDAVRVNANL QGKPAIIVQGRSDSLVPVNHASRAYVAQNGISEAGRSQLVFYEVTNGQHFDAFLPVPGFDTRFVPVHYYNLQALNLMWKH LKNGAPLPPSQVIRTVPRGGTPGAAPALTSANLPPISAAPGANAITVGAGAIDVPL
Sequences:
>Translated_696_residues MTRLGWGRRMVFGAALAAVAILGACNGDESAERNRLPGFVSGSVRTTAYDGASDDLLTAGLGKTGLGSASAPGFANAARP TSAELRRLAIWSNYRALVDMSANGGYGRFWGPNVDLDGNDTLGEGKIPGTEYLAYSDDGSGSKNVTLLVQVPAGFNPAQP CIVTATSSGSRGVYGAISAAGEWALKRGCAVAYNDKGGGNGAHELMSDTITLIDGTLANAVLAGTSSLFTANVTSGDLAT FNSRFPNRYAFKHAHSQQNPEQDWGHVTLQSVEFAYWALNEQFGPLIDGSRHGVRYRAGDIMTIAASVSNGGGASLAAAE QDTRGWITAVVVGEPQINVRMAPNVVVRSGGQPVPSFGRPLADYATLANLLEPCAAASASLAGAPYLSALPVATTQSIRT QRCATLAAAGLVSGADTQSQAADALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTNP ATGAVAAPATSPMPAVFGVGNGVPPTAGIDLVFNTGAGVDHRLATPDASFAGALCLRQLWTNGMLGMPANVDAVRVNANL QGKPAIIVQGRSDSLVPVNHASRAYVAQNGISEAGRSQLVFYEVTNGQHFDAFLPVPGFDTRFVPVHYYNLQALNLMWKH LKNGAPLPPSQVIRTVPRGGTPGAAPALTSANLPPISAAPGANAITVGAGAIDVPL >Mature_695_residues TRLGWGRRMVFGAALAAVAILGACNGDESAERNRLPGFVSGSVRTTAYDGASDDLLTAGLGKTGLGSASAPGFANAARPT SAELRRLAIWSNYRALVDMSANGGYGRFWGPNVDLDGNDTLGEGKIPGTEYLAYSDDGSGSKNVTLLVQVPAGFNPAQPC IVTATSSGSRGVYGAISAAGEWALKRGCAVAYNDKGGGNGAHELMSDTITLIDGTLANAVLAGTSSLFTANVTSGDLATF NSRFPNRYAFKHAHSQQNPEQDWGHVTLQSVEFAYWALNEQFGPLIDGSRHGVRYRAGDIMTIAASVSNGGGASLAAAEQ DTRGWITAVVVGEPQINVRMAPNVVVRSGGQPVPSFGRPLADYATLANLLEPCAAASASLAGAPYLSALPVATTQSIRTQ RCATLAAAGLVSGADTQSQAADALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTNPA TGAVAAPATSPMPAVFGVGNGVPPTAGIDLVFNTGAGVDHRLATPDASFAGALCLRQLWTNGMLGMPANVDAVRVNANLQ GKPAIIVQGRSDSLVPVNHASRAYVAQNGISEAGRSQLVFYEVTNGQHFDAFLPVPGFDTRFVPVHYYNLQALNLMWKHL KNGAPLPPSQVIRTVPRGGTPGAAPALTSANLPPISAAPGANAITVGAGAIDVPL
Specific function: Participates in the degradation of poly-3- hydroxybutyrate (PHB). It works downstream of poly(3- hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB-oligomers) into 3HB-monomers [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016582 [H]
Pfam domain/function: PF10605 3HBOH [H]
EC number: =3.1.1.22 [H]
Molecular weight: Translated: 71763; Mature: 71632
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLGWGRRMVFGAALAAVAILGACNGDESAERNRLPGFVSGSVRTTAYDGASDDLLTAG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEECCCEEEEEECCCCCCEEEEC LGKTGLGSASAPGFANAARPTSAELRRLAIWSNYRALVDMSANGGYGRFWGPNVDLDGND CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC TLGEGKIPGTEYLAYSDDGSGSKNVTLLVQVPAGFNPAQPCIVTATSSGSRGVYGAISAA CCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEHHHH GEWALKRGCAVAYNDKGGGNGAHELMSDTITLIDGTLANAVLAGTSSLFTANVTSGDLAT HHHHHHCCCEEEECCCCCCCHHHHHHHHHHEEECCHHHHHHHHCCCCEEEEECCCCCCCH FNSRFPNRYAFKHAHSQQNPEQDWGHVTLQSVEFAYWALNEQFGPLIDGSRHGVRYRAGD HHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCC IMTIAASVSNGGGASLAAAEQDTRGWITAVVVGEPQINVRMAPNVVVRSGGQPVPSFGRP EEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCEEEEECCCEEEECCCCCCCHHCCC LADYATLANLLEPCAAASASLAGAPYLSALPVATTQSIRTQRCATLAAAGLVSGADTQSQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH AADALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTNP HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEECCCC ATGAVAAPATSPMPAVFGVGNGVPPTAGIDLVFNTGAGVDHRLATPDASFAGALCLRQLW CCCCEECCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHH TNGMLGMPANVDAVRVNANLQGKPAIIVQGRSDSLVPVNHASRAYVAQNGISEAGRSQLV HCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEECCCCCCHHHHHCCCCCCCCCEEE FYEVTNGQHFDAFLPVPGFDTRFVPVHYYNLQALNLMWKHLKNGAPLPPSQVIRTVPRGG EEEECCCCEEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC TPGAAPALTSANLPPISAAPGANAITVGAGAIDVPL CCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCC >Mature Secondary Structure TRLGWGRRMVFGAALAAVAILGACNGDESAERNRLPGFVSGSVRTTAYDGASDDLLTAG CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEECCCEEEEEECCCCCCEEEEC LGKTGLGSASAPGFANAARPTSAELRRLAIWSNYRALVDMSANGGYGRFWGPNVDLDGND CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC TLGEGKIPGTEYLAYSDDGSGSKNVTLLVQVPAGFNPAQPCIVTATSSGSRGVYGAISAA CCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEHHHH GEWALKRGCAVAYNDKGGGNGAHELMSDTITLIDGTLANAVLAGTSSLFTANVTSGDLAT HHHHHHCCCEEEECCCCCCCHHHHHHHHHHEEECCHHHHHHHHCCCCEEEEECCCCCCCH FNSRFPNRYAFKHAHSQQNPEQDWGHVTLQSVEFAYWALNEQFGPLIDGSRHGVRYRAGD HHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCC IMTIAASVSNGGGASLAAAEQDTRGWITAVVVGEPQINVRMAPNVVVRSGGQPVPSFGRP EEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCEEEEECCCEEEECCCCCCCHHCCC LADYATLANLLEPCAAASASLAGAPYLSALPVATTQSIRTQRCATLAAAGLVSGADTQSQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH AADALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTNP HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEECCCC ATGAVAAPATSPMPAVFGVGNGVPPTAGIDLVFNTGAGVDHRLATPDASFAGALCLRQLW CCCCEECCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHH TNGMLGMPANVDAVRVNANLQGKPAIIVQGRSDSLVPVNHASRAYVAQNGISEAGRSQLV HCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEECCCCCCHHHHHCCCCCCCCCEEE FYEVTNGQHFDAFLPVPGFDTRFVPVHYYNLQALNLMWKHLKNGAPLPPSQVIRTVPRGG EEEECCCCEEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC TPGAAPALTSANLPPISAAPGANAITVGAGAIDVPL CCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA