| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is pcaK [H]
Identifier: 78065386
GI number: 78065386
Start: 824526
End: 825887
Strand: Direct
Name: pcaK [H]
Synonym: Bcep18194_A3912
Alternate gene names: 78065386
Gene position: 824526-825887 (Clockwise)
Preceding gene: 78065385
Following gene: 78065387
Centisome position: 22.32
GC content: 69.97
Gene sequence:
>1362_bases ATGAGCGCGGCGCCGGCCGACGCGCGCGTGCTCGAAGTCGAGAGCGTGATCGACGACACCCATCGCCCGGGTTTTCACTG GATGCTGCTCGTGTTGTGCGGGCTGTGCCTCGTGATCGACGGTTTCGATGCGCAGGCGATGGGCTACGTCGCGCCGAGCG TGATCGCCGAATGGGGCGTGCCGAAGCAGGCGCTCGGGCCCGTGTTCAGCGCGAGCCTGTTCGGGATGCTGCTCGGCGCG CTCGGGCTGTCGGTGCTGGCCGACCGGATCGGGCGGCGCCCGGTGCTGATCGGCTCGACGCTGTTCTTCGCGGTGACGAT GCTCGCGACGCCGTTCGCGGGTTCGATCCCGGTGCTGATGGCGCTGCGCTTCGTCACGGGCCTCGGCCTCGGCTGCATCA TGCCGAACGCGATGGCGCTGGTCGGCGAGTTCAGCCCGGCCACGCATCGCGTGAAGCGGATGATGATCGTGTCGTGCGGC TTCACGCTCGGCGCGGCGCTCGGCGGCTTCATCAGCGCCGCGCTGATTCCGGCGCTCGGCTGGCGGTCGGTGTTCTTCGT CGGCGGCGCGGTGCCGCTCGTGCTGACGATCGCGATGGTTGCGCGGCTGCCCGAATCGCTGCAGTTCCTGGTGCTGAAAG GGCGCGTCGCGCAGGCACGCGACTGGCTCGCGCACTTCGCGCCGCAGGCCGGCATCGATGCGAATACGCGGCTCGTGGTA CGCGAGCGCGCCGCGACCGGCGCGCCGGTCGCCGAGCTGTTCAGCCACGGCCGCCTGCCGGTCACGCTGCTGTTGTGGGC GATCAGCTTCATGAACCTGATCGATCTGTATTTCCTGTCGAACTGGCTGCCGACCGTGATGCGCGACGCCGGCTATTCGC AGGGCACGGCGGTGATCGTCGGCACGGTGCTGCAGACGGGCGGCGTGATCGGCACGCTGTCGCTCGGCTGGTTCATCGAA CGCTACGGCTTCGTGCGCGTGCTGTTCGCATGCTTCGCGTGCGCGGCCGTGTCGGTGGGGCTGATCGGCTCGGTCGCGCA TGCGCTGCCGTGGCTGCTGGTGGTGGTGTTCGCGGGCGGGTTCTGCGTGGTCGGCGGGCAGCCGGCCGTGAACGCGCTCG CGGGCCAGTATTACCCGACGTCGCTGCGCTCGACGGGCATCGGCTGGAGCCTCGGCATCGGCCGGATCGGCTCGGTGCTC GGGCCGCTCGTCGGCGGACAACTGATTGCGCTCAACTGGTCGAACGGTGCGCTGTTCCACGCGGCCGCGGTGCCCGTGCT GTGCTCGGCGCTGTTCGTCCTCGGGCTTGCCGGTGTGACGCGGCGCAATGGCGCGCAGGCGCCGAACGCCGCGATGAATT GA
Upstream 100 bases:
>100_bases TCGCGAACCAGATCGGCGACGCCGGCGTGCTGCGCGAAGCGATGGCGCTCGCGCGCCAGGGCGTGACACCGCCCGTGCAT CCGGCCGCCGAGGTGACGCA
Downstream 100 bases:
>100_bases GGGAGAAAGGAAACGATGACGCTTGACCTGTCGAAACCGGCGAACGCCGGCTACCAGAGCGGTTTCGCGAACGAATTCGC GACCGAGGCACTGCCCGGCG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSAAPADARVLEVESVIDDTHRPGFHWMLLVLCGLCLVIDGFDAQAMGYVAPSVIAEWGVPKQALGPVFSASLFGMLLGA LGLSVLADRIGRRPVLIGSTLFFAVTMLATPFAGSIPVLMALRFVTGLGLGCIMPNAMALVGEFSPATHRVKRMMIVSCG FTLGAALGGFISAALIPALGWRSVFFVGGAVPLVLTIAMVARLPESLQFLVLKGRVAQARDWLAHFAPQAGIDANTRLVV RERAATGAPVAELFSHGRLPVTLLLWAISFMNLIDLYFLSNWLPTVMRDAGYSQGTAVIVGTVLQTGGVIGTLSLGWFIE RYGFVRVLFACFACAAVSVGLIGSVAHALPWLLVVVFAGGFCVVGGQPAVNALAGQYYPTSLRSTGIGWSLGIGRIGSVL GPLVGGQLIALNWSNGALFHAAAVPVLCSALFVLGLAGVTRRNGAQAPNAAMN
Sequences:
>Translated_453_residues MSAAPADARVLEVESVIDDTHRPGFHWMLLVLCGLCLVIDGFDAQAMGYVAPSVIAEWGVPKQALGPVFSASLFGMLLGA LGLSVLADRIGRRPVLIGSTLFFAVTMLATPFAGSIPVLMALRFVTGLGLGCIMPNAMALVGEFSPATHRVKRMMIVSCG FTLGAALGGFISAALIPALGWRSVFFVGGAVPLVLTIAMVARLPESLQFLVLKGRVAQARDWLAHFAPQAGIDANTRLVV RERAATGAPVAELFSHGRLPVTLLLWAISFMNLIDLYFLSNWLPTVMRDAGYSQGTAVIVGTVLQTGGVIGTLSLGWFIE RYGFVRVLFACFACAAVSVGLIGSVAHALPWLLVVVFAGGFCVVGGQPAVNALAGQYYPTSLRSTGIGWSLGIGRIGSVL GPLVGGQLIALNWSNGALFHAAAVPVLCSALFVLGLAGVTRRNGAQAPNAAMN >Mature_452_residues SAAPADARVLEVESVIDDTHRPGFHWMLLVLCGLCLVIDGFDAQAMGYVAPSVIAEWGVPKQALGPVFSASLFGMLLGAL GLSVLADRIGRRPVLIGSTLFFAVTMLATPFAGSIPVLMALRFVTGLGLGCIMPNAMALVGEFSPATHRVKRMMIVSCGF TLGAALGGFISAALIPALGWRSVFFVGGAVPLVLTIAMVARLPESLQFLVLKGRVAQARDWLAHFAPQAGIDANTRLVVR ERAATGAPVAELFSHGRLPVTLLLWAISFMNLIDLYFLSNWLPTVMRDAGYSQGTAVIVGTVLQTGGVIGTLSLGWFIER YGFVRVLFACFACAAVSVGLIGSVAHALPWLLVVVFAGGFCVVGGQPAVNALAGQYYPTSLRSTGIGWSLGIGRIGSVLG PLVGGQLIALNWSNGALFHAAAVPVLCSALFVLGLAGVTRRNGAQAPNAAMN
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=427, Percent_Identity=26.2295081967213, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI8923870, Length=370, Percent_Identity=27.5675675675676, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI166064021, Length=351, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI213021148, Length=461, Percent_Identity=23.4273318872017, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI7662270, Length=220, Percent_Identity=24.0909090909091, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI87081723, Length=418, Percent_Identity=33.2535885167464, Blast_Score=168, Evalue=6e-43, Organism=Escherichia coli, GI1786229, Length=387, Percent_Identity=21.9638242894057, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI87082231, Length=429, Percent_Identity=22.1445221445221, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788068, Length=455, Percent_Identity=23.956043956044, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI87082404, Length=385, Percent_Identity=21.2987012987013, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87082159, Length=388, Percent_Identity=24.2268041237113, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788074, Length=247, Percent_Identity=25.5060728744939, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32564663, Length=422, Percent_Identity=23.2227488151659, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17565978, Length=277, Percent_Identity=25.9927797833935, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71980582, Length=343, Percent_Identity=23.0320699708455, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI19922874, Length=435, Percent_Identity=22.9885057471264, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI161077756, Length=461, Percent_Identity=23.2104121475054, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24640198, Length=227, Percent_Identity=25.9911894273128, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640196, Length=227, Percent_Identity=25.9911894273128, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640200, Length=227, Percent_Identity=25.9911894273128, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI19922616, Length=368, Percent_Identity=24.1847826086957, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47317; Mature: 47185
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAPADARVLEVESVIDDTHRPGFHWMLLVLCGLCLVIDGFDAQAMGYVAPSVIAEWGV CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC PKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGSTLFFAVTMLATPFAGSIPVLM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHH ALRFVTGLGLGCIMPNAMALVGEFSPATHRVKRMMIVSCGFTLGAALGGFISAALIPALG HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC WRSVFFVGGAVPLVLTIAMVARLPESLQFLVLKGRVAQARDWLAHFAPQAGIDANTRLVV HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEE RERAATGAPVAELFSHGRLPVTLLLWAISFMNLIDLYFLSNWLPTVMRDAGYSQGTAVIV EECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE GTVLQTGGVIGTLSLGWFIERYGFVRVLFACFACAAVSVGLIGSVAHALPWLLVVVFAGG HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCVVGGQPAVNALAGQYYPTSLRSTGIGWSLGIGRIGSVLGPLVGGQLIALNWSNGALFH EEEECCCHHHHHHHCCCCCCHHHCCCCCHHCCHHHHHHHHHHHHCCEEEEEECCCCCCHH AAAVPVLCSALFVLGLAGVTRRNGAQAPNAAMN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SAAPADARVLEVESVIDDTHRPGFHWMLLVLCGLCLVIDGFDAQAMGYVAPSVIAEWGV CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC PKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGSTLFFAVTMLATPFAGSIPVLM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHH ALRFVTGLGLGCIMPNAMALVGEFSPATHRVKRMMIVSCGFTLGAALGGFISAALIPALG HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC WRSVFFVGGAVPLVLTIAMVARLPESLQFLVLKGRVAQARDWLAHFAPQAGIDANTRLVV HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEE RERAATGAPVAELFSHGRLPVTLLLWAISFMNLIDLYFLSNWLPTVMRDAGYSQGTAVIV EECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE GTVLQTGGVIGTLSLGWFIERYGFVRVLFACFACAAVSVGLIGSVAHALPWLLVVVFAGG HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCVVGGQPAVNALAGQYYPTSLRSTGIGWSLGIGRIGSVLGPLVGGQLIALNWSNGALFH EEEECCCHHHHHHHCCCCCCHHHCCCCCHHCCHHHHHHHHHHHHCCEEEEEECCCCCCHH AAAVPVLCSALFVLGLAGVTRRNGAQAPNAAMN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]