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The map label for this gene is rfbU [H]

Identifier: 78065334

GI number: 78065334

Start: 769788

End: 771116

Strand: Direct

Name: rfbU [H]

Synonym: Bcep18194_A3860

Alternate gene names: 78065334

Gene position: 769788-771116 (Clockwise)

Preceding gene: 78065333

Following gene: 78065335

Centisome position: 20.84

GC content: 47.48

Gene sequence:

>1329_bases
GTGTATGGCAATAGCAAGGTGAGCATGAAACGCGTCATCGCAATTGACGGTCATAACCTAGCACTCCAGCATGGAACAGG
TGTTGCGACCTATGCCAAGAGTCTTGCTGACAATGTCGAGCAAATGGGGTGGGATGCGTGGACCTTATACGGCGCTCCTA
TCTCAGCCCGTCAGACGCCCATACTTCGGGAAATCTCTTTCTTTGATTACTTGGGCGGCACGAATCAAAAACGCGGCCTG
TTAAAAAGTGCTTATCTCGAGGCGAAAGAGTATCCGCGAGCACCATTCGGGTACAACGTGGTGGAAATTCCGCAATCCGG
TGTGGTGGAGGTGCGTCGCTTCGGTAGTCGACTCCCAAAGCATTCTCGAATTTTCAATGTAAATGACCTATTTCTGGTTG
CGCGACGATATTTCAAGCGGCATAAGAAATTTCTAAAGGTCAGGTTCGAGGAGAAGCCGGATGTTATGCATTGGACTTAT
CCGCTGCCGATAAAAGCGGAAGGGGTGCCGAATATTTACACTATTCATGATTTGGTTCCCCTGCGTTTGCCGTATACCAC
GCTCGATAACAAGCGATACTATCATCGTCTGATTAAGGGTTGCTTGGATTCCAGCGATAAAATTTGCACGGTTTCAGAAA
AATCCAAGGAAGATATTCTGAATCTATTTAATGTGTCGTCAGATCATGTGGAAAATACATATCAATCTGTCGACACTGCA
CATGTATTGGAAAATAAAAGCCAGGCGGACGCTGAGCAGGAGGTGGCGGGAATATATGGTTTGGAGCCATATAGCTACTT
CTTGTTTTTTGGCGCAATCGAACCTAAGAAAAACGTTGGGAGATTGGTTGAGGCCTTTCTCTCGTCGCATGTCGACGCGA
AATTGGTTATCGTCGGATCGTTAGCGTGGAAGTCGAATGAAGAAGTGCGGCTTTTGGAAAGCATGAAGAAGAACGATTCT
GGAATTCGATCCAATATCAAGATGTTTGATTATGCGCCACGCCCGTTCTTGATGAGCCTAATTCGATGCGCAAAGGCGGT
CGTCTTTCCGTCTCTTTACGAAGGATTTGGTCTGCCGCTGCTGGAGGCGATGCAACTCGGAATTCCGACGTTGTGCTCGA
CGGAAGGGTCGTTGCCCGAGATAGCTGGAAATGCGAGCGTGTTGGTTGACCCATACGATACTAGTGCTATTGCTCGCGGT
CTGAATTTAATAGACAAGGATGATCGATTGAGGGGTGAGTTGTCGCGCATAGGGTTTGAGCGAGCAAAGGAATTTTCTGC
AGAAAGTTATCGGGGAAGGTTGACATCTTTATATGATGCCGTGCTTTAA

Upstream 100 bases:

>100_bases
GGAGATCCAGAAGGTATTGAACTTGGTGTTCTCGGTGGCCTATCCAGTTGTCACTGGTGTGCAAACATTTAAGTAATACG
TTCGATCCTGATAAGATCGT

Downstream 100 bases:

>100_bases
GGTCGGCGGCGAATTGTAAGTGGTGTAAAAAATCGAGAGCGCAGTGAGGTCAGTTATGTGGAAAGTAATGAAGAAGAAAA
ATGAGAGTCGCCCAACGACT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MYGNSKVSMKRVIAIDGHNLALQHGTGVATYAKSLADNVEQMGWDAWTLYGAPISARQTPILREISFFDYLGGTNQKRGL
LKSAYLEAKEYPRAPFGYNVVEIPQSGVVEVRRFGSRLPKHSRIFNVNDLFLVARRYFKRHKKFLKVRFEEKPDVMHWTY
PLPIKAEGVPNIYTIHDLVPLRLPYTTLDNKRYYHRLIKGCLDSSDKICTVSEKSKEDILNLFNVSSDHVENTYQSVDTA
HVLENKSQADAEQEVAGIYGLEPYSYFLFFGAIEPKKNVGRLVEAFLSSHVDAKLVIVGSLAWKSNEEVRLLESMKKNDS
GIRSNIKMFDYAPRPFLMSLIRCAKAVVFPSLYEGFGLPLLEAMQLGIPTLCSTEGSLPEIAGNASVLVDPYDTSAIARG
LNLIDKDDRLRGELSRIGFERAKEFSAESYRGRLTSLYDAVL

Sequences:

>Translated_442_residues
MYGNSKVSMKRVIAIDGHNLALQHGTGVATYAKSLADNVEQMGWDAWTLYGAPISARQTPILREISFFDYLGGTNQKRGL
LKSAYLEAKEYPRAPFGYNVVEIPQSGVVEVRRFGSRLPKHSRIFNVNDLFLVARRYFKRHKKFLKVRFEEKPDVMHWTY
PLPIKAEGVPNIYTIHDLVPLRLPYTTLDNKRYYHRLIKGCLDSSDKICTVSEKSKEDILNLFNVSSDHVENTYQSVDTA
HVLENKSQADAEQEVAGIYGLEPYSYFLFFGAIEPKKNVGRLVEAFLSSHVDAKLVIVGSLAWKSNEEVRLLESMKKNDS
GIRSNIKMFDYAPRPFLMSLIRCAKAVVFPSLYEGFGLPLLEAMQLGIPTLCSTEGSLPEIAGNASVLVDPYDTSAIARG
LNLIDKDDRLRGELSRIGFERAKEFSAESYRGRLTSLYDAVL
>Mature_442_residues
MYGNSKVSMKRVIAIDGHNLALQHGTGVATYAKSLADNVEQMGWDAWTLYGAPISARQTPILREISFFDYLGGTNQKRGL
LKSAYLEAKEYPRAPFGYNVVEIPQSGVVEVRRFGSRLPKHSRIFNVNDLFLVARRYFKRHKKFLKVRFEEKPDVMHWTY
PLPIKAEGVPNIYTIHDLVPLRLPYTTLDNKRYYHRLIKGCLDSSDKICTVSEKSKEDILNLFNVSSDHVENTYQSVDTA
HVLENKSQADAEQEVAGIYGLEPYSYFLFFGAIEPKKNVGRLVEAFLSSHVDAKLVIVGSLAWKSNEEVRLLESMKKNDS
GIRSNIKMFDYAPRPFLMSLIRCAKAVVFPSLYEGFGLPLLEAMQLGIPTLCSTEGSLPEIAGNASVLVDPYDTSAIARG
LNLIDKDDRLRGELSRIGFERAKEFSAESYRGRLTSLYDAVL

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 49887; Mature: 49887

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGNSKVSMKRVIAIDGHNLALQHGTGVATYAKSLADNVEQMGWDAWTLYGAPISARQTP
CCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
ILREISFFDYLGGTNQKRGLLKSAYLEAKEYPRAPFGYNVVEIPQSGVVEVRRFGSRLPK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCC
HSRIFNVNDLFLVARRYFKRHKKFLKVRFEEKPDVMHWTYPLPIKAEGVPNIYTIHDLVP
CCEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCEECCCCCCEEECCCCEE
LRLPYTTLDNKRYYHRLIKGCLDSSDKICTVSEKSKEDILNLFNVSSDHVENTYQSVDTA
CCCCCEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH
HVLENKSQADAEQEVAGIYGLEPYSYFLFFGAIEPKKNVGRLVEAFLSSHVDAKLVIVGS
HHHCCCHHCCHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEE
LAWKSNEEVRLLESMKKNDSGIRSNIKMFDYAPRPFLMSLIRCAKAVVFPSLYEGFGLPL
ECCCCCCHHHHHHHHHCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
LEAMQLGIPTLCSTEGSLPEIAGNASVLVDPYDTSAIARGLNLIDKDDRLRGELSRIGFE
HHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
RAKEFSAESYRGRLTSLYDAVL
HHHHHCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYGNSKVSMKRVIAIDGHNLALQHGTGVATYAKSLADNVEQMGWDAWTLYGAPISARQTP
CCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
ILREISFFDYLGGTNQKRGLLKSAYLEAKEYPRAPFGYNVVEIPQSGVVEVRRFGSRLPK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCC
HSRIFNVNDLFLVARRYFKRHKKFLKVRFEEKPDVMHWTYPLPIKAEGVPNIYTIHDLVP
CCEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCEECCCCCCEEECCCCEE
LRLPYTTLDNKRYYHRLIKGCLDSSDKICTVSEKSKEDILNLFNVSSDHVENTYQSVDTA
CCCCCEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH
HVLENKSQADAEQEVAGIYGLEPYSYFLFFGAIEPKKNVGRLVEAFLSSHVDAKLVIVGS
HHHCCCHHCCHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEE
LAWKSNEEVRLLESMKKNDSGIRSNIKMFDYAPRPFLMSLIRCAKAVVFPSLYEGFGLPL
ECCCCCCHHHHHHHHHCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
LEAMQLGIPTLCSTEGSLPEIAGNASVLVDPYDTSAIARGLNLIDKDDRLRGELSRIGFE
HHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
RAKEFSAESYRGRLTSLYDAVL
HHHHHCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]