| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is gntK [H]
Identifier: 78065225
GI number: 78065225
Start: 640835
End: 641338
Strand: Direct
Name: gntK [H]
Synonym: Bcep18194_A3749
Alternate gene names: 78065225
Gene position: 640835-641338 (Clockwise)
Preceding gene: 78065224
Following gene: 78065227
Centisome position: 17.35
GC content: 63.29
Gene sequence:
>504_bases ATGATTCTGATCGCAATGGGCGTGTCGGGTGCGGGCAAGTCGCTAATCGGCGAAATGCTGGCGGAACGCCTGTCGTGCAG CTATACCGATGGCGACGCGTTTCACAGCGCGGCGAACAAGGAAAAGATGCACAACGGCATTCCGCTGACCGACGACGACC GCTGGCCGTGGCTGCGCACGATCCGCGCGGCCATCGAGGAGAAGCAGCGTGCCGGCGAGACGGCCGTGTTCACGTGCTCG TCGCTGAAGCGCTCGTACCGCGACGTGCTGCGCGGCACCGACACCGACGTGCGGTTCGTGTATCTGAAGGGTACGTTCGA GATGTTGCACGAGCGCCTGAAGAGCCGCACCGGCCATTTCTTCGATCCGTCGCTGCTGAAGAGCCAGCTCGACACGCTCG AGGAGCCGGGCCCGGACGAAGCGATCGAGGTCAGCATCGAGCTGACGCCCGAACAGATCGTCGATCAGGTCATGCTGAAG ATCGGCATCGCGCAGCAGCACTGA
Upstream 100 bases:
>100_bases CAGACGTTCAAGACCTGGTCGTTGCTCGAAACCATCATCTCGGTGCTTGGTCTTGGCTTCACGCTGCTGCTGAGCATGGT TCTGTAACAAGGGGTAGGCA
Downstream 100 bases:
>100_bases GCGCGGTTCGCGGCAATCGTCATGAAAAAGGCGCCCCTCGGGGCGCCTTTTTTCGTTTGTGGCTCCGCAGGCCGGTCAGG CCGCGTGGGCCTGCTGCGCG
Product: gluconate kinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHNGIPLTDDDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDVLRGTDTDVRFVYLKGTFEMLHERLKSRTGHFFDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLK IGIAQQH
Sequences:
>Translated_167_residues MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHNGIPLTDDDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDVLRGTDTDVRFVYLKGTFEMLHERLKSRTGHFFDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLK IGIAQQH >Mature_167_residues MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHNGIPLTDDDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDVLRGTDTDVRFVYLKGTFEMLHERLKSRTGHFFDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLK IGIAQQH
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=175, Percent_Identity=36.5714285714286, Blast_Score=127, Evalue=5e-30, Organism=Escherichia coli, GI87082265, Length=139, Percent_Identity=46.0431654676259, Blast_Score=143, Evalue=5e-36, Organism=Escherichia coli, GI1790719, Length=147, Percent_Identity=45.578231292517, Blast_Score=137, Evalue=5e-34, Organism=Caenorhabditis elegans, GI25146487, Length=166, Percent_Identity=43.3734939759036, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320454, Length=156, Percent_Identity=36.5384615384615, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18739; Mature: 18739
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHNGIPLTDDDRWPWLRT CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQRAGETAVFTCSSLKRSYRDVLRGTDTDVRFVYLKGTFEMLHERLKSRTGHF HHHHHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCC FDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLKIGIAQQH CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHNGIPLTDDDRWPWLRT CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQRAGETAVFTCSSLKRSYRDVLRGTDTDVRFVYLKGTFEMLHERLKSRTGHF HHHHHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCC FDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLKIGIAQQH CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]