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The map label for this gene is nuoJ [H]

Identifier: 78048400

GI number: 78048400

Start: 3237332

End: 3237991

Strand: Reverse

Name: nuoJ [H]

Synonym: XCV2844

Alternate gene names: 78048400

Gene position: 3237991-3237332 (Counterclockwise)

Preceding gene: 78048401

Following gene: 78048399

Centisome position: 62.53

GC content: 61.97

Gene sequence:

>660_bases
ATGGACTGGGTCACTCTTGCTTTCTACGCCTTCTCCGCCGTCGCGGTCGTGTCCGCCGGTGCGGTGATCAGCGTGCGCAA
CCCGGTATACGCCGTGTTGTGCCTGATCCTCACGTTCTTCTCGATGGCATGCATCTGGCTGTTGGTCGGGGCTGAATTCC
TCGGCGTGACGCTGGTGCTGGTCTATGTCGGCGCGGTGATGGTGCTGTTCCTCTTCGTGGTGATGATGCTGGACATCGAT
ACCAGCCGCCTGCGCGAGGGATGGGTCAAGTACATGCCGCTCGGCGTCATCGTGGCGGTGGCCATGCTCGCGCAGATGGT
CACGTTGATCGGTGTCAAGGCGCGCAGCGCCACGCCGTTCCCGGCAGACAACGCAGCTGCGCAAGCGGCTGACAGTTCCA
ACCTGACCTGGTTAGCCAAGAGCCTGTACACCGAATTTCTGCTGCCTTTCGAATTTGCCGCGGTGATCCTGACGGTGGCG
GTGGTGGCTGCAGTGATGCTGACCCTGCGCAAGCGCACTGGCATCAAGTTGCAGAATGCCGGCGAGCAGTCCCGGGTCAA
GGCGGGCGACCGTCTGCGCATGGTCAAAATGGCGGTTGAAAAGCCGGTACAGGTTGCGCCGCAAATCGACGCGGCCGACG
GACAGGAGGCGAAGTCTTGA

Upstream 100 bases:

>100_bases
AACATTGTCAACAAGCCGCAGCTGCTGGCGATCGGAGACCGGTTAGAGACCGAGATCGCCGAGCGTCGCGCTGCCGATGC
CGCCTTCCGTTGAGGTCATG

Downstream 100 bases:

>100_bases
TTACCTTGGGCCACCTGCTTGGACTGGGCGCGGTGCTGTTCTGCATCTCGCTGGCCGGCATCTTCCTCAACCGCAAGAAC
GTCATCGTGCTGCTGATGTC

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVLVYVGAVMVLFLFVVMMLDID
TSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPFPADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVA
VVAAVMLTLRKRTGIKLQNAGEQSRVKAGDRLRMVKMAVEKPVQVAPQIDAADGQEAKS

Sequences:

>Translated_219_residues
MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVLVYVGAVMVLFLFVVMMLDID
TSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPFPADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVA
VVAAVMLTLRKRTGIKLQNAGEQSRVKAGDRLRMVKMAVEKPVQVAPQIDAADGQEAKS
>Mature_219_residues
MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVLVYVGAVMVLFLFVVMMLDID
TSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPFPADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVA
VVAAVMLTLRKRTGIKLQNAGEQSRVKAGDRLRMVKMAVEKPVQVAPQIDAADGQEAKS

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=183, Percent_Identity=27.8688524590164, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 23611; Mature: 23611

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL
CCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
GEQSRVKAGDRLRMVKMAVEKPVQVAPQIDAADGQEAKS
CCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL
CCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
GEQSRVKAGDRLRMVKMAVEKPVQVAPQIDAADGQEAKS
CCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]