Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is gumF
Identifier: 78048339
GI number: 78048339
Start: 3161838
End: 3162956
Strand: Reverse
Name: gumF
Synonym: XCV2783
Alternate gene names: NA
Gene position: 3162956-3161838 (Counterclockwise)
Preceding gene: 78048340
Following gene: 78048338
Centisome position: 61.08
GC content: 62.29
Gene sequence:
>1119_bases ATGAGCGTGTCGGCAATGCCGGCATCGCGGTCGGCTTTGCCGGCCGCCGACGCGCAGGTTGCAACAGGCGGTCGCGTCCG CGACCCGCGCATCGACGCCACCAAGGCCATTGCGATCCTGTTGGTGGTGTTCTGTCATGCCAAGGGCGTCCCACATGGCA TGACCTTGTTCGCCTATAGCTTCCATGTGCCGCTGTTTTTCCTGGTATCCGGCTGGTTGGCAGCGGGTTATGCGTCGACC ACGACTGGGCTGGACAGGCGCTCAGTCGGCAGGCATGTACGCAGCTTGCTGCTGCCGTACGTCACGTTCTATCTGCTTGG CTATGCCTATTGGCTGTTGACCCGCAATATCGGAGAAAAGGCTGCGCGCTGGGGAAGTCACCCGTGGTGGGAACCGATCG TGGCGATGTTCACCGGTATCGGCCCGGACCTGTATGTGCAGCCTCCGCTGTGGTTCTTGCCCGTCATGTTGGTGACCGTT GTGAGTTACATGGTCTTGCGCCGCCTGCTGGCGCCGATCCTGATCGCGGGGCTGGCATTGATCGTGGCGTGGTTCTGGAT GAACTGGTTTCCGACACAGCACGTGCGGATTTTTTTCGGTTTGGATGTGCTACCGGTGTCGCTGTGCTTTTACGCATTGG GCGCCTTGCTGATCCACGTTTCGGCACGCCTGCCGACATCCTTGGCCGGCAGCGCCCTGGCGACGGTCGTGTTGGGATTG GCGGTGGCCTGGCTGGCTGTCGCCAATGGGCGAATCGACGTCAACATGCTCGAATTCGGAAGTAACCACGCGCTGTTCCT GGTTAGCGCGTTGCTTGGTTCGTTGATGGTGATCTGCGCGGCGCGGCTGGTACAGAGCTGGGCGTGGCTGCAGTGGATCG GCCGCAATACCTTGCTGATTCTTTGTACGCATATGTTGGTGTTCTTCGTGCTCTCCGGTGTTGCTGCCTTGGCTGGTGGA TTCGGTGGGGCGCGTCCGGGGCTGGGTTGGGCGGTCTTTGTCACGCTGTTCGCATTGGCCGCCAGCGTGCCGCTGCGTTG GATCCTGATGCGCTTCGCTCCGTGGGCGCTGGGCGCTGGGCGCGCGCCGGGTGGCGGCATGAGCGGCGCCTTGGCATGA
Upstream 100 bases:
>100_bases TGCTGCCGACCTGGTCTGCGTCCGGCGCGCAAACCGCCTTGATCAAGGACGATCCAACGGCAGATGGCGCGCAGTTGCCA TTGCCTGCGGGAGCAGCACG
Downstream 100 bases:
>100_bases CAAGCACATCCTCTTCACCGCACGCTGCGCGTGCGCATCACTTGGCGGACGCCAGAACGGCACGTGCGCCGACGCGTGAC TGGCAGATCGACGCCGCCAA
Product: xanthan biosynthesis acetyltransferase GumF
Products: NA
Alternate protein names: GumG Protein; O-Actetyl Transferase Related Protein; Acetyltransferase; Xanthan Biosynthesis Acetyltransferase GumF; Xanthan Biosynthesis Acetyltransferase GumG
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSVSAMPASRSALPAADAQVATGGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYSFHVPLFFLVSGWLAAGYAST TTGLDRRSVGRHVRSLLLPYVTFYLLGYAYWLLTRNIGEKAARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLVTV VSYMVLRRLLAPILIAGLALIVAWFWMNWFPTQHVRIFFGLDVLPVSLCFYALGALLIHVSARLPTSLAGSALATVVLGL AVAWLAVANGRIDVNMLEFGSNHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLILCTHMLVFFVLSGVAALAGG FGGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGAGRAPGGGMSGALA
Sequences:
>Translated_372_residues MSVSAMPASRSALPAADAQVATGGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYSFHVPLFFLVSGWLAAGYAST TTGLDRRSVGRHVRSLLLPYVTFYLLGYAYWLLTRNIGEKAARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLVTV VSYMVLRRLLAPILIAGLALIVAWFWMNWFPTQHVRIFFGLDVLPVSLCFYALGALLIHVSARLPTSLAGSALATVVLGL AVAWLAVANGRIDVNMLEFGSNHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLILCTHMLVFFVLSGVAALAGG FGGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGAGRAPGGGMSGALA >Mature_371_residues SVSAMPASRSALPAADAQVATGGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYSFHVPLFFLVSGWLAAGYASTT TGLDRRSVGRHVRSLLLPYVTFYLLGYAYWLLTRNIGEKAARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLVTVV SYMVLRRLLAPILIAGLALIVAWFWMNWFPTQHVRIFFGLDVLPVSLCFYALGALLIHVSARLPTSLAGSALATVVLGLA VAWLAVANGRIDVNMLEFGSNHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLILCTHMLVFFVLSGVAALAGGF GGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGAGRAPGGGMSGALA
Specific function: Unknown
COG id: COG3594
COG function: function code G; Fucose 4-O-acetylase and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40171; Mature: 40040
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSAMPASRSALPAADAQVATGGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHVPLFFLVSGWLAAGYASTTTGLDRRSVGRHVRSLLLPYVTFYLLGYAYWLLTRNIGEK HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLVTVVSYMVLRRLLAPILIAGLAL HHHCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAWFWMNWFPTQHVRIFFGLDVLPVSLCFYALGALLIHVSARLPTSLAGSALATVVLGL HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVAWLAVANGRIDVNMLEFGSNHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLI HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LCTHMLVFFVLSGVAALAGGFGGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGAG HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAPGGGMSGALA CCCCCCCCCCCC >Mature Secondary Structure SVSAMPASRSALPAADAQVATGGRVRDPRIDATKAIAILLVVFCHAKGVPHGMTLFAYS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHVPLFFLVSGWLAAGYASTTTGLDRRSVGRHVRSLLLPYVTFYLLGYAYWLLTRNIGEK HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARWGSHPWWEPIVAMFTGIGPDLYVQPPLWFLPVMLVTVVSYMVLRRLLAPILIAGLAL HHHCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAWFWMNWFPTQHVRIFFGLDVLPVSLCFYALGALLIHVSARLPTSLAGSALATVVLGL HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVAWLAVANGRIDVNMLEFGSNHALFLVSALLGSLMVICAARLVQSWAWLQWIGRNTLLI HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LCTHMLVFFVLSGVAALAGGFGGARPGLGWAVFVTLFALAASVPLRWILMRFAPWALGAG HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAPGGGMSGALA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA