Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is gumK
Identifier: 78048334
GI number: 78048334
Start: 3155732
End: 3156928
Strand: Reverse
Name: gumK
Synonym: XCV2778
Alternate gene names: NA
Gene position: 3156928-3155732 (Counterclockwise)
Preceding gene: 78048335
Following gene: 78048333
Centisome position: 60.96
GC content: 61.24
Gene sequence:
>1197_bases ATGAGCGACACACCCGCCGCCGCTTCCGGCATCCGCCGGCCTTGCTATCTGGTCTTGTCCGCCCACGATTACCGCACGCC GCGGCGCGCCAATATCCACTTCATCACCGATCAACTGGCGTTGCGCGGGACCACGCGGTTCTTCTCGCTGCGTTACAGCC GGTTGTCGCGCATGAAGGGCGATATGCGGCTGCCGCTCGACGAAACCGCGAACAAGGTCGTCTCGCACAAGGGCGTCGAC TGCTACCTGTGGCGCACGACGGTGCATCCGTTCAATACGCGTCGTCCATGGTTGCGGTCGGTCGAGGATGCGATGTTCCG TTGGTATGCTGCGCATCCGCCGCGCCAGTTGCTCGACTGGATGCGCGAGGCGGATGTGATCGTGTTCGAAAGCGGCATTG CGGTCGCTTTCATCGAGCTGGCCAAGCGCGTCAATCCTGCAGCCAAGCTGGTCTATCGCGCGTCGGACGGATTGAGCACG ATCAATGTTGCGTCGTATATCGAACGCGAGTTCGACCGCGTGGCGCCCAAGCTCGATGTGATTGCACTGGTATCGCCGGC AATGGCAGAGGAGATCGCCAGCCGCGACAATGTCTATCACGTTGGCCATGGCGTGGATCACAACCTGGATCAACTCGGCG ACCCGTCGCCGTACGGTGAGGGCATTCACGCAGTTGCGGTCGGTTCGATGTTGTTCGATCCGGAATTCTTCGTCGTTGCC AGCAAGGCGTTCCCGCAGGTGACGTTTCATGTGATCGGTTCGGGCATGGGCCGGCATCCGGGCTACGGCGATAACGTGGT GGTCTATGGCGAGATGAAACACGCCGAGACCATTGGCTATATCAAGCACGCGCGGTTCGGGATTGCGCCGTATGCCTCCG AGCAAGTGCCGGTCTACCTGGCCGACAGTTCGATGAAGTTGCTGCAATACGACTTTTTCGGCTTGCCTGCGGTGTGTCCG AACGCCGTGGTGGGGCCGTATCAGTCGCGGTTCGGCTACACTCCGGGGAACGCCGATTCTGTCGTTGCAGCAATCGGCCG CGCCCTGGAAGCACCGCGCGTGCGTTATCGCCAGTGCCTGAATTGGTCCGACACCACCGATCGCGTGCTGGATCCCAGTG CGTATCCGGAAACCCGTTTGTATCCACAGCAAAGCGCAGCGGTGCATGCCTCGTCGGAGGCTGCGCTCTCGCATTAA
Upstream 100 bases:
>100_bases CCGCAAGCTGCTGACGCAGGCCAAGGCACGTCGATGAGTCGACATTGTCTTCGCCTGCAGTCGGTCATGCTTTCTCTCAC TCATTCATAGGACACGGCCC
Downstream 100 bases:
>100_bases TGCGCGCACATTTTTTTCTTTAGGAGACTCACACGTTATGGCCAACGCCTTGCTGCAGAAGTGGATAGAACATGCAGAAC GTCGTGCGCTGTTCTGGTGG
Product: xanthan biosynthesis glucuronosyltransferase GumK
Products: NA
Alternate protein names: UDP-GlcA Beta-Glucuronosyltransferase; GumK-Related Protein; Glucuronyl Transferase; Glucuronosyltransferase; Xanthan Biosynthesis Glucuronosyltransferase GumK
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDETANKVVSHKGVD CYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDWMREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLST INVASYIEREFDRVAPKLDVIALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCP NAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCLNWSDTTDRVLDPSAYPETRLYPQQSAAVHASSEAALSH
Sequences:
>Translated_398_residues MSDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDETANKVVSHKGVD CYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDWMREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLST INVASYIEREFDRVAPKLDVIALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCP NAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCLNWSDTTDRVLDPSAYPETRLYPQQSAAVHASSEAALSH >Mature_397_residues SDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDETANKVVSHKGVDC YLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDWMREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTI NVASYIEREFDRVAPKLDVIALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVAS KAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPN AVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCLNWSDTTDRVLDPSAYPETRLYPQQSAAVHASSEAALSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44323; Mature: 44192
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKG CCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCC DMRLPLDETANKVVSHKGVDCYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDW CCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH MREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPKLDV HHHCCEEEEECCHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE IALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA HHHHCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCEEHEEEHHHHCCCCEEEEE SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEE ADSSMKLLQYDFFGLPAVCPNAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCL ECCCCEEHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC NWSDTTDRVLDPSAYPETRLYPQQSAAVHASSEAALSH CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC >Mature Secondary Structure SDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKG CCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCC DMRLPLDETANKVVSHKGVDCYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDW CCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH MREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPKLDV HHHCCEEEEECCHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE IALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA HHHHCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCEEHEEEHHHHCCCCEEEEE SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEE ADSSMKLLQYDFFGLPAVCPNAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCL ECCCCEEHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC NWSDTTDRVLDPSAYPETRLYPQQSAAVHASSEAALSH CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA