| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is 78048256
Identifier: 78048256
GI number: 78048256
Start: 3057586
End: 3058965
Strand: Reverse
Name: 78048256
Synonym: XCV2700
Alternate gene names: NA
Gene position: 3058965-3057586 (Counterclockwise)
Preceding gene: 78048257
Following gene: 78048255
Centisome position: 59.07
GC content: 67.54
Gene sequence:
>1380_bases ATGATGGCCGCGCGCAGATCGGTCTCTGCGTTGCTTGCGGCGATCGCAACCATGAGCGTTCCCGCCTCGGCCGCCGACCG GGCTGCCGAACCCAATACGCAGGTGCCGGCGGGTTCGACGCATTATGTTGCCGATGGCTTCCCGGACCGCATCGTCGCCA CGCCGGCGCAGGACGCGGCCACAGGCTTTGCCGTGGCCTGGCGCACCGACGCCAGCGTCGACAGACCGTGGCTGGAACTG GTGGTCGCCGGCGATTCGCCGGATGTAGGCACGCCACGACGCATTCGGGCCAGCACGCTGACGCTTGCCAGCGAAAACGG CAGTTCGCATCACCATCGCGCCGATGTCGACGGGCTGCAGCCGGACACGATGTACGCGTACCGCTTGCAGGGGCAGGGGA CCTGGGGCGCGTGGAATCACTTCCGCACGGCTGCCACAGCCACCACGCCGCTGACCTTGCTGTATTTCGGCGATACCCAG AACAAGAATCTCAGTCTGGTCTCGCGGGTGATCCGTCAGGCCTGGCGCTCGGCGCCGGACGCCCGGCTGGCCTTGTTCGC CGGCGACCTGGTCAGCGGCAAGGACGGCCAGGACGACAACGAATGGGCCGAGTGGTTCGAGGCCGGGCGCTGGCTGCTGG AAGGCACTGCAGTGGCGCCGGCGCCGGGCAATCACGAATATCACGAAGAGGGCGAAGACACGCCGCAGGCAACCCGCGTG CTCGGCAGTCATTGGCCGGTGACCTTTGCGTTACCGCGCAACGGGCCTTCGGCCACCGCGCGCACCAGCTACTGGTTCGA CTACCAGGGCGTGCGCGTTGCCGTGCTCGACGGCACCTCGGCGCTGGACCTGGGGACCGGCCCCGCGCAGGCGCAGTGGC TGGACAAGGTGCTGGCCGACAACCCGCATCCCTGGTCGATCGTGCTGATCCACCAGCCATTCTTCTCGCCGCGTGCCGAT CGCGAAAACGAAAAGTTGGTCGCACAGGTGCTGCCGGTGATCCGACGCCACAAGGTGGATCTGGTGTTGCAGGGCCACGA CCACACCTACGGCCGACGCGGCGATGCGGCCGGGCAGGCGACGCCGGTCTTCGTGGTCTCGGTCGCCGGGCCCAAGCAGT ACCGCCTGTCGGACATGGCGCGCACCACCATGCGCCCGGTGGGCGAAGACACCCAGCTCTATCAGGTGCTGCGTCTGGAC AGCCAGCATCTGGTGTACGAATCGCGCACGGCCACCGGGCGTCTCTACGACGCGTTCGAACTGCAACGCGACAGCGACGG CAGCAAACGCTTGATCGAACGCGAGGCGGGACGCATCGCGCCACGCAATTGCCCGCGCAGTGCAACGCTCAAGGGGCGTG CGGATCGATGCTGGGAATGA
Upstream 100 bases:
>100_bases TTCCAGGTGGCGTGTTCTATGCGTTGCATGACGACCAGGCAGTGGCCGCGTTCGATTGGCGCGATATCGCGCGGACATTG CGCCTGAAAGAGTGCACGCC
Downstream 100 bases:
>100_bases GCGAGGGCAGGCAACAGCCTGCCCAAGCATTACCGTGCTACTGGCGGCTGGGCAGCAGTGCGCAGACGGTCTGCAAGCTG CACGTGGTTGCGTGTCCGCT
Product: putative phosphoesterase precursor
Products: NA
Alternate protein names: Purple Acid Phosphatase; Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Phosphohydrolase; N-Acetylmuramoyl-L-Alanine Amidase; Phosphatase; LPXTG-Motif Cell Wall Anchor Domain Protein; Ser/Thr Phosphatase Family Protein; Collagen Triple Helix Repeat Protein; Calcineurin-Like Phosphoesterase; Metallophosphoesterase Domain-Containing Protein; PA14 Domain Protein; Alpha-1 2-Mannosidase Family Protein; Ser/Thr Protein Phosphatase Family Protein Family
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MMAARRSVSALLAAIATMSVPASAADRAAEPNTQVPAGSTHYVADGFPDRIVATPAQDAATGFAVAWRTDASVDRPWLEL VVAGDSPDVGTPRRIRASTLTLASENGSSHHHRADVDGLQPDTMYAYRLQGQGTWGAWNHFRTAATATTPLTLLYFGDTQ NKNLSLVSRVIRQAWRSAPDARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEEGEDTPQATRV LGSHWPVTFALPRNGPSATARTSYWFDYQGVRVAVLDGTSALDLGTGPAQAQWLDKVLADNPHPWSIVLIHQPFFSPRAD RENEKLVAQVLPVIRRHKVDLVLQGHDHTYGRRGDAAGQATPVFVVSVAGPKQYRLSDMARTTMRPVGEDTQLYQVLRLD SQHLVYESRTATGRLYDAFELQRDSDGSKRLIEREAGRIAPRNCPRSATLKGRADRCWE
Sequences:
>Translated_459_residues MMAARRSVSALLAAIATMSVPASAADRAAEPNTQVPAGSTHYVADGFPDRIVATPAQDAATGFAVAWRTDASVDRPWLEL VVAGDSPDVGTPRRIRASTLTLASENGSSHHHRADVDGLQPDTMYAYRLQGQGTWGAWNHFRTAATATTPLTLLYFGDTQ NKNLSLVSRVIRQAWRSAPDARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEEGEDTPQATRV LGSHWPVTFALPRNGPSATARTSYWFDYQGVRVAVLDGTSALDLGTGPAQAQWLDKVLADNPHPWSIVLIHQPFFSPRAD RENEKLVAQVLPVIRRHKVDLVLQGHDHTYGRRGDAAGQATPVFVVSVAGPKQYRLSDMARTTMRPVGEDTQLYQVLRLD SQHLVYESRTATGRLYDAFELQRDSDGSKRLIEREAGRIAPRNCPRSATLKGRADRCWE >Mature_459_residues MMAARRSVSALLAAIATMSVPASAADRAAEPNTQVPAGSTHYVADGFPDRIVATPAQDAATGFAVAWRTDASVDRPWLEL VVAGDSPDVGTPRRIRASTLTLASENGSSHHHRADVDGLQPDTMYAYRLQGQGTWGAWNHFRTAATATTPLTLLYFGDTQ NKNLSLVSRVIRQAWRSAPDARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEEGEDTPQATRV LGSHWPVTFALPRNGPSATARTSYWFDYQGVRVAVLDGTSALDLGTGPAQAQWLDKVLADNPHPWSIVLIHQPFFSPRAD RENEKLVAQVLPVIRRHKVDLVLQGHDHTYGRRGDAAGQATPVFVVSVAGPKQYRLSDMARTTMRPVGEDTQLYQVLRLD SQHLVYESRTATGRLYDAFELQRDSDGSKRLIEREAGRIAPRNCPRSATLKGRADRCWE
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI32566472, Length=353, Percent_Identity=22.0963172804533, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50390; Mature: 50390
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAARRSVSALLAAIATMSVPASAADRAAEPNTQVPAGSTHYVADGFPDRIVATPAQDAA CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCC TGFAVAWRTDASVDRPWLELVVAGDSPDVGTPRRIRASTLTLASENGSSHHHRADVDGLQ CCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCC PDTMYAYRLQGQGTWGAWNHFRTAATATTPLTLLYFGDTQNKNLSLVSRVIRQAWRSAPD CCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC ARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEEGEDTPQATRV CEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCEECCCCCCCCCCCCCCCCHHHHHH LGSHWPVTFALPRNGPSATARTSYWFDYQGVRVAVLDGTSALDLGTGPAQAQWLDKVLAD HCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCEEECCCCCHHHHHHHHHHCC NPHPWSIVLIHQPFFSPRADRENEKLVAQVLPVIRRHKVDLVLQGHDHTYGRRGDAAGQA CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCC TPVFVVSVAGPKQYRLSDMARTTMRPVGEDTQLYQVLRLDSQHLVYESRTATGRLYDAFE CCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEEE LQRDSDGSKRLIEREAGRIAPRNCPRSATLKGRADRCWE ECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMAARRSVSALLAAIATMSVPASAADRAAEPNTQVPAGSTHYVADGFPDRIVATPAQDAA CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCC TGFAVAWRTDASVDRPWLELVVAGDSPDVGTPRRIRASTLTLASENGSSHHHRADVDGLQ CCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCC PDTMYAYRLQGQGTWGAWNHFRTAATATTPLTLLYFGDTQNKNLSLVSRVIRQAWRSAPD CCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC ARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEEGEDTPQATRV CEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCEECCCCCCCCCCCCCCCCHHHHHH LGSHWPVTFALPRNGPSATARTSYWFDYQGVRVAVLDGTSALDLGTGPAQAQWLDKVLAD HCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCEEECCCCCHHHHHHHHHHCC NPHPWSIVLIHQPFFSPRADRENEKLVAQVLPVIRRHKVDLVLQGHDHTYGRRGDAAGQA CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCC TPVFVVSVAGPKQYRLSDMARTTMRPVGEDTQLYQVLRLDSQHLVYESRTATGRLYDAFE CCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEEE LQRDSDGSKRLIEREAGRIAPRNCPRSATLKGRADRCWE ECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA