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The map label for this gene is yccS [C]

Identifier: 78047199

GI number: 78047199

Start: 1856000

End: 1857448

Strand: Reverse

Name: yccS [C]

Synonym: XCV1643

Alternate gene names: 78047199

Gene position: 1857448-1856000 (Counterclockwise)

Preceding gene: 78047200

Following gene: 78047198

Centisome position: 35.87

GC content: 69.22

Gene sequence:

>1449_bases
GTGCGGCTGGAGCTGCTGTCGTTGGCCGATGCCGAGACGCGCCTGACCGACTCGCAGGCGCGACCGGCGATCGAACGCGT
GCTCGAACGCAGCGCCATCGTGCTGGAACAGCTCGCGCACGCGATGACCATGGGTGAAGACCCGCAGGCCGCCAATGCCT
CGATGACCGGGTTCGACGATCTGGTCGGTGCATTGGCACAGTTTCAGCACGACAACGCCGACACGCGCGAACGCCGCCTG
GTGCGTGTCGCCGTCGCGCGCGCGCAAGGCCTGGGCGGCCAGCTGCGCGCGCTGATCCGCAACGCGCACTGGGCCAGCAG
CCGTGGCGAAATCCAGGCGCAACTGGCCGAAGCGCGGCTGCCGTCGGCGTTGCGCCCGGCCGCGACCTGGGCCACGTTGC
GCGCGAATCTGGACCTGTCGTCGGTCGCCTTCCGGCACGCGTTGCGTTGCGGCGTGTGCCTGGCGCTGGCCATCGCCTTC
CAGCGCTGGCAGCAGATTCCGCACGGCTTCTGGATTCCGATGACCACCGCCATCGTGCTCAAGCCCGATTTCGGCGGCAC
CTTCAGCTTTGGCGCGTTGCGCGTGGCCGGCACCTTCGTCGGACTATTGCTTGCCACCTTGCTCGCGCACCTGGCCATGG
ACGGCGCCAGCGTCCGCATGGCCCTGCTGGCGCTGTTTTGCCTCGGGTTTCGCTTGCTGACACAGGTGAACTACGGCATC
GGCGTGGCGTTTTTGACCGGCATGCTGGTGCTGCTGCTGTCCTTCGAAGGCGTTGCACCGGGCGAAGCGGTCGGCGCGCG
CCTGCAGGCGACAGTGGCCGGCAGCGCGCTGGCGCTGGTCGCCTATGCGTTGTGGCCCACGCGCGAACGCCGGCAGATTC
GCGCCTCGCTGGCGCACTTGCTCAGCGCATATCGCGACCATCTCCGCCATGTGCTGCTCGGCCAGATGGAGGGTCTGAGC
GATACGCGTGCCGCCGCGCGTGTTGCCCGCACCAATGCGCAGGCCTCGATCGAGCGTCTTCGCGGCGAACCGCGCAGCCG
CCGCAACCTGCAGGAGCTCAAGCTGGCCGAATCGCTGCTGGCCAATGGCAACCGGCTGATCCGCGCCAGCTTGTTGCTGG
AAGCGGCGCTGCGCGATGGCCATCCGTTGCCCACGCTGGACGCGCTGCCCATCTTCGCGCGGCAGGCCGATGAGGCGCTG
TCCGCGGTGATCGACTGCCTGCGCACTGGCGGTATTCCTGCCGCGACCACCTTGCGCAACGCCGAGCGCCAGCTTTCCGA
TGCGCTGGCCGCATTGCCCGACAGTTCCCCAACCACCGCCGCGCTGGCCGACACCATCGACCGCGTCACCGACAGCATCG
GCACGCTCACCCACCTGCTGCGCCCTGCCCGACCGGCCTCGGCCGATGCGCCGGCCGTGCATGACGGCGTGCACGATGCG
GGCAGGTAA

Upstream 100 bases:

>100_bases
GCAGGAAGTACTCGACGCGATGGTGATGCTGCACGGCGAGCATCGCTCGCGCGCGATCGCGGTGCAGAGCTTTCGCATCA
TCGCCGAGCTGTGAGATCGG

Downstream 100 bases:

>100_bases
ACTGCCGCCCTGATCCGTGTTGCGAGCCCGACGATGACCGACCTGCTGTCCCGCGCCCATGCTGTCGCCCTGGATGCCGC
CGACCCGCTGCGCGGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MRLELLSLADAETRLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALAQFQHDNADTRERRL
VRVAVARAQGLGGQLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAF
QRWQQIPHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASVRMALLALFCLGFRLLTQVNYGI
GVAFLTGMLVLLLSFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAHLLSAYRDHLRHVLLGQMEGLS
DTRAAARVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLLEAALRDGHPLPTLDALPIFARQADEAL
SAVIDCLRTGGIPAATTLRNAERQLSDALAALPDSSPTTAALADTIDRVTDSIGTLTHLLRPARPASADAPAVHDGVHDA
GR

Sequences:

>Translated_482_residues
MRLELLSLADAETRLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALAQFQHDNADTRERRL
VRVAVARAQGLGGQLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAF
QRWQQIPHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASVRMALLALFCLGFRLLTQVNYGI
GVAFLTGMLVLLLSFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAHLLSAYRDHLRHVLLGQMEGLS
DTRAAARVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLLEAALRDGHPLPTLDALPIFARQADEAL
SAVIDCLRTGGIPAATTLRNAERQLSDALAALPDSSPTTAALADTIDRVTDSIGTLTHLLRPARPASADAPAVHDGVHDA
GR
>Mature_482_residues
MRLELLSLADAETRLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALAQFQHDNADTRERRL
VRVAVARAQGLGGQLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAF
QRWQQIPHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASVRMALLALFCLGFRLLTQVNYGI
GVAFLTGMLVLLLSFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAHLLSAYRDHLRHVLLGQMEGLS
DTRAAARVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLLEAALRDGHPLPTLDALPIFARQADEAL
SAVIDCLRTGGIPAATTLRNAERQLSDALAALPDSSPTTAALADTIDRVTDSIGTLTHLLRPARPASADAPAVHDGVHDA
GR

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=233, Percent_Identity=25.7510729613734, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 51657; Mature: 51657

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLELLSLADAETRLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDD
CCEEHHHHCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LVGALAQFQHDNADTRERRLVRVAVARAQGLGGQLRALIRNAHWASSRGEIQAQLAEARL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHC
PSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAFQRWQQIPHGFWIPMTTAIVL
CCHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
KPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASVRMALLALFCLGFRLLTQVNYGI
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH
GVAFLTGMLVLLLSFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAHL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LSAYRDHLRHVLLGQMEGLSDTRAAARVARTNAQASIERLRGEPRSRRNLQELKLAESLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
ANGNRLIRASLLLEAALRDGHPLPTLDALPIFARQADEALSAVIDCLRTGGIPAATTLRN
HCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AERQLSDALAALPDSSPTTAALADTIDRVTDSIGTLTHLLRPARPASADAPAVHDGVHDA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCC
GR
CC
>Mature Secondary Structure
MRLELLSLADAETRLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDD
CCEEHHHHCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LVGALAQFQHDNADTRERRLVRVAVARAQGLGGQLRALIRNAHWASSRGEIQAQLAEARL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHC
PSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAFQRWQQIPHGFWIPMTTAIVL
CCHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE
KPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASVRMALLALFCLGFRLLTQVNYGI
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH
GVAFLTGMLVLLLSFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAHL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LSAYRDHLRHVLLGQMEGLSDTRAAARVARTNAQASIERLRGEPRSRRNLQELKLAESLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
ANGNRLIRASLLLEAALRDGHPLPTLDALPIFARQADEALSAVIDCLRTGGIPAATTLRN
HCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AERQLSDALAALPDSSPTTAALADTIDRVTDSIGTLTHLLRPARPASADAPAVHDGVHDA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCC
GR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]