| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is oprP1 [H]
Identifier: 78047175
GI number: 78047175
Start: 1832324
End: 1833574
Strand: Reverse
Name: oprP1 [H]
Synonym: XCV1619
Alternate gene names: 78047175
Gene position: 1833574-1832324 (Counterclockwise)
Preceding gene: 78047179
Following gene: 78047174
Centisome position: 35.41
GC content: 63.07
Gene sequence:
>1251_bases ATGAAACTCGCTCCCACCCTGCTTGGTTCCGCGCTGCTGCTGGCACTGGCCGCCCCTGCAGCACACGCCGAGATCGCCAT CGATGTGATCGGTGGTTCGGAAATCTCGCTGGAAGGCCTGGTCCAGGCCGACGGCAACTGGTTCCACAACGATGTGCAGG ACCTCAATGGCCCGATCGGTGCCAATGGCGACAATTCCGAATTCAGCATCCGGCGCGCCGAGCTGGTCCTCAAGGGCAAG GGCCCGGGCAACTTCGAATGGGTCGCCGGCTATGACCCGAGCGTGCTGAAGGAGGTCACCATCCGTGGCACCACCATTCG CAGCACTGGCCGCTTCCTGGATAACAACATCAAGTACAAGTTCGGCGGCAACGCGAACAATTACCTGCAGATCGGCCAGT TCAAGCAGCCCAACAGCCTGGAAGAACTGTCCAGCACCAAGAACAACGACTTCGTCTCCAAGGCGTCGGTGACCAACACC TATGGCATCTCGCGCCGGTTGGGCGTGGCCTATGGCATGGGCGACAACAATTGGAGCGTGACCGCCAGTGCATTCGGCCG CGAGCTGACCCGTAACCAGGCGCACGGCAACGGCTATGGCGCGCGCGGCACCTGGGCGCCGATCAACGAGACTGGCAACG TGCTGCACTTCGGCCTGAGCTACCTGGCCTACGACACCGACGACGACACCTTGCGCCTGCGCGCACGCCCCGACGCCGAC CTGACCACCGTTCGCCTGATCGACAGCGGCGCCATCACCAATGTGGACAACGTTGGCGTGGCCGGTGCCGAGGCGATGTG GATCACCGGGCCGTTCAAGCTGCAGAGCGAGTACTTCCAGGAAAACGCCAACCGCATCGGTGCCAATGCGCACGACTATA AGAGCGACGGCTGGTACGTGAGCGGCGTCTGGAACCTCACCGGCGAAACCTGGGGCTACAAGGCTGGCGTGCCGACCACC CCGCTGCCCAACGAGCCGGCATCGGGCATGTGGCAGCTGGCGGTGCGCTACGACACCCTGGACCTCAACGATGGCCACCT GGTCGCCAACGGCAACACACCGTTCGTCGATGGCGTGCTGGGCGGCAAGATGAACATCTGGACGGTCGGCGCCAATTGGT ACTGGCGCTCGAACTTCAAGTTCGCCCTCGACTACGCCAAGGTCGACAGCACCCGCTACAACAGCACCACCCGCGGCCTG GTCGACGATAACCCGTCGATCATCGAAGCACGCGCGCAGTTCTACTGGTAA
Upstream 100 bases:
>100_bases TTATTGGCAAAAATCACGTATTACGTTTTTGTTGTTTTGTCACATTAACGCAACCTTCACACCCTAGCCTGCGCCCACTT TCTCAGGTCGCAAGGCATCT
Downstream 100 bases:
>100_bases GTGCGTCGCTGCCGCGTGCGATCGGTCGAGCGCACGCGGTGGCAGCGCCGCCACTTCCTGCCGGCCTGAACATCCGACGG CGCAATGCCGTCATCGCCCT
Product: phosphate-selective porin P
Products: NA
Alternate protein names: Outer membrane protein D1 [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEISLEGLVQADGNWFHNDVQDLNGPIGANGDNSEFSIRRAELVLKGK GPGNFEWVAGYDPSVLKEVTIRGTTIRSTGRFLDNNIKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT YGISRRLGVAYGMGDNNWSVTASAFGRELTRNQAHGNGYGARGTWAPINETGNVLHFGLSYLAYDTDDDTLRLRARPDAD LTTVRLIDSGAITNVDNVGVAGAEAMWITGPFKLQSEYFQENANRIGANAHDYKSDGWYVSGVWNLTGETWGYKAGVPTT PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALDYAKVDSTRYNSTTRGL VDDNPSIIEARAQFYW
Sequences:
>Translated_416_residues MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEISLEGLVQADGNWFHNDVQDLNGPIGANGDNSEFSIRRAELVLKGK GPGNFEWVAGYDPSVLKEVTIRGTTIRSTGRFLDNNIKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT YGISRRLGVAYGMGDNNWSVTASAFGRELTRNQAHGNGYGARGTWAPINETGNVLHFGLSYLAYDTDDDTLRLRARPDAD LTTVRLIDSGAITNVDNVGVAGAEAMWITGPFKLQSEYFQENANRIGANAHDYKSDGWYVSGVWNLTGETWGYKAGVPTT PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALDYAKVDSTRYNSTTRGL VDDNPSIIEARAQFYW >Mature_416_residues MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEISLEGLVQADGNWFHNDVQDLNGPIGANGDNSEFSIRRAELVLKGK GPGNFEWVAGYDPSVLKEVTIRGTTIRSTGRFLDNNIKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT YGISRRLGVAYGMGDNNWSVTASAFGRELTRNQAHGNGYGARGTWAPINETGNVLHFGLSYLAYDTDDDTLRLRARPDAD LTTVRLIDSGAITNVDNVGVAGAEAMWITGPFKLQSEYFQENANRIGANAHDYKSDGWYVSGVWNLTGETWGYKAGVPTT PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALDYAKVDSTRYNSTTRGL VDDNPSIIEARAQFYW
Specific function: Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate [H]
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oprO/oprP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010870 [H]
Pfam domain/function: PF07396 Porin_O_P [H]
EC number: NA
Molecular weight: Translated: 45371; Mature: 45371
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEISLEGLVQADGNWFHNDVQDLNGPIG CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCHHHHCCCCCC ANGDNSEFSIRRAELVLKGKGPGNFEWVAGYDPSVLKEVTIRGTTIRSTGRFLDNNIKYK CCCCCCCEEEEEEEEEEECCCCCCEEEEECCCHHHHHEEEECCEEEECCCCHHCCCEEEE FGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNTYGISRRLGVAYGMGDNNWSV ECCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEECEEEEECCCCCCEE TASAFGRELTRNQAHGNGYGARGTWAPINETGNVLHFGLSYLAYDTDDDTLRLRARPDAD EHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCC LTTVRLIDSGAITNVDNVGVAGAEAMWITGPFKLQSEYFQENANRIGANAHDYKSDGWYV CEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE SGVWNLTGETWGYKAGVPTTPLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVL EEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCCEEEEEC GGKMNIWTVGANWYWRSNFKFALDYAKVDSTRYNSTTRGLVDDNPSIIEARAQFYW CCCEEEEEECCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEISLEGLVQADGNWFHNDVQDLNGPIG CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCHHHHCCCCCC ANGDNSEFSIRRAELVLKGKGPGNFEWVAGYDPSVLKEVTIRGTTIRSTGRFLDNNIKYK CCCCCCCEEEEEEEEEEECCCCCCEEEEECCCHHHHHEEEECCEEEECCCCHHCCCEEEE FGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNTYGISRRLGVAYGMGDNNWSV ECCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEECEEEEECCCCCCEE TASAFGRELTRNQAHGNGYGARGTWAPINETGNVLHFGLSYLAYDTDDDTLRLRARPDAD EHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCC LTTVRLIDSGAITNVDNVGVAGAEAMWITGPFKLQSEYFQENANRIGANAHDYKSDGWYV CEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE SGVWNLTGETWGYKAGVPTTPLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVL EEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCCEEEEEC GGKMNIWTVGANWYWRSNFKFALDYAKVDSTRYNSTTRGLVDDNPSIIEARAQFYW CCCEEEEEECCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1697017; 1406271; 10984043; 2456446; 2451538; 3017428 [H]