| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is pstS [H]
Identifier: 78047173
GI number: 78047173
Start: 1829674
End: 1830765
Strand: Reverse
Name: pstS [H]
Synonym: XCV1617
Alternate gene names: 78047173
Gene position: 1830765-1829674 (Counterclockwise)
Preceding gene: 78047174
Following gene: 78047172
Centisome position: 35.35
GC content: 65.48
Gene sequence:
>1092_bases ATGAAATTGCAGTCGGCCAGCCTGACCGCCCTGTCCCTCACCATCGCCCTCGCCCTGGCCGCGTGCTCGCCCGGCAAGGA CGCGCAGTCCGCAGACGCCGCAAAGGGCGCGCCGACCGCAGGCGCCACCGCCAGCGACAGCAAGGGCGCTGAAATTTCCG GCGCCGGTGCGTCCTTCATCTATCCGCTGGTGTCCAAGTGGTCGGCCGACTACAACGCCGCCACCGGCAACAAGGTCAAC TACCAGTCGATCGGCTCCGGCGGCGGCATTGCGCAGATCAAGGCCGGCACCGTGGATTTCGGCTCGACCGACAAACCGCT GGACAGCACGGAACTGCAACAGGCTGGCCTGGGCCAGTTCCCGTCCGCCATCGGCGGCGTGGTGCCGGTGGTGAATCTGG AAGGCATCGCGCCGGGCAAGCTGCGCCTGACCGGCGCCCTGCTGGGCGATATCTTCCTGGGCAAGGTCACCATGTGGAAC GATGCGGCCATTGTGGCGGCCAACCCGGGCGTGACCCTGCCGGCCACCAAGATCAACCTGGTGCATCGCTCGGATGGTTC GGGCACCACCTTCAACTTCTCCAACTACCTGTCCAAGGTCAGCCCGGAGTGGAAGAGCAAGGTCGGCGAAGGCACCTCGG TGCAGTGGCCGGGCGGCGTGGGTGGCAAGGGCAACGAAGGCGTTGCCTCGTATGTGCAGCAGATCAAGGGCTCGATCGGT TACGTCGAGCTGGCCTACGCCCTGCAGAACAAGATGCCGTACACCTCGCTGCAGAACGCGGCCGGCCAGTGGGTCGAGCC GAACGCGGAAAGCTTTGCCGCCGCCGCTGCCAGCGCCGACTGGGCCAACGCCCGTGACTTCAACCTGGTGATCACCAATG CGCCGGGCGAGAAGGCGTGGCCGATCACCGCGACCAACTTCATGTTGATGCACAAGCAATCCAAGGACGCCGCGCGCAGC AAGGCGACGCTGGACTTCTTCAAGTGGGCGCTGGAAAACGGCCAGGCCCAGGCCAGCGAATTGCACTACGTGCCGCTGCC GCCGGAGCTGGTGAAGCAGATCGAAGCCTATTGGGGCAGCGAGTTCAAGTAA
Upstream 100 bases:
>100_bases GATGCGTTGGCCAGAAGGCACTGTCATGCAGGTGTAACAAAAACATCATTTCATAGTGTGGTCTGCCGGAGACACCGGCC AATCCAGCCTCGGAGCTTCC
Downstream 100 bases:
>100_bases TGCCCTGCACCCGCCCATGCGGCGGGCTGCGCTGCGGCGAGGTACCTGAAGGTGCCTCGCCGTTCCTGCTGTCTCACGCT CCCGCCATTGCGCGGGTGAC
Product: ABC transporter phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKLQSASLTALSLTIALALAACSPGKDAQSADAAKGAPTAGATASDSKGAEISGAGASFIYPLVSKWSADYNAATGNKVN YQSIGSGGGIAQIKAGTVDFGSTDKPLDSTELQQAGLGQFPSAIGGVVPVVNLEGIAPGKLRLTGALLGDIFLGKVTMWN DAAIVAANPGVTLPATKINLVHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG YVELAYALQNKMPYTSLQNAAGQWVEPNAESFAAAAASADWANARDFNLVITNAPGEKAWPITATNFMLMHKQSKDAARS KATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGSEFK
Sequences:
>Translated_363_residues MKLQSASLTALSLTIALALAACSPGKDAQSADAAKGAPTAGATASDSKGAEISGAGASFIYPLVSKWSADYNAATGNKVN YQSIGSGGGIAQIKAGTVDFGSTDKPLDSTELQQAGLGQFPSAIGGVVPVVNLEGIAPGKLRLTGALLGDIFLGKVTMWN DAAIVAANPGVTLPATKINLVHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG YVELAYALQNKMPYTSLQNAAGQWVEPNAESFAAAAASADWANARDFNLVITNAPGEKAWPITATNFMLMHKQSKDAARS KATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGSEFK >Mature_363_residues MKLQSASLTALSLTIALALAACSPGKDAQSADAAKGAPTAGATASDSKGAEISGAGASFIYPLVSKWSADYNAATGNKVN YQSIGSGGGIAQIKAGTVDFGSTDKPLDSTELQQAGLGQFPSAIGGVVPVVNLEGIAPGKLRLTGALLGDIFLGKVTMWN DAAIVAANPGVTLPATKINLVHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG YVELAYALQNKMPYTSLQNAAGQWVEPNAESFAAAAASADWANARDFNLVITNAPGEKAWPITATNFMLMHKQSKDAARS KATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGSEFK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=314, Percent_Identity=51.2738853503185, Blast_Score=330, Evalue=9e-92,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37708; Mature: 37708
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQSASLTALSLTIALALAACSPGKDAQSADAAKGAPTAGATASDSKGAEISGAGASFI CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH YPLVSKWSADYNAATGNKVNYQSIGSGGGIAQIKAGTVDFGSTDKPLDSTELQQAGLGQF HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECEECCCCCCCCCCHHHHHHCCCCCC PSAIGGVVPVVNLEGIAPGKLRLTGALLGDIFLGKVTMWNDAAIVAANPGVTLPATKINL HHHHCCCEEEEEECCCCCCCEEEHHHHHHHHHHCEEEEECCEEEEEECCCCCCCCEEEEE VHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG EEECCCCCCEEEHHHHHHHCCCHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCC YVELAYALQNKMPYTSLQNAAGQWVEPNAESFAAAAASADWANARDFNLVITNAPGEKAW CEEHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC PITATNFMLMHKQSKDAARSKATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGS CEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCCHHHHHHHHHHHCC EFK CCC >Mature Secondary Structure MKLQSASLTALSLTIALALAACSPGKDAQSADAAKGAPTAGATASDSKGAEISGAGASFI CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH YPLVSKWSADYNAATGNKVNYQSIGSGGGIAQIKAGTVDFGSTDKPLDSTELQQAGLGQF HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECEECCCCCCCCCCHHHHHHCCCCCC PSAIGGVVPVVNLEGIAPGKLRLTGALLGDIFLGKVTMWNDAAIVAANPGVTLPATKINL HHHHCCCEEEEEECCCCCCCEEEHHHHHHHHHHCEEEEECCEEEEEECCCCCCCCEEEEE VHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG EEECCCCCCEEEHHHHHHHCCCHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCC YVELAYALQNKMPYTSLQNAAGQWVEPNAESFAAAAASADWANARDFNLVITNAPGEKAW CEEHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC PITATNFMLMHKQSKDAARSKATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGS CEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCCHHHHHHHHHHHCC EFK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]