| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is phoU [H]
Identifier: 78047169
GI number: 78047169
Start: 1826026
End: 1826736
Strand: Reverse
Name: phoU [H]
Synonym: XCV1613
Alternate gene names: 78047169
Gene position: 1826736-1826026 (Counterclockwise)
Preceding gene: 78047170
Following gene: 78047168
Centisome position: 35.28
GC content: 63.15
Gene sequence:
>711_bases ATGAACCAGCACCTCAACGACCATATCGTCAAAAGCTACGACGAGGAGCAGCACCGTCTTGTCGCCGAGATCGTGCGCAT GGGCGAGACGGCGGTGGCGCAGCTGGAAGCCGCACTGGATGTGGTGGAGCGTCGCGATGACAACGCCGCGCACCGCATCG TGGTCAACGACGAGGCGATCGACGCACTGGAGCATGCGATCAGCCACGACGTGATGCGGCTTGCATTGCGCGGCCCGATG GCGCGCGATCTGCGTGAAATTCTTGCAGGCCTGCGGATTCCGGCCGATATCGAACGTATCGGCGATTACGCGGCCAACGT GGCCAAGCGCTCGATCGCGCTCAATTCCGCACCGCCGCTGCCGCAGACCGTGGGCCTGCGCGCGCTTGGCCAGATGGCGG CCGATGCCGTGCGCGAAGCCGTACAGGCGTATCGCAACAAAGATGCCGATGCGGCGATCCGTGTCCGCGACGAAGATGCA CGCCTGGATGCGCAGTACACCGCGTTGTTCCGCGAGCTGCTCACCTACATGATGGAAGACCCGCGCAATATCACTCCGTG TACGCATCTGCTGTTCATGGCAAAGAATCTGGAACGCATTGGCGACCACGCCACCAACATCGCCGAGAACGTGTGGTTCC TGGTGCATGGCGAGCAGCCCTTGCCTCCGCGGGTGAAGCGCGACGACACCAGCAGCACCGGCGTCATCTAG
Upstream 100 bases:
>100_bases TGACGCAGTTCCGCCGCACCGCCCGGCACGACATTTGCATCATGTGCCATGTCGCCAAGGTTACGGCGGACATCCACCAC TGCCACGAATCGAGACCACG
Downstream 100 bases:
>100_bases ACCGCGGCAGCGTTGCCGTGAGGCGCCGCAAGGCCTTCTCATTACGTATTCAGCTTGAAACTTCTACGGTGCAGCTGCAC AGGCATTTCCTGTGACCCAG
Product: phosphate transport system regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAIDALEHAISHDVMRLALRGPM ARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPLPQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDA RLDAQYTALFRELLTYMMEDPRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVI
Sequences:
>Translated_236_residues MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAIDALEHAISHDVMRLALRGPM ARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPLPQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDA RLDAQYTALFRELLTYMMEDPRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVI >Mature_236_residues MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAIDALEHAISHDVMRLALRGPM ARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPLPQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDA RLDAQYTALFRELLTYMMEDPRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVI
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=216, Percent_Identity=32.4074074074074, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26392; Mature: 26392
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAI CCCCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH DALEHAISHDVMRLALRGPMARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDARLDAQYTALFRELLTYMMED CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHC PRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAI CCCCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH DALEHAISHDVMRLALRGPMARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDARLDAQYTALFRELLTYMMED CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHC PRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]