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The map label for this gene is foxA [H]

Identifier: 78047049

GI number: 78047049

Start: 1680445

End: 1681686

Strand: Reverse

Name: foxA [H]

Synonym: XCV1493

Alternate gene names: 78047049

Gene position: 1681686-1680445 (Counterclockwise)

Preceding gene: 78047050

Following gene: 78047048

Centisome position: 32.47

GC content: 64.09

Gene sequence:

>1242_bases
ATGCGCCCCACGCTTCTTGTCACCGCGCTCGCCGCTGCGCTCGCTCTGCACACCCTGCCCGCCTTCGCTCAACACACCAC
CACGCCAGCCGTGACCGAGCTGGATGGCGTGGATGTCATCGGCCGTGCGCAGACGCTCTACAAGTCCGAAGACGCAGCTG
TTGCCACGCGCACCGATACCCCGCTGGCACTGGTGCCGCAGTCGGTGCAGGTGCTGCCGCGCGAGTTGATCGACGACCAG
GCTGCGCGGCAGATCACCGATCTGTATCGCAGCATCAGTGGCATCAGCTTCTTCAGCTATGCCGGTGTGACCTTGCGCGG
TTTCCGCCAGGAAAACGTGCTGTACGACGGCCTGCGTGGCGACCCGTATGCCGGGTTCTCGGTGCCGCAGCTGTTCAACA
TCGAGCGTGTGGAAGTGCTCAAGGGTCCAGCCGGTGCGCTGTACGGCGGTGGCGAACCCGGGGGTGTGATCAACTATGTC
ACGCGCAAACCCGCTCATCAGGCGGCGCGACGCATCGAGCTGCAGCTGGGCAATCAATCCTTCGGTGCAGCCTCGTTCGA
GGCCACCGGCCCTGCGCGCGCAGATGGCCGCATCCGGTACCGCATCGGCGCCTATGCCGATGGCGAAGACGGGTTTCGTT
GGAATACCGACAGCCAGAGCCAGATCGGCGATGCGTCGGTGGCCTTCGATCTGGGCGATACCGGCGAGCTCACCCTGCAA
TACACCGACATCACCCAAAACCTGGGCGGCAACCGCCTACGTGGCGTGCCGGTGGATAACGCCGGCAACTTCCTCACCGA
CCGGCGCTGGAACCACAACGAACCCACAGATTTCCTGGACATGCGCGCCAAGGTGGCGCTTGCGCAATATCGGTTTGCGC
CGTCCAGCGCGTGGGAGGTGGACATGGCGCTGCGCTGGTTCAAGAACCAGGAGCATCAGATCTATCACGAGCCAATGGGG
TTGATCGACCGCGATCGCGACGGCACCGCCGAGTGGATGACCCGGCAGCTGCGCAATCAATACCGCGACAACGATGCGAT
CTCCAGCAACGTCAACGCGATATTCCGCACCAGTACCGGGGCAATCGACCACACGTTGCTGATGGGCGCGGACTACTATC
GCCTGGACGCGGATTTCCGCGCGCAAACCGCCAACACCGCCGACACCGGACGCGTACGTGGCCCGGTGCCCGGCATCAAT
CTGTTCAACCCGGTGTACGGCCGCAGCGGCTTCTACGACTAG

Upstream 100 bases:

>100_bases
CATCTGCCACCAAACAGGGTGCCCAACGCCCGGCGACCTCCGTGATCAAGCAAACACATCATGCTAAAATGCATTTGATA
ACCATTCCCATTAGTGACCA

Downstream 100 bases:

>100_bases
GGCTTGGATGCCCTGCCCTGGCGCGCCACCAGCACGCGCAGTCAACGCTACGGTGCATATCTGCAGGACGAACTCACGCT
GACGCCGCGCTGGTATGCAA

Product: TonB-dependent outer membrane receptor (N-terminal fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MRPTLLVTALAAALALHTLPAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDTPLALVPQSVQVLPRELIDDQ
AARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYV
TRKPAHQAARRIELQLGNQSFGAASFEATGPARADGRIRYRIGAYADGEDGFRWNTDSQSQIGDASVAFDLGDTGELTLQ
YTDITQNLGGNRLRGVPVDNAGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEVDMALRWFKNQEHQIYHEPMG
LIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTGAIDHTLLMGADYYRLDADFRAQTANTADTGRVRGPVPGIN
LFNPVYGRSGFYD

Sequences:

>Translated_413_residues
MRPTLLVTALAAALALHTLPAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDTPLALVPQSVQVLPRELIDDQ
AARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYV
TRKPAHQAARRIELQLGNQSFGAASFEATGPARADGRIRYRIGAYADGEDGFRWNTDSQSQIGDASVAFDLGDTGELTLQ
YTDITQNLGGNRLRGVPVDNAGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEVDMALRWFKNQEHQIYHEPMG
LIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTGAIDHTLLMGADYYRLDADFRAQTANTADTGRVRGPVPGIN
LFNPVYGRSGFYD
>Mature_413_residues
MRPTLLVTALAAALALHTLPAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDTPLALVPQSVQVLPRELIDDQ
AARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYV
TRKPAHQAARRIELQLGNQSFGAASFEATGPARADGRIRYRIGAYADGEDGFRWNTDSQSQIGDASVAFDLGDTGELTLQ
YTDITQNLGGNRLRGVPVDNAGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEVDMALRWFKNQEHQIYHEPMG
LIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTGAIDHTLLMGADYYRLDADFRAQTANTADTGRVRGPVPGIN
LFNPVYGRSGFYD

Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=461, Percent_Identity=22.5596529284165, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787024, Length=198, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787344, Length=326, Percent_Identity=25.7668711656442, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 45550; Mature: 45550

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTLLVTALAAALALHTLPAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCC
PLALVPQSVQVLPRELIDDQAARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRG
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCEEECCCC
DPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYVTRKPAHQAARRIELQLGNQS
CCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHEEEEEECCCC
FGAASFEATGPARADGRIRYRIGAYADGEDGFRWNTDSQSQIGDASVAFDLGDTGELTLQ
CCCCCCCCCCCCCCCCEEEEEEECEECCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEE
YTDITQNLGGNRLRGVPVDNAGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEV
EECHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
DMALRWFKNQEHQIYHEPMGLIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTG
HHHHHHHCCCCCEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCC
AIDHTLLMGADYYRLDADFRAQTANTADTGRVRGPVPGINLFNPVYGRSGFYD
CCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPTLLVTALAAALALHTLPAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCC
PLALVPQSVQVLPRELIDDQAARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRG
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCEEECCCC
DPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYVTRKPAHQAARRIELQLGNQS
CCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHEEEEEECCCC
FGAASFEATGPARADGRIRYRIGAYADGEDGFRWNTDSQSQIGDASVAFDLGDTGELTLQ
CCCCCCCCCCCCCCCCEEEEEEECEECCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEE
YTDITQNLGGNRLRGVPVDNAGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEV
EECHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
DMALRWFKNQEHQIYHEPMGLIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTG
HHHHHHHCCCCCEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCC
AIDHTLLMGADYYRLDADFRAQTANTADTGRVRGPVPGINLFNPVYGRSGFYD
CCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 10103258; 7642488 [H]