Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is yqkF [H]
Identifier: 78045161
GI number: 78045161
Start: 992957
End: 993982
Strand: Direct
Name: yqkF [H]
Synonym: CHY_1118
Alternate gene names: 78045161
Gene position: 992957-993982 (Clockwise)
Preceding gene: 78044405
Following gene: 78045103
Centisome position: 41.35
GC content: 44.25
Gene sequence:
>1026_bases ATGGAATATCGAAAAATTGGTAAAAGCGGACTTAAAGTCAGCCGTCTTGGTTTTGGAGGGATTCCTATTCAAAGGGTGGA ACTTCGGGATGTACGGCCGGTTTTGGATGTCTTAAAAGAGGGGGGAGTTAATTTTATTGACTCTGCCCGGGCTTATACGG TAAGTGAAGGTTTTATCGGTGAGGCGATAAAGCACGACCGCAAAGATTGGATAGTGGCAACGAAGTCAATGGCCAGAACT TATTCCGAAATGGCCAGGGATATTGATATTTCGCTTGCTGAACTTCAAACCGATTATATTGATATTTATCAGCTTCATAA TATCAAAAGTGAGGAAGAGATGGACAAGGTTTTAGCACCCGGTGGGGCTTTGGAAGCTTTGGTGGAGGCCAAAAAAGCGG GAAAAATTCGGGCTATTGGGGTTACCACCCATAATAAAGATTTATTAAAAAAGCTTTTAGCGGCTTTTAAGTTTGAAACG ATGATGTTACCGTTAAATTTGGTGGAAACCGATAAAGAAGATGCGTTTATTCATGCGCAAGAATTAGGGGTTGGCACCAT TGCTATGAAGCCTTTAGCCGGGGGCTTTTTTGGTGAAAACCGGGAGTTTCCGGCGGATGTGGCTCTTTATTATTTAAAAA ACTTTTCTGCCGTTGATGTTGTTCTGGTTGGGATGGCGGATGTAAACGAAGCCCGGCAAAACCTTGACATATTTAATTCG GAAGTGGATTTAGCGGCGAAGATGGAAGCTTTAAAAGAAAAAGCTTCCTTTGCTGCCCGGGAGTTTTGTCGCCGCTGTGG CTACTGCCAGCCCTGTCCGGTGGGGATTGGCATTCCTACAATTTTTGTGTTAGAAACTTATTACGACCGCTACGGCCTTC CTGGCTGGGCAAAGGAACGCTACAAAAATCTAACGGTTAAAGCCGATGCCTGTCAGGAGTGTGGCCTTTGCGAAGCACGC TGTCCTTATGGACTTCCTATTAGACGGAAACTTAAAGAAGTTCACCGGAAGCTTTCTTTAAAGTAA
Upstream 100 bases:
>100_bases GGTTGTGGTGCAGGAAAGAACTGAGCTCAATATAAATTTTAGGCTTTAAGTGTTATAATATTTTTATGATAAAAGATGCA CATCAAGAGGAGTGGAGATG
Downstream 100 bases:
>100_bases TTAGGGCTTCTTTAAAATCTCGAGGAAGAGGAGCGTATAAACTAATCGTTTTCTTTGTTATGGGGTGCGGGAAGGAAATA TAGTAAAGGTGCAATGCCTG
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MEYRKIGKSGLKVSRLGFGGIPIQRVELRDVRPVLDVLKEGGVNFIDSARAYTVSEGFIGEAIKHDRKDWIVATKSMART YSEMARDIDISLAELQTDYIDIYQLHNIKSEEEMDKVLAPGGALEALVEAKKAGKIRAIGVTTHNKDLLKKLLAAFKFET MMLPLNLVETDKEDAFIHAQELGVGTIAMKPLAGGFFGENREFPADVALYYLKNFSAVDVVLVGMADVNEARQNLDIFNS EVDLAAKMEALKEKASFAAREFCRRCGYCQPCPVGIGIPTIFVLETYYDRYGLPGWAKERYKNLTVKADACQECGLCEAR CPYGLPIRRKLKEVHRKLSLK
Sequences:
>Translated_341_residues MEYRKIGKSGLKVSRLGFGGIPIQRVELRDVRPVLDVLKEGGVNFIDSARAYTVSEGFIGEAIKHDRKDWIVATKSMART YSEMARDIDISLAELQTDYIDIYQLHNIKSEEEMDKVLAPGGALEALVEAKKAGKIRAIGVTTHNKDLLKKLLAAFKFET MMLPLNLVETDKEDAFIHAQELGVGTIAMKPLAGGFFGENREFPADVALYYLKNFSAVDVVLVGMADVNEARQNLDIFNS EVDLAAKMEALKEKASFAAREFCRRCGYCQPCPVGIGIPTIFVLETYYDRYGLPGWAKERYKNLTVKADACQECGLCEAR CPYGLPIRRKLKEVHRKLSLK >Mature_341_residues MEYRKIGKSGLKVSRLGFGGIPIQRVELRDVRPVLDVLKEGGVNFIDSARAYTVSEGFIGEAIKHDRKDWIVATKSMART YSEMARDIDISLAELQTDYIDIYQLHNIKSEEEMDKVLAPGGALEALVEAKKAGKIRAIGVTTHNKDLLKKLLAAFKFET MMLPLNLVETDKEDAFIHAQELGVGTIAMKPLAGGFFGENREFPADVALYYLKNFSAVDVVLVGMADVNEARQNLDIFNS EVDLAAKMEALKEKASFAAREFCRRCGYCQPCPVGIGIPTIFVLETYYDRYGLPGWAKERYKNLTVKADACQECGLCEAR CPYGLPIRRKLKEVHRKLSLK
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=224, Percent_Identity=32.1428571428571, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI24646159, Length=170, Percent_Identity=32.9411764705882, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646155, Length=207, Percent_Identity=31.8840579710145, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38143; Mature: 38143
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRKIGKSGLKVSRLGFGGIPIQRVELRDVRPVLDVLKEGGVNFIDSARAYTVSEGFIG CCHHHHCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH EAIKHDRKDWIVATKSMARTYSEMARDIDISLAELQTDYIDIYQLHNIKSEEEMDKVLAP HHHHCCCHHHEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC GGALEALVEAKKAGKIRAIGVTTHNKDLLKKLLAAFKFETMMLPLNLVETDKEDAFIHAQ CHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEECHHCCCCCCCCEEEHH ELGVGTIAMKPLAGGFFGENREFPADVALYYLKNFSAVDVVLVGMADVNEARQNLDIFNS HCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEHEEEECHHHHHHHHHHHHHHCC EVDLAAKMEALKEKASFAAREFCRRCGYCQPCPVGIGIPTIFVLETYYDRYGLPGWAKER CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH YKNLTVKADACQECGLCEARCPYGLPIRRKLKEVHRKLSLK HCCCEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MEYRKIGKSGLKVSRLGFGGIPIQRVELRDVRPVLDVLKEGGVNFIDSARAYTVSEGFIG CCHHHHCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH EAIKHDRKDWIVATKSMARTYSEMARDIDISLAELQTDYIDIYQLHNIKSEEEMDKVLAP HHHHCCCHHHEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC GGALEALVEAKKAGKIRAIGVTTHNKDLLKKLLAAFKFETMMLPLNLVETDKEDAFIHAQ CHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEECHHCCCCCCCCEEEHH ELGVGTIAMKPLAGGFFGENREFPADVALYYLKNFSAVDVVLVGMADVNEARQNLDIFNS HCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEHEEEECHHHHHHHHHHHHHHCC EVDLAAKMEALKEKASFAAREFCRRCGYCQPCPVGIGIPTIFVLETYYDRYGLPGWAKER CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH YKNLTVKADACQECGLCEARCPYGLPIRRKLKEVHRKLSLK HCCCEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]