Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
---|---|
Accession | NC_007503 |
Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78044368
Identifier: 78044368
GI number: 78044368
Start: 1061268
End: 1061999
Strand: Direct
Name: 78044368
Synonym: CHY_1193
Alternate gene names: NA
Gene position: 1061268-1061999 (Clockwise)
Preceding gene: 78043563
Following gene: 78043780
Centisome position: 44.19
GC content: 36.2
Gene sequence:
>732_bases ATGAAAGAAATTCAGATATTCTCTGGATTTAGCCATGTTATATTAGAAGTGTTTATAGCTTTTTTACCCCTTGTGATTAT GTTTTTAATATTTCAATTTTGGCTGTTAAAATTTCCAAAATATAAAGTCTTAAATATTTTTAAGGGTTTGGTTTTAACGT TTATTGGTTTAGTCATTTTTTTACAGGGAGTTTATGTTAGCTTTTTTCCCGTTGGCAAAACAATAGGAGTAGCTTTAGGT AGTTTAGAACACAATTGGGTATTGATACCAATAGGTTTTATTTTGGGTTTTGTAGCTACATTTGCCGAGCCTGCCGTACG GGTGCTAACTTATGAAGTAGAAAAGGCCTCGGGAGGATATATCCCAAAACAAATAATGCTCTATACTTTATCTTTGGGAG TGGCTATCTCAATTTCTTTAGCGATGGGGCGAATTATCTATGGAATCCCTCTATGGTACTTTATCATTCCAGGCTATTTA ACCGCTTTTATAATTATGCATTACTCTACACCCGAATTTATCGCAATTGCTTTTGATTCTGGAGGAGTGGCCACCGGACC TATGACCGTAACTTTTATCTCGGCTGTAGCGTTAGGTGTTGCTTCGGTTATAGAAGGACGAAATCCGTTGATAGAAGGAT TTGGGATGATTTCCTTGGTAGCTCTTTCACCAATTTTAACAGTTTTGCTTTTAGGACTGCTCTTTACTAGAAAGGAGAGC AAGGATGAGTAA
Upstream 100 bases:
>100_bases TTTTAGGAGGTAAAAGCGCATCATCCGATGGCTTTGGACTTATAGCCTTAGCTTCTGTTGGACCTATTTTAGCAGTATTG TTGCTTGGGGTGATTTATCG
Downstream 100 bases:
>100_bases AATTTTAAGTAAGTGTAAACTTATAATAGCCATTGTTAATTATGGTGTAGCAAGAAAAGTAGTTAAGGCTTCTAAGGAAT CTGGGGCCGAAGGTGCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKEIQIFSGFSHVILEVFIAFLPLVIMFLIFQFWLLKFPKYKVLNIFKGLVLTFIGLVIFLQGVYVSFFPVGKTIGVALG SLEHNWVLIPIGFILGFVATFAEPAVRVLTYEVEKASGGYIPKQIMLYTLSLGVAISISLAMGRIIYGIPLWYFIIPGYL TAFIIMHYSTPEFIAIAFDSGGVATGPMTVTFISAVALGVASVIEGRNPLIEGFGMISLVALSPILTVLLLGLLFTRKES KDE
Sequences:
>Translated_243_residues MKEIQIFSGFSHVILEVFIAFLPLVIMFLIFQFWLLKFPKYKVLNIFKGLVLTFIGLVIFLQGVYVSFFPVGKTIGVALG SLEHNWVLIPIGFILGFVATFAEPAVRVLTYEVEKASGGYIPKQIMLYTLSLGVAISISLAMGRIIYGIPLWYFIIPGYL TAFIIMHYSTPEFIAIAFDSGGVATGPMTVTFISAVALGVASVIEGRNPLIEGFGMISLVALSPILTVLLLGLLFTRKES KDE >Mature_243_residues MKEIQIFSGFSHVILEVFIAFLPLVIMFLIFQFWLLKFPKYKVLNIFKGLVLTFIGLVIFLQGVYVSFFPVGKTIGVALG SLEHNWVLIPIGFILGFVATFAEPAVRVLTYEVEKASGGYIPKQIMLYTLSLGVAISISLAMGRIIYGIPLWYFIIPGYL TAFIIMHYSTPEFIAIAFDSGGVATGPMTVTFISAVALGVASVIEGRNPLIEGFGMISLVALSPILTVLLLGLLFTRKES KDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26716; Mature: 26716
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIQIFSGFSHVILEVFIAFLPLVIMFLIFQFWLLKFPKYKVLNIFKGLVLTFIGLVIF CCCEEHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LQGVYVSFFPVGKTIGVALGSLEHNWVLIPIGFILGFVATFAEPAVRVLTYEVEKASGGY HHHHHHHHHCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEHHCCCCC IPKQIMLYTLSLGVAISISLAMGRIIYGIPLWYFIIPGYLTAFIIMHYSTPEFIAIAFDS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC GGVATGPMTVTFISAVALGVASVIEGRNPLIEGFGMISLVALSPILTVLLLGLLFTRKES CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KDE CCC >Mature Secondary Structure MKEIQIFSGFSHVILEVFIAFLPLVIMFLIFQFWLLKFPKYKVLNIFKGLVLTFIGLVIF CCCEEHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LQGVYVSFFPVGKTIGVALGSLEHNWVLIPIGFILGFVATFAEPAVRVLTYEVEKASGGY HHHHHHHHHCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEHHCCCCC IPKQIMLYTLSLGVAISISLAMGRIIYGIPLWYFIIPGYLTAFIIMHYSTPEFIAIAFDS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC GGVATGPMTVTFISAVALGVASVIEGRNPLIEGFGMISLVALSPILTVLLLGLLFTRKES CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KDE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA