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The map label for this gene is yibD [C]

Identifier: 78043710

GI number: 78043710

Start: 867015

End: 869516

Strand: Direct

Name: yibD [C]

Synonym: CHY_0980

Alternate gene names: 78043710

Gene position: 867015-869516 (Clockwise)

Preceding gene: 78043771

Following gene: 78044274

Centisome position: 36.1

GC content: 28.26

Gene sequence:

>2502_bases
TTGAATAAAAAAATATGTTTTATAACATGTGTAAATAATAATAAACTATATGAAGAGTGTTTAAAATATATAAATAATTT
AAGGGTTCCCGAGGGATATGAAATCGAAATAAAAATAATAAAAAATGCGAAAAGTCTAACATCAGGTTATAATGAAGGGA
TGCTAAGTAGTGATGCAAAATATAAAGTATATTTGCACCAAGATACATTTATCATAAATAAAAACTTTATAAATGATATA
TTAAAAATATTTGATAAAGATAAAACAATAGGTATGATTGGGGTAGTTGGAGCGAAAACTTTACCGATAAATGCTGTATG
GTGGCATTCAAATAAAAAATATGGAAAAGTTTATGAAAATCGAACTGGTGAGATTGAATTATTGGCATTTAATGAGGTTG
AAGGAGATTTTGAAGAAGTAAAGGTAATTGATGGACTGATTATGATAACGCAATATGATATTCCCTGGAGAGAAGATATA
TTTACTGGCTGGCACTTTTATGACTTGTCGCAATGTATGGAATTTATGAAAAGAGGATTCAAAATAGTTATTCCAAAACA
AAATGAGCCGTGGTGTATTCATAATTGTGGTTTTATAGAGATAAAAGATGATTATGAAAAATATAGAAAAATATTTTTAA
ATGAATACCCCTTGAATAAATATTCATCTGTTTATGATTACTTTTACAATGAACGACAAGAAATTATTTCTCTTATTGAG
TCTAAAGCCAGTAGAGTTTTAGATGTAGGTTGTGCTGCTGGTTTATTAGGGAAGAAGCTAAAAACTGAGAGGCCTGGAAC
TATTGTCTATGGTGTAGAAATTAATCGAGATATTGCCCAAGAAGCAGAGCAGTACCTTGATAAGGTATTAGTGGGAGACA
TTTATGAAAAGATAAATGAGCTACCTGACCGTTTTTTCGATACAATTATTCTTGCTGATGTTATCGAACATTTAAATGTG
CCAGAAGTTATTATTAAGAAATTAAAAAGTAAATTGGCTCACAATGGGGAATTTATTATTAGTGTTCCAAATTTTCGTCA
TTGGTCTGTAATTATGAAAATTTTATTTGGCGATTTATCATATGAGGAAGCTGGAATAATGGATAAAACTCACTTACGTA
TTTTTACGAAATATATTATTCATAATATGATGAAAAATCTTAATTTAGAAGTTATTAAAATTAGTAAAAATGTTGTGCCA
CTTGAAGCAAATCAGAAAGAAATTTTAATAAAATTACTAGGAGCGTTTGCATTAGATGTAAGAAGCTTTGCTGCTGATAT
TGATACTTATCAGTATATATATAAGGTAAAACCAAGAGAATATTTACGGTTCTCAAAATTAACTTCAATAATTATCTTAA
CACTTAATAACTATGAAATATCGAAACAATGCATTGAATCGGTATTGAAATTTACGAATTTGCCTTTTGAATTAATTATT
GTGGATAATGGTTCAACGGAAACTCAGTTACTTGAATATTTAAAAAATTTACAGGAAAGGCGAGATGATGTTAAAGTTTA
TTTTCTTCCCGAAAATGTGGGTTATGGGCTTGGTAATAATTTTGGTTTATTACATTCTGTGGGTAAATATGTGGTTTTTT
TGAACAATGATACAATTGTTACACCTGATTGGCTAGAAAAGTTAATTATAGATTTGAATATGGATGAAAAAACCGGATTA
ATTGGGCCGCGAACAAACTATGTTTCGGGAGAACAAATTGTTAATAAAGTAAATTACAAAAATATGAATGAATTATTGGA
ATTTGCCAACAAATGGGAAGCGGTTAATTACCGTGAAGTTACAGAGACAAAAAAACTTGTAGGTTTTTGCCTTCTTGCTA
AAAGAGAAGTGATTGAGAAAATTGGTGGTTTTGATCCTTTATTTGAAATCGGAAACTTTGAGGATGATGATTTATGTAGA
AGAGCCTATCTAGCCGGTTTTAAACTTAAAATTGCTGATGATGTGTTTATTCATCATTATGGGAGTAAAACATTTATTTC
GGAAAAAATTAATTATGATGAAATTATGAAAAAAAATAGAGAAAAATATTTAAAGAAATGGGAAGTGTTTAATGAAATAG
TTAAAACCAATTATTTAAGTATAATTGAAAACTTTTTATTTATAAAGTTAGTGAAGGATAGGGAGGATTTTGGAATACCA
GAAAATAGAGAGGTTTTATTCTTGGCATTAGGAAAAAATGACAATAATTTAGATGAAACATTAATATCTAAATTAATTAA
AAAAATAAATGAAAATGAAATTTTAGTGATTTTAGTAGATGACAATCAAAATCATGAAGAAGTGGAGGAAAAATTAATAA
AAGCTATTACAATGGCTGGGTTTACTCCTGAAGATTGTCCAGACGTATTACTGCATTATAGTAAAAGTTATTTTTATGAT
CTAATAAGTTTAATTAAACTGGCGAAGGCGTGTATTGTTATCGATGAAAGAACTAAAAAATGGGCAGAAGTTTTTGACAA
AGATAAGGTTGATATAGATTAA

Upstream 100 bases:

>100_bases
GTAATAGACTGGTATAAGAAGCATTTTTAGCTGTAAATTATGAATATAGAGCTATAGTTTCATGTAATAGAGGCTTTGTT
AAATAAGGAGTGTAGTTAAG

Downstream 100 bases:

>100_bases
AATTTATAAAACGCTAAAAAATTTGCTTTTGCTTCCGAAATAAAAAATAGAAAGGGTAGGTGGCCACCTGACTTAAAATA
ACTGGCAGGGATGCCAAAGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 833; Mature: 833

Protein sequence:

>833_residues
MNKKICFITCVNNNKLYEECLKYINNLRVPEGYEIEIKIIKNAKSLTSGYNEGMLSSDAKYKVYLHQDTFIINKNFINDI
LKIFDKDKTIGMIGVVGAKTLPINAVWWHSNKKYGKVYENRTGEIELLAFNEVEGDFEEVKVIDGLIMITQYDIPWREDI
FTGWHFYDLSQCMEFMKRGFKIVIPKQNEPWCIHNCGFIEIKDDYEKYRKIFLNEYPLNKYSSVYDYFYNERQEIISLIE
SKASRVLDVGCAAGLLGKKLKTERPGTIVYGVEINRDIAQEAEQYLDKVLVGDIYEKINELPDRFFDTIILADVIEHLNV
PEVIIKKLKSKLAHNGEFIISVPNFRHWSVIMKILFGDLSYEEAGIMDKTHLRIFTKYIIHNMMKNLNLEVIKISKNVVP
LEANQKEILIKLLGAFALDVRSFAADIDTYQYIYKVKPREYLRFSKLTSIIILTLNNYEISKQCIESVLKFTNLPFELII
VDNGSTETQLLEYLKNLQERRDDVKVYFLPENVGYGLGNNFGLLHSVGKYVVFLNNDTIVTPDWLEKLIIDLNMDEKTGL
IGPRTNYVSGEQIVNKVNYKNMNELLEFANKWEAVNYREVTETKKLVGFCLLAKREVIEKIGGFDPLFEIGNFEDDDLCR
RAYLAGFKLKIADDVFIHHYGSKTFISEKINYDEIMKKNREKYLKKWEVFNEIVKTNYLSIIENFLFIKLVKDREDFGIP
ENREVLFLALGKNDNNLDETLISKLIKKINENEILVILVDDNQNHEEVEEKLIKAITMAGFTPEDCPDVLLHYSKSYFYD
LISLIKLAKACIVIDERTKKWAEVFDKDKVDID

Sequences:

>Translated_833_residues
MNKKICFITCVNNNKLYEECLKYINNLRVPEGYEIEIKIIKNAKSLTSGYNEGMLSSDAKYKVYLHQDTFIINKNFINDI
LKIFDKDKTIGMIGVVGAKTLPINAVWWHSNKKYGKVYENRTGEIELLAFNEVEGDFEEVKVIDGLIMITQYDIPWREDI
FTGWHFYDLSQCMEFMKRGFKIVIPKQNEPWCIHNCGFIEIKDDYEKYRKIFLNEYPLNKYSSVYDYFYNERQEIISLIE
SKASRVLDVGCAAGLLGKKLKTERPGTIVYGVEINRDIAQEAEQYLDKVLVGDIYEKINELPDRFFDTIILADVIEHLNV
PEVIIKKLKSKLAHNGEFIISVPNFRHWSVIMKILFGDLSYEEAGIMDKTHLRIFTKYIIHNMMKNLNLEVIKISKNVVP
LEANQKEILIKLLGAFALDVRSFAADIDTYQYIYKVKPREYLRFSKLTSIIILTLNNYEISKQCIESVLKFTNLPFELII
VDNGSTETQLLEYLKNLQERRDDVKVYFLPENVGYGLGNNFGLLHSVGKYVVFLNNDTIVTPDWLEKLIIDLNMDEKTGL
IGPRTNYVSGEQIVNKVNYKNMNELLEFANKWEAVNYREVTETKKLVGFCLLAKREVIEKIGGFDPLFEIGNFEDDDLCR
RAYLAGFKLKIADDVFIHHYGSKTFISEKINYDEIMKKNREKYLKKWEVFNEIVKTNYLSIIENFLFIKLVKDREDFGIP
ENREVLFLALGKNDNNLDETLISKLIKKINENEILVILVDDNQNHEEVEEKLIKAITMAGFTPEDCPDVLLHYSKSYFYD
LISLIKLAKACIVIDERTKKWAEVFDKDKVDID
>Mature_833_residues
MNKKICFITCVNNNKLYEECLKYINNLRVPEGYEIEIKIIKNAKSLTSGYNEGMLSSDAKYKVYLHQDTFIINKNFINDI
LKIFDKDKTIGMIGVVGAKTLPINAVWWHSNKKYGKVYENRTGEIELLAFNEVEGDFEEVKVIDGLIMITQYDIPWREDI
FTGWHFYDLSQCMEFMKRGFKIVIPKQNEPWCIHNCGFIEIKDDYEKYRKIFLNEYPLNKYSSVYDYFYNERQEIISLIE
SKASRVLDVGCAAGLLGKKLKTERPGTIVYGVEINRDIAQEAEQYLDKVLVGDIYEKINELPDRFFDTIILADVIEHLNV
PEVIIKKLKSKLAHNGEFIISVPNFRHWSVIMKILFGDLSYEEAGIMDKTHLRIFTKYIIHNMMKNLNLEVIKISKNVVP
LEANQKEILIKLLGAFALDVRSFAADIDTYQYIYKVKPREYLRFSKLTSIIILTLNNYEISKQCIESVLKFTNLPFELII
VDNGSTETQLLEYLKNLQERRDDVKVYFLPENVGYGLGNNFGLLHSVGKYVVFLNNDTIVTPDWLEKLIIDLNMDEKTGL
IGPRTNYVSGEQIVNKVNYKNMNELLEFANKWEAVNYREVTETKKLVGFCLLAKREVIEKIGGFDPLFEIGNFEDDDLCR
RAYLAGFKLKIADDVFIHHYGSKTFISEKINYDEIMKKNREKYLKKWEVFNEIVKTNYLSIIENFLFIKLVKDREDFGIP
ENREVLFLALGKNDNNLDETLISKLIKKINENEILVILVDDNQNHEEVEEKLIKAITMAGFTPEDCPDVLLHYSKSYFYD
LISLIKLAKACIVIDERTKKWAEVFDKDKVDID

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 97154; Mature: 97154

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKICFITCVNNNKLYEECLKYINNLRVPEGYEIEIKIIKNAKSLTSGYNEGMLSSDAK
CCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCE
YKVYLHQDTFIINKNFINDILKIFDKDKTIGMIGVVGAKTLPINAVWWHSNKKYGKVYEN
EEEEEECCEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHCC
RTGEIELLAFNEVEGDFEEVKVIDGLIMITQYDIPWREDIFTGWHFYDLSQCMEFMKRGF
CCCCEEEEEEECCCCCHHHHHHHCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCC
KIVIPKQNEPWCIHNCGFIEIKDDYEKYRKIFLNEYPLNKYSSVYDYFYNERQEIISLIE
EEEEECCCCCEEEECCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKASRVLDVGCAAGLLGKKLKTERPGTIVYGVEINRDIAQEAEQYLDKVLVGDIYEKINE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
LPDRFFDTIILADVIEHLNVPEVIIKKLKSKLAHNGEFIISVPNFRHWSVIMKILFGDLS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCC
YEEAGIMDKTHLRIFTKYIIHNMMKNLNLEVIKISKNVVPLEANQKEILIKLLGAFALDV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHH
RSFAADIDTYQYIYKVKPREYLRFSKLTSIIILTLNNYEISKQCIESVLKFTNLPFELII
HHHHHHHHHEEHHEEECHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEE
VDNGSTETQLLEYLKNLQERRDDVKVYFLPENVGYGLGNNFGLLHSVGKYVVFLNNDTIV
EECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCEEE
TPDWLEKLIIDLNMDEKTGLIGPRTNYVSGEQIVNKVNYKNMNELLEFANKWEAVNYREV
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH
TETKKLVGFCLLAKREVIEKIGGFDPLFEIGNFEDDDLCRRAYLAGFKLKIADDVFIHHY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCEEEEECEEEEEEC
GSKTFISEKINYDEIMKKNREKYLKKWEVFNEIVKTNYLSIIENFLFIKLVKDREDFGIP
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHCCCC
ENREVLFLALGKNDNNLDETLISKLIKKINENEILVILVDDNQNHEEVEEKLIKAITMAG
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
FTPEDCPDVLLHYSKSYFYDLISLIKLAKACIVIDERTKKWAEVFDKDKVDID
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNKKICFITCVNNNKLYEECLKYINNLRVPEGYEIEIKIIKNAKSLTSGYNEGMLSSDAK
CCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCE
YKVYLHQDTFIINKNFINDILKIFDKDKTIGMIGVVGAKTLPINAVWWHSNKKYGKVYEN
EEEEEECCEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHCC
RTGEIELLAFNEVEGDFEEVKVIDGLIMITQYDIPWREDIFTGWHFYDLSQCMEFMKRGF
CCCCEEEEEEECCCCCHHHHHHHCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCC
KIVIPKQNEPWCIHNCGFIEIKDDYEKYRKIFLNEYPLNKYSSVYDYFYNERQEIISLIE
EEEEECCCCCEEEECCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKASRVLDVGCAAGLLGKKLKTERPGTIVYGVEINRDIAQEAEQYLDKVLVGDIYEKINE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
LPDRFFDTIILADVIEHLNVPEVIIKKLKSKLAHNGEFIISVPNFRHWSVIMKILFGDLS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCC
YEEAGIMDKTHLRIFTKYIIHNMMKNLNLEVIKISKNVVPLEANQKEILIKLLGAFALDV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHH
RSFAADIDTYQYIYKVKPREYLRFSKLTSIIILTLNNYEISKQCIESVLKFTNLPFELII
HHHHHHHHHEEHHEEECHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEE
VDNGSTETQLLEYLKNLQERRDDVKVYFLPENVGYGLGNNFGLLHSVGKYVVFLNNDTIV
EECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCEEE
TPDWLEKLIIDLNMDEKTGLIGPRTNYVSGEQIVNKVNYKNMNELLEFANKWEAVNYREV
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH
TETKKLVGFCLLAKREVIEKIGGFDPLFEIGNFEDDDLCRRAYLAGFKLKIADDVFIHHY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCEEEEECEEEEEEC
GSKTFISEKINYDEIMKKNREKYLKKWEVFNEIVKTNYLSIIENFLFIKLVKDREDFGIP
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHCCCC
ENREVLFLALGKNDNNLDETLISKLIKKINENEILVILVDDNQNHEEVEEKLIKAITMAG
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
FTPEDCPDVLLHYSKSYFYDLISLIKLAKACIVIDERTKKWAEVFDKDKVDID
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]