Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is recX [H]
Identifier: 78043416
GI number: 78043416
Start: 1040747
End: 1041190
Strand: Direct
Name: recX [H]
Synonym: CHY_1167
Alternate gene names: 78043416
Gene position: 1040747-1041190 (Clockwise)
Preceding gene: 78044103
Following gene: 78042872
Centisome position: 43.34
GC content: 40.09
Gene sequence:
>444_bases TTGAGTAGTCGGGCTTACCAAAAAGCCTTAAACTACCTTTCCCGTGCCCTGCGGACAACTGCAGAAGTGCGCCAGTATCT TTCAAAAAATGGTTTTTCCGATGAAGAAATTGAAGAGGCGATTTCCAGGCTTACTGCTATCGGTTATTTAGATGACAAAC GGTACGTGGAAAATTATCTTTTAAGTGGAAAGGCTTTAAGATACGGAATATACCGAATAAAATCTAAGCTTTTGCAAAAA GGAATAGATTTGGAACTTTTAAATAATTTGCCGGTGGACGAAGAGGAGGAAGTTATTAAAGCAAAGGAGATTTTATTAAA GAAGTATAAACAGCTTGACCCAGAGGATTATGGCAAATATTACCGATTTTTGGTGGGACGTGGTTTTTCGCCGGCGGTGG CGCGAAAAGCAGTTTTCTTGACAGATGATAAGGAGAACGGGTAA
Upstream 100 bases:
>100_bases CGGAAATTTACAGAGAAATTGAGCAAAAGATCCGGGAGCAAGTATTGAACTCTCCAGAATCGTCGAGTTTTAAAAATTCC GAGGAGTTTGAGGAATAATT
Downstream 100 bases:
>100_bases AATATGGATAGGTGAAAGTAGAATGGGACCTGCCGATTGGTTTTGGCCTGTTGGTAGGTTTCTTATTCTATTTCAGCCGA GTAGAAACTCGGTTTTTTTT
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSSRAYQKALNYLSRALRTTAEVRQYLSKNGFSDEEIEEAISRLTAIGYLDDKRYVENYLLSGKALRYGIYRIKSKLLQK GIDLELLNNLPVDEEEEVIKAKEILLKKYKQLDPEDYGKYYRFLVGRGFSPAVARKAVFLTDDKENG
Sequences:
>Translated_147_residues MSSRAYQKALNYLSRALRTTAEVRQYLSKNGFSDEEIEEAISRLTAIGYLDDKRYVENYLLSGKALRYGIYRIKSKLLQK GIDLELLNNLPVDEEEEVIKAKEILLKKYKQLDPEDYGKYYRFLVGRGFSPAVARKAVFLTDDKENG >Mature_146_residues SSRAYQKALNYLSRALRTTAEVRQYLSKNGFSDEEIEEAISRLTAIGYLDDKRYVENYLLSGKALRYGIYRIKSKLLQKG IDLELLNNLPVDEEEEVIKAKEILLKKYKQLDPEDYGKYYRFLVGRGFSPAVARKAVFLTDDKENG
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 17015; Mature: 16883
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRAYQKALNYLSRALRTTAEVRQYLSKNGFSDEEIEEAISRLTAIGYLDDKRYVENYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH LSGKALRYGIYRIKSKLLQKGIDLELLNNLPVDEEEEVIKAKEILLKKYKQLDPEDYGKY HCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH YRFLVGRGFSPAVARKAVFLTDDKENG HHHHHCCCCCHHHHHHHHEECCCCCCC >Mature Secondary Structure SSRAYQKALNYLSRALRTTAEVRQYLSKNGFSDEEIEEAISRLTAIGYLDDKRYVENYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH LSGKALRYGIYRIKSKLLQKGIDLELLNNLPVDEEEEVIKAKEILLKKYKQLDPEDYGKY HCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH YRFLVGRGFSPAVARKAVFLTDDKENG HHHHHCCCCCHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA