Click here to switch to the map view.

The map label for this gene is 78042908

Identifier: 78042908

GI number: 78042908

Start: 875140

End: 875481

Strand: Direct

Name: 78042908

Synonym: CHY_0988

Alternate gene names: NA

Gene position: 875140-875481 (Clockwise)

Preceding gene: 78044801

Following gene: 78044102

Centisome position: 36.44

GC content: 44.74

Gene sequence:

>342_bases
GTGATCATACCCAATATAGACCCATTGCTTTTACAAAAATACCGGGAGCAGGTAAAGCCGAAAGTACCGGAGATAAAAAA
GACTGCCGATGAAGTGCGGTATGAGCCGGAGTATGACGGGGAAAAGGAGTTTATCCCGAAGCTGGCGGCGGATGTGTTTC
ACCGGGTGATTAACTTTTTAAACCCGGCACTGGAATTTGTTTATGATGAGCAGGAAGAAATGGGGTATGTCATTGATAAG
GTGAAAAACCGGGTATTAAAACGAGTTAGCTTAGAGCATTTAAAAACGGCGTTTACCGACCTTACCAAAACCATAGGACT
TTTGCTGGACGAGAGGGTGTAG

Upstream 100 bases:

>100_bases
AAAAAAAGATGATTAATTCCTATTTAGCAAATGGCTTTCAAGTGGAAGGTATTTTCTTAGATAAAAAACGTTAATTTCCC
CACAAAGGGGGGATAAAAGG

Downstream 100 bases:

>100_bases
GCCCTCTTTTTTTTGTTTTCGTTTTATATTGACAATTTTCGTTATTTTTTATAAGTTAATTTTTGTGAAAGATTTCCTCG
AAAAGTTTGGCAAAACCGGC

Product: flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MIIPNIDPLLLQKYREQVKPKVPEIKKTADEVRYEPEYDGEKEFIPKLAADVFHRVINFLNPALEFVYDEQEEMGYVIDK
VKNRVLKRVSLEHLKTAFTDLTKTIGLLLDERV

Sequences:

>Translated_113_residues
MIIPNIDPLLLQKYREQVKPKVPEIKKTADEVRYEPEYDGEKEFIPKLAADVFHRVINFLNPALEFVYDEQEEMGYVIDK
VKNRVLKRVSLEHLKTAFTDLTKTIGLLLDERV
>Mature_113_residues
MIIPNIDPLLLQKYREQVKPKVPEIKKTADEVRYEPEYDGEKEFIPKLAADVFHRVINFLNPALEFVYDEQEEMGYVIDK
VKNRVLKRVSLEHLKTAFTDLTKTIGLLLDERV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13288; Mature: 13288

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPNIDPLLLQKYREQVKPKVPEIKKTADEVRYEPEYDGEKEFIPKLAADVFHRVINFL
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NPALEFVYDEQEEMGYVIDKVKNRVLKRVSLEHLKTAFTDLTKTIGLLLDERV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIPNIDPLLLQKYREQVKPKVPEIKKTADEVRYEPEYDGEKEFIPKLAADVFHRVINFL
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NPALEFVYDEQEEMGYVIDKVKNRVLKRVSLEHLKTAFTDLTKTIGLLLDERV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA