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The map label for this gene is 78042872

Identifier: 78042872

GI number: 78042872

Start: 1041322

End: 1042863

Strand: Direct

Name: 78042872

Synonym: CHY_1168

Alternate gene names: NA

Gene position: 1041322-1042863 (Clockwise)

Preceding gene: 78043416

Following gene: 78044863

Centisome position: 43.36

GC content: 43.84

Gene sequence:

>1542_bases
TTGAATTTAATAACCGACATAATTATTGCTGTTGCTGGAGTTGGGGTTGGGGTTGCTGCAGGTTATGTTATCAGAAAAAA
CATTGCTGAGGCAGCCATCGGTTCCGCAGAAGCTCAGGCTAAAAAAATAATTGACGAAGCAACAAAAGCCGCTGAAGCCA
AGAAAAGAGAAGCGGTTTTAGAAGCAAAAGAAGAAATTTTAAAAATGAAAAATGAAGTAGAAAGAGAACACCGGGAAAGA
CGCCAGGAATTGCAACGTTTAGAGCGCAGGCTTCTTTCCAAGGAAGAAACCTTGGATCGGAAAATAGAAAGTTTTGAGAG
AAAAGAAGAGCAGTTAGCCAAAAAGGAGCAGGAAATAGAGAATTTGCGGCAAAGCTTAGAGGAGACGCTGCAAAAAGAAT
TGGCTGAGTTAGAACGGATTTCGGGACTTTCTACCGAGGAGGCAAGGGAGCTCCTTCTAAAACAAGTGGAAGAAGAAGTT
CAACAAGAAATGGCCTTATTAATCAAGGAAATTGAAACAAAGGCCAAAGAAGAGGCCGAAAAAAGAGCCAGGGAAATTAT
TACATTAGCAATTCAAAGATGTGCTGCTGATCATGCGGCCGAAACCACAGTTACGGTTGTTGCCCTCCCCAATGATGAGA
TGAAAGGAAGAATAATAGGGCGTGAAGGTCGGAACATAAGGACTTTTGAATCTTTAACGGGTGTTGATTTAATTATTGAT
GATACCCCCGAGGCTGTTATTCTTTCCGGGTTTGATCCAATCCGCCGGGAAATCGCCCGACGAGCCCTGGAAAAGTTAAT
CCAGGATGGGAGAATTCACCCGGCGCGTATTGAGGAAATGGTGGAAAGGGCTACCAAAGAAGTAGAGCAAGATATAAGGG
AAGCTGGTGAACAAGCAGCTTTTGAGGTTAACGTTCACGGTTTACATCCCGAGATTATTAAACTACTTGGTAGGTTAAAA
TTTAGAACAAGTTACGGACAAAATATTTTAAAGCATTCTATTGAGGTTGCCCACTTAGCCGGCTTAATGGCTGCTGAGTT
GGGAGCTGATGTTGCTTTAGCAAAACGGGCTGGGCTTTTGCACGATATCGGGAAAGCCGTTGACCATGAAGTGGAAGGAT
CCCATGTGGAAATTGGGGTTGAGCTTGCTAAAAAATACCGCGAGCATCCGGAAGTTTTACATGCAATTGCCACCCATCAT
GGTGATGAAGAGCCAAAAACAGTGGAAGCAGTACTTGTGCAAGCTGCCGATGCCATTTCTGCCGCAAGACCCGGAGCAAG
GCGTGAAACTTTGGAAGCCTATCTTAAACGGCTCGAAAAATTAGAAGGAATTGCTAATGAGTTTGAAGGTGTGGAGAAAT
CTTATGCTATCCAGGCTGGCCGGGAACTAAGAATCCTGGTAAAACCTGAAAAGATAGATGACCTGGCTTCCGTTCGTTTA
GCTCGGGAGATTGCTAAGAAAATTGAAGAAGAGGTGGAATATCCCGGGCAAATAAAAGTTACCGTTATACGGGAAACCAG
GGCAGTCGATTACGCAAAATAG

Upstream 100 bases:

>100_bases
GCCGATTGGTTTTGGCCTGTTGGTAGGTTTCTTATTCTATTTCAGCCGAGTAGAAACTCGGTTTTTTTTATTAGCTACCC
GATAGTAAGGAGGTGAAAAA

Downstream 100 bases:

>100_bases
GCAAAAAAACGACCCGCAGGGGTCGTTTTTAATTATAGAAGGAAAAAATGGTTTTGTGGTAGAATTAATTTATGGTGGGT
GAGATAGCAATGAAAAATCC

Product: HDIG/KH domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MNLITDIIIAVAGVGVGVAAGYVIRKNIAEAAIGSAEAQAKKIIDEATKAAEAKKREAVLEAKEEILKMKNEVEREHRER
RQELQRLERRLLSKEETLDRKIESFERKEEQLAKKEQEIENLRQSLEETLQKELAELERISGLSTEEARELLLKQVEEEV
QQEMALLIKEIETKAKEEAEKRAREIITLAIQRCAADHAAETTVTVVALPNDEMKGRIIGREGRNIRTFESLTGVDLIID
DTPEAVILSGFDPIRREIARRALEKLIQDGRIHPARIEEMVERATKEVEQDIREAGEQAAFEVNVHGLHPEIIKLLGRLK
FRTSYGQNILKHSIEVAHLAGLMAAELGADVALAKRAGLLHDIGKAVDHEVEGSHVEIGVELAKKYREHPEVLHAIATHH
GDEEPKTVEAVLVQAADAISAARPGARRETLEAYLKRLEKLEGIANEFEGVEKSYAIQAGRELRILVKPEKIDDLASVRL
AREIAKKIEEEVEYPGQIKVTVIRETRAVDYAK

Sequences:

>Translated_513_residues
MNLITDIIIAVAGVGVGVAAGYVIRKNIAEAAIGSAEAQAKKIIDEATKAAEAKKREAVLEAKEEILKMKNEVEREHRER
RQELQRLERRLLSKEETLDRKIESFERKEEQLAKKEQEIENLRQSLEETLQKELAELERISGLSTEEARELLLKQVEEEV
QQEMALLIKEIETKAKEEAEKRAREIITLAIQRCAADHAAETTVTVVALPNDEMKGRIIGREGRNIRTFESLTGVDLIID
DTPEAVILSGFDPIRREIARRALEKLIQDGRIHPARIEEMVERATKEVEQDIREAGEQAAFEVNVHGLHPEIIKLLGRLK
FRTSYGQNILKHSIEVAHLAGLMAAELGADVALAKRAGLLHDIGKAVDHEVEGSHVEIGVELAKKYREHPEVLHAIATHH
GDEEPKTVEAVLVQAADAISAARPGARRETLEAYLKRLEKLEGIANEFEGVEKSYAIQAGRELRILVKPEKIDDLASVRL
AREIAKKIEEEVEYPGQIKVTVIRETRAVDYAK
>Mature_513_residues
MNLITDIIIAVAGVGVGVAAGYVIRKNIAEAAIGSAEAQAKKIIDEATKAAEAKKREAVLEAKEEILKMKNEVEREHRER
RQELQRLERRLLSKEETLDRKIESFERKEEQLAKKEQEIENLRQSLEETLQKELAELERISGLSTEEARELLLKQVEEEV
QQEMALLIKEIETKAKEEAEKRAREIITLAIQRCAADHAAETTVTVVALPNDEMKGRIIGREGRNIRTFESLTGVDLIID
DTPEAVILSGFDPIRREIARRALEKLIQDGRIHPARIEEMVERATKEVEQDIREAGEQAAFEVNVHGLHPEIIKLLGRLK
FRTSYGQNILKHSIEVAHLAGLMAAELGADVALAKRAGLLHDIGKAVDHEVEGSHVEIGVELAKKYREHPEVLHAIATHH
GDEEPKTVEAVLVQAADAISAARPGARRETLEAYLKRLEKLEGIANEFEGVEKSYAIQAGRELRILVKPEKIDDLASVRL
AREIAKKIEEEVEYPGQIKVTVIRETRAVDYAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_CARHZ (Q3ACX1)

Other databases:

- EMBL:   CP000141
- RefSeq:   YP_360013.1
- ProteinModelPortal:   Q3ACX1
- STRING:   Q3ACX1
- GeneID:   3727048
- GenomeReviews:   CP000141_GR
- KEGG:   chy:CHY_1168
- NMPDR:   fig|246194.3.peg.1219
- TIGR:   CHY_1168
- eggNOG:   COG1418
- HOGENOM:   HBG734610
- OMA:   HPGRIEE
- BioCyc:   CHYD246194:CHY_1168-MONOMER
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 57584; Mature: 57584

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf9b5ae4)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLITDIIIAVAGVGVGVAAGYVIRKNIAEAAIGSAEAQAKKIIDEATKAAEAKKREAVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAKEEILKMKNEVEREHRERRQELQRLERRLLSKEETLDRKIESFERKEEQLAKKEQEIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLRQSLEETLQKELAELERISGLSTEEARELLLKQVEEEVQQEMALLIKEIETKAKEEAE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRAREIITLAIQRCAADHAAETTVTVVALPNDEMKGRIIGREGRNIRTFESLTGVDLIID
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHHHCCCEEEEC
DTPEAVILSGFDPIRREIARRALEKLIQDGRIHPARIEEMVERATKEVEQDIREAGEQAA
CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCE
FEVNVHGLHPEIIKLLGRLKFRTSYGQNILKHSIEVAHLAGLMAAELGADVALAKRAGLL
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HDIGKAVDHEVEGSHVEIGVELAKKYREHPEVLHAIATHHGDEEPKTVEAVLVQAADAIS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AARPGARRETLEAYLKRLEKLEGIANEFEGVEKSYAIQAGRELRILVKPEKIDDLASVRL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
AREIAKKIEEEVEYPGQIKVTVIRETRAVDYAK
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
>Mature Secondary Structure
MNLITDIIIAVAGVGVGVAAGYVIRKNIAEAAIGSAEAQAKKIIDEATKAAEAKKREAVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAKEEILKMKNEVEREHRERRQELQRLERRLLSKEETLDRKIESFERKEEQLAKKEQEIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLRQSLEETLQKELAELERISGLSTEEARELLLKQVEEEVQQEMALLIKEIETKAKEEAE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRAREIITLAIQRCAADHAAETTVTVVALPNDEMKGRIIGREGRNIRTFESLTGVDLIID
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHHHCCCEEEEC
DTPEAVILSGFDPIRREIARRALEKLIQDGRIHPARIEEMVERATKEVEQDIREAGEQAA
CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCE
FEVNVHGLHPEIIKLLGRLKFRTSYGQNILKHSIEVAHLAGLMAAELGADVALAKRAGLL
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HDIGKAVDHEVEGSHVEIGVELAKKYREHPEVLHAIATHHGDEEPKTVEAVLVQAADAIS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AARPGARRETLEAYLKRLEKLEGIANEFEGVEKSYAIQAGRELRILVKPEKIDDLASVRL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
AREIAKKIEEEVEYPGQIKVTVIRETRAVDYAK
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA