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The map label for this gene is dppC [H]

Identifier: 77465522

GI number: 77465522

Start: 601149

End: 602027

Strand: Reverse

Name: dppC [H]

Synonym: RSP_3522

Alternate gene names: 77465522

Gene position: 602027-601149 (Counterclockwise)

Preceding gene: 77465523

Following gene: 77465521

Centisome position: 63.84

GC content: 66.21

Gene sequence:

>879_bases
ATGGACCAGAGCATCGACGCCCGCCCCGCCACGCCGTCGCGCCTGACCCGCGCCCGCAGGCTTCTCACCACCGCGCCCTT
CACCGCACGGCTGGGAATGGTCCTCGTCGCGATCTACGCCTTCGTCGCGATCTTTGCGCCCTGGATCGCGCCCTACGGCG
AGGTCGAGGTGGTCTCGCGCATCCCCTTCGACGGCTGGAGCGCCCAGCATCTGCTGGGCACCGATCAGCTCGGGCGGGAT
TTCCTGTCGCGGCTGATCTTCGGGGCGCGGAACTCGATCTCCATCGCGCTCGTGACCACGATGATCTCCTTCGGGCTGGG
CTGCCTCCTCGGCGTCTTCTCGGCGCTGATCGGCGGCTTCGTCGATCAGGCGATCTCGCGCTTCGTGGATGCGCTGATGT
CGGTGCCGGATCTGATCTTCATCCTGATGATCCTGTCGATCTTCGGCAATTCGATCCCGAACCTCATCCTCATCATCGCC
GTGCTGACCTCGACCCGCTTCTTCCGCATCTCGCGCGCCGCGGCGCTGAACGTGGCCAGCCTCGATTTCGTCGAGGCCGC
CCGGGTGCGCGGCGAGAGCCTGCTCTGGATCTCGGTCCACGAGGTGTTCCCGAACGTGCTGCCGCTGATCCTGTCCGAGC
TCGGCATGCGCTTCTGCTTCATCTTCCTCTCCATTGCGGCGCTCTCCTTCCTCGGCGTAGGCATCCAGCCACCGCTGGCG
GAGTGGGGCTCGATGGTCCGGGACAATGCGGCCCTCATCAACATGGGCGATATCACGCCCCTGATCCCGGCCGCCTCCAT
CGCGCTGCTCGCCATCGCGGTCAATTTCGTGGTCGACTGGCTGCTGAACCGGGCCAGCGGCCTGAACGAGGAGGGCTGA

Upstream 100 bases:

>100_bases
CTGATCTTCGCCACGGCCTACATCGGCTTCAACCTGCTGGCCGATATCGTCTCGATCGTCAGCAACCCGCGCCTGCTGCA
TCCGCGCTGAGAGGGGTATC

Downstream 100 bases:

>100_bases
GCCATGGCCGTCGAACCGTCCCCCGCCGTGCTCGAGATCCGCGACCTGAGGATCGAGGCGAAATCCTCCGACAGCTGGTC
CGAGATCGTCCGGGGGGTGA

Product: ABC peptide transporter, inner membrane subunit

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDQSIDARPATPSRLTRARRLLTTAPFTARLGMVLVAIYAFVAIFAPWIAPYGEVEVVSRIPFDGWSAQHLLGTDQLGRD
FLSRLIFGARNSISIALVTTMISFGLGCLLGVFSALIGGFVDQAISRFVDALMSVPDLIFILMILSIFGNSIPNLILIIA
VLTSTRFFRISRAAALNVASLDFVEAARVRGESLLWISVHEVFPNVLPLILSELGMRFCFIFLSIAALSFLGVGIQPPLA
EWGSMVRDNAALINMGDITPLIPAASIALLAIAVNFVVDWLLNRASGLNEEG

Sequences:

>Translated_292_residues
MDQSIDARPATPSRLTRARRLLTTAPFTARLGMVLVAIYAFVAIFAPWIAPYGEVEVVSRIPFDGWSAQHLLGTDQLGRD
FLSRLIFGARNSISIALVTTMISFGLGCLLGVFSALIGGFVDQAISRFVDALMSVPDLIFILMILSIFGNSIPNLILIIA
VLTSTRFFRISRAAALNVASLDFVEAARVRGESLLWISVHEVFPNVLPLILSELGMRFCFIFLSIAALSFLGVGIQPPLA
EWGSMVRDNAALINMGDITPLIPAASIALLAIAVNFVVDWLLNRASGLNEEG
>Mature_292_residues
MDQSIDARPATPSRLTRARRLLTTAPFTARLGMVLVAIYAFVAIFAPWIAPYGEVEVVSRIPFDGWSAQHLLGTDQLGRD
FLSRLIFGARNSISIALVTTMISFGLGCLLGVFSALIGGFVDQAISRFVDALMSVPDLIFILMILSIFGNSIPNLILIIA
VLTSTRFFRISRAAALNVASLDFVEAARVRGESLLWISVHEVFPNVLPLILSELGMRFCFIFLSIAALSFLGVGIQPPLA
EWGSMVRDNAALINMGDITPLIPAASIALLAIAVNFVVDWLLNRASGLNEEG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=247, Percent_Identity=36.8421052631579, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787054, Length=242, Percent_Identity=33.0578512396694, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1787760, Length=284, Percent_Identity=30.2816901408451, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1787549, Length=280, Percent_Identity=30.3571428571429, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789889, Length=238, Percent_Identity=31.0924369747899, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=30.7407407407407, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788505, Length=178, Percent_Identity=29.7752808988764, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31623; Mature: 31623

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSIDARPATPSRLTRARRLLTTAPFTARLGMVLVAIYAFVAIFAPWIAPYGEVEVVSR
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IPFDGWSAQHLLGTDQLGRDFLSRLIFGARNSISIALVTTMISFGLGCLLGVFSALIGGF
CCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDQAISRFVDALMSVPDLIFILMILSIFGNSIPNLILIIAVLTSTRFFRISRAAALNVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDFVEAARVRGESLLWISVHEVFPNVLPLILSELGMRFCFIFLSIAALSFLGVGIQPPLA
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EWGSMVRDNAALINMGDITPLIPAASIALLAIAVNFVVDWLLNRASGLNEEG
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDQSIDARPATPSRLTRARRLLTTAPFTARLGMVLVAIYAFVAIFAPWIAPYGEVEVVSR
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IPFDGWSAQHLLGTDQLGRDFLSRLIFGARNSISIALVTTMISFGLGCLLGVFSALIGGF
CCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDQAISRFVDALMSVPDLIFILMILSIFGNSIPNLILIIAVLTSTRFFRISRAAALNVAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDFVEAARVRGESLLWISVHEVFPNVLPLILSELGMRFCFIFLSIAALSFLGVGIQPPLA
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EWGSMVRDNAALINMGDITPLIPAASIALLAIAVNFVVDWLLNRASGLNEEG
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]