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The map label for this gene is yidL [C]

Identifier: 77465420

GI number: 77465420

Start: 486040

End: 486333

Strand: Reverse

Name: yidL [C]

Synonym: RSP_3418

Alternate gene names: 77465420

Gene position: 486333-486040 (Counterclockwise)

Preceding gene: 77465425

Following gene: 77465418

Centisome position: 51.57

GC content: 72.79

Gene sequence:

>294_bases
GTGGCCGAGATGGCGCAGGTGGTGGGCCTGTCCGAGAGCTGGTTCACCCGGCTCTTCCGGGACACGACCGGGGTCACGCC
GCTGCAATGGCAGCTACGCCAGAGGGTCGAGCTGGCGCAGACCCTTCTCGAGGAGAACCTCAGCGTGGCCGAGATCGCCG
ACCGCTTGGGCTTCAGCGATCAGGCGCATCTGACGCGCGTCTTCCGTCAGGTGACAGGCCAGCCGCCGGGCGCCTGGCGC
CGCGCCCGGCTCTGCGCGGCGCCGCCCGAAAGCGGGGCGGCGCGCCGGGCCTGA

Upstream 100 bases:

>100_bases
TCGCGTCGGGAGAGGAGGCCATGAGCCGCACGCGGCTGACGCAGGGCCAGATCCGCAAGCTCGAGCGCGCCTTCCGGGCG
GGGGCGGGCGCGGCCAGTCG

Downstream 100 bases:

>100_bases
GGCGGGAGCGCCGCCCCGGGTCCGAGGCCGTCCGCGCAGCAGCCACCAAGGCGGCGGCCCGGTCTGATGCGGGACCGTCG
CCACAGGTCCGAGGAGGGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; AraC Family Transcription Regulator; AraC-Family Transcriptional Regulator; Transcriptional Regulator Protein; AraC Family Transcription Regulator Protein; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; AraC-Family Regulatory Protein; Transcription Regulator AraC Family; AraC/XylS Family Transcription Factor; Transcription Regulator; Xyls/AraC-Type Transcriptional Activator

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTLLEENLSVAEIADRLGFSDQAHLTRVFRQVTGQPPGAWR
RARLCAAPPESGAARRA

Sequences:

>Translated_97_residues
MAEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTLLEENLSVAEIADRLGFSDQAHLTRVFRQVTGQPPGAWR
RARLCAAPPESGAARRA
>Mature_96_residues
AEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTLLEENLSVAEIADRLGFSDQAHLTRVFRQVTGQPPGAWRR
ARLCAAPPESGAARRA

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510985, Length=79, Percent_Identity=40.5063291139241, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10878; Mature: 10746

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTLLEENLSVAEIADRLGFSD
CCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
QAHLTRVFRQVTGQPPGAWRRARLCAAPPESGAARRA
HHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTLLEENLSVAEIADRLGFSD
CHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
QAHLTRVFRQVTGQPPGAWRRARLCAAPPESGAARRA
HHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA