Click here to switch to the map view.

The map label for this gene is 77465413

Identifier: 77465413

GI number: 77465413

Start: 477576

End: 478016

Strand: Reverse

Name: 77465413

Synonym: RSP_3411

Alternate gene names: NA

Gene position: 478016-477576 (Counterclockwise)

Preceding gene: 77465415

Following gene: 77465412

Centisome position: 50.69

GC content: 67.35

Gene sequence:

>441_bases
ATGGGTGCGAGCAGAAGTGACATCTGGGCCGGTATCGGATTGCTGGCCTTCTGCGGCTTCGTTGCCTGGCGCACCCTTCT
GGTGCGCACCGTGGCCTCGGGCACCATCGCCGGGCCCGTCTTCGTGCCGTGGCTGATGATCGGCGGCCTGTCGCTTCTGG
CGATTGCCCTGATCCTGCGCTCGATCCTGCGCGGCTCATCCGCGGTGGAGCTGCCGACGCGGCGGACGCTGGTGCGGATG
GGGCTGATGGCACTTCTGCTCGTGGCCTATGCCGCGGCCTTCGAGCCGCTGGGATACCTCGTCTCGACGCTCGTGACATT
CGTTCTGGGCCTGCTGCTCTTCAACGAGCGCCGGCCGCTGGTGCTGATCCTCGTTCCGCTGGCCCTGACGGGCGGCGTCT
ACCTCGGCTTCACGCGCCTCTTGCAGGTCTGGCTTCCCTGA

Upstream 100 bases:

>100_bases
AGTGAAACCGATTGGTATATAACAAGTTTACAAAATGCTTGACTCCCCGTGGCTCCCGGGCGAGGGTTCGGCGGGGATGG
AGACTTCGAGGGAGGCGTCC

Downstream 100 bases:

>100_bases
CCGCCTGCGCACGACCTGACCATACGGAGGAGACTATGCAGAAAACCATGATCCTGGGCGCGCTCGCGGCCCTCGCGGCG
ACCCCTGCGCTGGCGGATTA

Product: TRAP-T family transporter small inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGASRSDIWAGIGLLAFCGFVAWRTLLVRTVASGTIAGPVFVPWLMIGGLSLLAIALILRSILRGSSAVELPTRRTLVRM
GLMALLLVAYAAAFEPLGYLVSTLVTFVLGLLLFNERRPLVLILVPLALTGGVYLGFTRLLQVWLP

Sequences:

>Translated_146_residues
MGASRSDIWAGIGLLAFCGFVAWRTLLVRTVASGTIAGPVFVPWLMIGGLSLLAIALILRSILRGSSAVELPTRRTLVRM
GLMALLLVAYAAAFEPLGYLVSTLVTFVLGLLLFNERRPLVLILVPLALTGGVYLGFTRLLQVWLP
>Mature_145_residues
GASRSDIWAGIGLLAFCGFVAWRTLLVRTVASGTIAGPVFVPWLMIGGLSLLAIALILRSILRGSSAVELPTRRTLVRMG
LMALLLVAYAAAFEPLGYLVSTLVTFVLGLLLFNERRPLVLILVPLALTGGVYLGFTRLLQVWLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15708; Mature: 15577

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASRSDIWAGIGLLAFCGFVAWRTLLVRTVASGTIAGPVFVPWLMIGGLSLLAIALILR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SILRGSSAVELPTRRTLVRMGLMALLLVAYAAAFEPLGYLVSTLVTFVLGLLLFNERRPL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VLILVPLALTGGVYLGFTRLLQVWLP
EEEHHHHHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GASRSDIWAGIGLLAFCGFVAWRTLLVRTVASGTIAGPVFVPWLMIGGLSLLAIALILR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SILRGSSAVELPTRRTLVRMGLMALLLVAYAAAFEPLGYLVSTLVTFVLGLLLFNERRPL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VLILVPLALTGGVYLGFTRLLQVWLP
EEEHHHHHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA