| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465411
Identifier: 77465411
GI number: 77465411
Start: 475030
End: 476526
Strand: Reverse
Name: 77465411
Synonym: RSP_3409
Alternate gene names: NA
Gene position: 476526-475030 (Counterclockwise)
Preceding gene: 77465412
Following gene: 77465410
Centisome position: 50.53
GC content: 68.87
Gene sequence:
>1497_bases ATGGAAACCCTCAGCTATCTTCTGCCGCTCTTCGAGCCCGCGACCCTCGGCGCCATCGCGCTCGGCACGCTGGGCGGGCT GATCATCGGCGCTCTCCCCGGGCTGACCGCGACGATGGGGGTGGCGCTGCTCATCCCGCTCACCTTCGGCATGAGCCCCG TCATGGGCCTCAACATGCTGATCGGCATCTATATCGGCGGCATCTACGGCGGCTGCGTCAGCGCGATCCTGCTGCGCACG CCCGGCACGCCCTCGTCGGCGGCGACGGTTCTCGACGGCTATCCGATGGCCCTGCGCGGCGAGGCGGGCAAGGCGCTCGG CCTCGCCACCATCGCCTCGACGCTGGGCGGGCTCTTTGCGGCCGTGGTGCTGGCCACCCTGGCCCCGCAGCTCGCGGGCA TCGCTCTGAAGTTCGGCGCCGCGGAATATTTCGCTCTGGCCTTCTTCGGCCTCACCATCATCGCCTCGCTCTCGGGCGAC ATCCTGAAGGGCGTGATCGCGGGGATGCTCGGCATCCTGATCTCCTGTGTGGGGGCCGATCCGATCACCGGGATGCTGCG CTACACTTTCGGCGTCTCGGGCTTCGCCTCGGGCTTCGCCTTCACCCCGGCCCTCATCGGCCTCTTCGCCCTCTCGGAGG TCTTCACCCAGCTCGAGCGCCTCGGCGCGGGCGACGGGGCGCAGGTGCAGAAGGTGGGCGGGCGTTGGCCGGCCTGGGCC GACCTGCGCGAGAGCCGCGGCGCGCTGGTGCGCGGCTCGATCATCGGGACGCTGATCGGGATCGTTCCCGGCACCGGATC GGGCACGGCCTCGTGGATCGCCTATAACGAGGCGCGCCGCGCCTCGAAGACGCCCGAGAAATTCGGCACCGGCCATGCGC CTGGCATCTGCGCCACCGAGAGCGCCAACAATGCGGTCTGTGCCGCGGCGCTCATCCCGCTTCTGGCCCTCGGCGTGCCG GGCGACGTGGTGACGGCGGTGCTCATGGGCGGGCTGATGATCCAGGGTCTCGCGCCCGGGCCCATGCTCTTCCAGACCAA CCCCGACGTCGTGGTCGGCATCTTCGGCGGCACCTTCCTCGCCACGATCTTCATGTTCCTCTTCGGCATGGCGCTGATCC CGGTCTTCTCGCGGATCCTGATGATCCCGCGCCACATCCTCGCCGTCGCCATCATCGTCTTCTGCTTCATCGGCGCCTAT GCGATCAACCTGAACCCCGTCGATCTCTACACGATGGTGGGCTTCGGCGTGCTCGGCTGGGGGATGCACAAGTTCGGCTT CAGCCAGGCCGCGCTCTGCATCGCGCTGATCCTCGGGCCGATGCTGGAATCGAACCTGCGCCGCGGCCTGCTGCAGGCGG GCGACGATCTCGTGACCTTCCTGTCGGGGCCGATCACCCTGCTTTTCCTCGGGCTGTCGCTCCTGTCGCTTCTCTGGCCG TGGATCGCCGCGCGCCGTGCGGCGGGCAAGCCCTCCTCCCCCCACCAGAACGGATAG
Upstream 100 bases:
>100_bases GACGCTCGACGAGCTCGGCATGACCGGCATGAACAACTGACAGGCCAACGCCGGGCTCCGGTGACAGGACCGGAGCCCGG CCTCGGATCGGGACGCGCCC
Downstream 100 bases:
>100_bases AAGATGACGCGCAACGCCCATGTCGCCCTCGTGACCTGCTTTCACGAGGACGAGACCGTCAACTATGCAGCCACCCGCGC CCAGGTGCGCCGCCAGCTGG
Product: TRAP-T family transporter large inner membrane subunit
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues METLSYLLPLFEPATLGAIALGTLGGLIIGALPGLTATMGVALLIPLTFGMSPVMGLNMLIGIYIGGIYGGCVSAILLRT PGTPSSAATVLDGYPMALRGEAGKALGLATIASTLGGLFAAVVLATLAPQLAGIALKFGAAEYFALAFFGLTIIASLSGD ILKGVIAGMLGILISCVGADPITGMLRYTFGVSGFASGFAFTPALIGLFALSEVFTQLERLGAGDGAQVQKVGGRWPAWA DLRESRGALVRGSIIGTLIGIVPGTGSGTASWIAYNEARRASKTPEKFGTGHAPGICATESANNAVCAAALIPLLALGVP GDVVTAVLMGGLMIQGLAPGPMLFQTNPDVVVGIFGGTFLATIFMFLFGMALIPVFSRILMIPRHILAVAIIVFCFIGAY AINLNPVDLYTMVGFGVLGWGMHKFGFSQAALCIALILGPMLESNLRRGLLQAGDDLVTFLSGPITLLFLGLSLLSLLWP WIAARRAAGKPSSPHQNG
Sequences:
>Translated_498_residues METLSYLLPLFEPATLGAIALGTLGGLIIGALPGLTATMGVALLIPLTFGMSPVMGLNMLIGIYIGGIYGGCVSAILLRT PGTPSSAATVLDGYPMALRGEAGKALGLATIASTLGGLFAAVVLATLAPQLAGIALKFGAAEYFALAFFGLTIIASLSGD ILKGVIAGMLGILISCVGADPITGMLRYTFGVSGFASGFAFTPALIGLFALSEVFTQLERLGAGDGAQVQKVGGRWPAWA DLRESRGALVRGSIIGTLIGIVPGTGSGTASWIAYNEARRASKTPEKFGTGHAPGICATESANNAVCAAALIPLLALGVP GDVVTAVLMGGLMIQGLAPGPMLFQTNPDVVVGIFGGTFLATIFMFLFGMALIPVFSRILMIPRHILAVAIIVFCFIGAY AINLNPVDLYTMVGFGVLGWGMHKFGFSQAALCIALILGPMLESNLRRGLLQAGDDLVTFLSGPITLLFLGLSLLSLLWP WIAARRAAGKPSSPHQNG >Mature_498_residues METLSYLLPLFEPATLGAIALGTLGGLIIGALPGLTATMGVALLIPLTFGMSPVMGLNMLIGIYIGGIYGGCVSAILLRT PGTPSSAATVLDGYPMALRGEAGKALGLATIASTLGGLFAAVVLATLAPQLAGIALKFGAAEYFALAFFGLTIIASLSGD ILKGVIAGMLGILISCVGADPITGMLRYTFGVSGFASGFAFTPALIGLFALSEVFTQLERLGAGDGAQVQKVGGRWPAWA DLRESRGALVRGSIIGTLIGIVPGTGSGTASWIAYNEARRASKTPEKFGTGHAPGICATESANNAVCAAALIPLLALGVP GDVVTAVLMGGLMIQGLAPGPMLFQTNPDVVVGIFGGTFLATIFMFLFGMALIPVFSRILMIPRHILAVAIIVFCFIGAY AINLNPVDLYTMVGFGVLGWGMHKFGFSQAALCIALILGPMLESNLRRGLLQAGDDLVTFLSGPITLLFLGLSLLSLLWP WIAARRAAGKPSSPHQNG
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 51074; Mature: 51074
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLSYLLPLFEPATLGAIALGTLGGLIIGALPGLTATMGVALLIPLTFGMSPVMGLNML CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH IGIYIGGIYGGCVSAILLRTPGTPSSAATVLDGYPMALRGEAGKALGLATIASTLGGLFA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHH AVVLATLAPQLAGIALKFGAAEYFALAFFGLTIIASLSGDILKGVIAGMLGILISCVGAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC PITGMLRYTFGVSGFASGFAFTPALIGLFALSEVFTQLERLGAGDGAQVQKVGGRWPAWA HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHH DLRESRGALVRGSIIGTLIGIVPGTGSGTASWIAYNEARRASKTPEKFGTGHAPGICATE HHHHCCCCEEEHHHHHHHHHHCCCCCCCCCHHEEEHHHHHCCCCCHHCCCCCCCCCEEEC SANNAVCAAALIPLLALGVPGDVVTAVLMGGLMIQGLAPGPMLFQTNPDVVVGIFGGTFL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCHHHH ATIFMFLFGMALIPVFSRILMIPRHILAVAIIVFCFIGAYAINLNPVDLYTMVGFGVLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH GMHKFGFSQAALCIALILGPMLESNLRRGLLQAGDDLVTFLSGPITLLFLGLSLLSLLWP HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH WIAARRAAGKPSSPHQNG HHHHHHCCCCCCCCCCCC >Mature Secondary Structure METLSYLLPLFEPATLGAIALGTLGGLIIGALPGLTATMGVALLIPLTFGMSPVMGLNML CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH IGIYIGGIYGGCVSAILLRTPGTPSSAATVLDGYPMALRGEAGKALGLATIASTLGGLFA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHH AVVLATLAPQLAGIALKFGAAEYFALAFFGLTIIASLSGDILKGVIAGMLGILISCVGAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC PITGMLRYTFGVSGFASGFAFTPALIGLFALSEVFTQLERLGAGDGAQVQKVGGRWPAWA HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHH DLRESRGALVRGSIIGTLIGIVPGTGSGTASWIAYNEARRASKTPEKFGTGHAPGICATE HHHHCCCCEEEHHHHHHHHHHCCCCCCCCCHHEEEHHHHHCCCCCHHCCCCCCCCCEEEC SANNAVCAAALIPLLALGVPGDVVTAVLMGGLMIQGLAPGPMLFQTNPDVVVGIFGGTFL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCHHHH ATIFMFLFGMALIPVFSRILMIPRHILAVAIIVFCFIGAYAINLNPVDLYTMVGFGVLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH GMHKFGFSQAALCIALILGPMLESNLRRGLLQAGDDLVTFLSGPITLLFLGLSLLSLLWP HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH WIAARRAAGKPSSPHQNG HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]