Click here to switch to the map view.

The map label for this gene is yjlB [H]

Identifier: 77465333

GI number: 77465333

Start: 396359

End: 396823

Strand: Reverse

Name: yjlB [H]

Synonym: RSP_3331

Alternate gene names: 77465333

Gene position: 396823-396359 (Counterclockwise)

Preceding gene: 77465334

Following gene: 77465330

Centisome position: 42.08

GC content: 73.55

Gene sequence:

>465_bases
ATGCACCGCGAGACCCTGAAGCTCCTCATGGCGGGGTGGAGCCACCCGACACTGCCGGTGATCCTGCACCGCGGGCTCCT
GCCGCCCGACCCCGACGAGGCCGAGGCGCAGGTCGCCCGTCACGGCTGGCGGGCGCTCTGGCGCGACGGCGTATTCGACT
ACGACCATTTCCACAGCAACGCCTTCGAGGCTCTGGGCGTGCTCTCGGGGCGGGCGCGGCTGCGCCTCGGCGGCCCCGAG
GGCCAGCCGGTCGATGTGACGCCGGGCGACCTCCTGATCCTGCCGCCCGGAACGGGGCACGCGCGGATGGAAGCGTCGGA
GGATTTCCTCCTGTTCGGGGCCTATCCCGCGGGGCAGGAGGAGTGGGACATCTGCCGCGCCCCGGCCGATCCGGTCACGG
CCGAGCGCATCGCCGCCGTGCCGCGCCCTGCGACCGATGCAGCCGGTGCCCCCTGGGAGGAGTGA

Upstream 100 bases:

>100_bases
ACAGCCCTCGTGGCGCCCCTCGTGGCCCACTGGCTGTTCTGATCGGAGCCAGGGCCGCGTCCCGCGCGTTGTCACCCGAC
ACCATCAGAGGGAGACGCCC

Downstream 100 bases:

>100_bases
GCGGATCGGGCGCCGCCGCCGGATGGGTCTGCACGGGTGGCGGACGGGCAGAGGGCGGCAGGCCGCCTCGAGGCGGGCTC
GCCGGGCCCTCCGCGGACCC

Product: cupin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MHRETLKLLMAGWSHPTLPVILHRGLLPPDPDEAEAQVARHGWRALWRDGVFDYDHFHSNAFEALGVLSGRARLRLGGPE
GQPVDVTPGDLLILPPGTGHARMEASEDFLLFGAYPAGQEEWDICRAPADPVTAERIAAVPRPATDAAGAPWEE

Sequences:

>Translated_154_residues
MHRETLKLLMAGWSHPTLPVILHRGLLPPDPDEAEAQVARHGWRALWRDGVFDYDHFHSNAFEALGVLSGRARLRLGGPE
GQPVDVTPGDLLILPPGTGHARMEASEDFLLFGAYPAGQEEWDICRAPADPVTAERIAAVPRPATDAAGAPWEE
>Mature_154_residues
MHRETLKLLMAGWSHPTLPVILHRGLLPPDPDEAEAQVARHGWRALWRDGVFDYDHFHSNAFEALGVLSGRARLRLGGPE
GQPVDVTPGDLLILPPGTGHARMEASEDFLLFGAYPAGQEEWDICRAPADPVTAERIAAVPRPATDAAGAPWEE

Specific function: Unknown

COG id: COG4297

COG function: function code S; Uncharacterized protein containing double-stranded beta helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710
- InterPro:   IPR014500 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 16811; Mature: 16811

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRETLKLLMAGWSHPTLPVILHRGLLPPDPDEAEAQVARHGWRALWRDGVFDYDHFHSN
CCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AFEALGVLSGRARLRLGGPEGQPVDVTPGDLLILPPGTGHARMEASEDFLLFGAYPAGQE
HHHHHHHHCCCEEEEECCCCCCEEECCCCCEEEECCCCCCCEEECCCCEEEEECCCCCCC
EWDICRAPADPVTAERIAAVPRPATDAAGAPWEE
CCCEECCCCCCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHRETLKLLMAGWSHPTLPVILHRGLLPPDPDEAEAQVARHGWRALWRDGVFDYDHFHSN
CCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AFEALGVLSGRARLRLGGPEGQPVDVTPGDLLILPPGTGHARMEASEDFLLFGAYPAGQE
HHHHHHHHCCCEEEEECCCCCCEEECCCCCEEEECCCCCCCEEECCCCEEEEECCCCCCC
EWDICRAPADPVTAERIAAVPRPATDAAGAPWEE
CCCEECCCCCCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]