| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465320
Identifier: 77465320
GI number: 77465320
Start: 377984
End: 378628
Strand: Reverse
Name: 77465320
Synonym: RSP_3317
Alternate gene names: NA
Gene position: 378628-377984 (Counterclockwise)
Preceding gene: 77465321
Following gene: 77465318
Centisome position: 40.15
GC content: 71.63
Gene sequence:
>645_bases ATGACCGAGGAGAAACCGAAGATCGGCAGGCCGCCGGTGCTGAGCTGTGCCGAGCGGACCTGCCAGATCCTGCGGGCGGC CGAACAGGTCTTCGTCTGCCACGGCTATTCGGGGACGACGATGGACCGGATCGCCTGCGCGGCCGGCATGTCGAAGCGGA CGCTCTACCAGCATTTCCCCGACAAGCTCGCGGTGCTGCAGGGGATCCTGCGCGCCTACGACGCCGGGCCGCTGATGGAG AGCCTCACCGATCCCGATCCGCCGGGCAGCGCGCGCGAGATCCTGCATCGCTCGCTCGTCGAGATCCTCCGGTTTCTCCT GTGCCCGGCGCAGGTGGCGCTGACGCGTCTCGCCGTGTCCGAGGCCACGGCCGCGCCCGAGGTGGCGCGGCTCTTCTATG ACAATGCGATGGGCGGGCTCAGCGCGGCCTTCACCCGCCGCATCGCCGGGCTGGCCGCGCAGGGGCGCATCCGCTGCAGC GATGCCGACTGGCTCGGCTCGAGCCTCGTGGGCTGCGCGCTGAACCGCCAGCTCCTGCGCCGCCTGACCCACCCCGAAGC GGGGCCGCCCGACGTGGCCGAGCTCGAACGCCGGGTCTCGGCGCTCCTCGACCTCGTCGGGCCGTCTCTCGGCTTCGCGG ACTGA
Upstream 100 bases:
>100_bases CGTACCTGTGTTCTTTGTTCTGGTGAACAGCCTCTTCCGTCGCCGCAAGACCGCTCCTGCGGCCGCGACGGCCTGAGGTG CCCGGCAGAGGACACGCAGC
Downstream 100 bases:
>100_bases GGGAGCCTGTGGCAGAGAGGGCGCGGACTGCCGGTGCATTCATCTCGGCCAATATCGAGCAGGACCGGTAGAGGCGCGTG AGGATCGATCCGACGAGCGA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTEEKPKIGRPPVLSCAERTCQILRAAEQVFVCHGYSGTTMDRIACAAGMSKRTLYQHFPDKLAVLQGILRAYDAGPLME SLTDPDPPGSAREILHRSLVEILRFLLCPAQVALTRLAVSEATAAPEVARLFYDNAMGGLSAAFTRRIAGLAAQGRIRCS DADWLGSSLVGCALNRQLLRRLTHPEAGPPDVAELERRVSALLDLVGPSLGFAD
Sequences:
>Translated_214_residues MTEEKPKIGRPPVLSCAERTCQILRAAEQVFVCHGYSGTTMDRIACAAGMSKRTLYQHFPDKLAVLQGILRAYDAGPLME SLTDPDPPGSAREILHRSLVEILRFLLCPAQVALTRLAVSEATAAPEVARLFYDNAMGGLSAAFTRRIAGLAAQGRIRCS DADWLGSSLVGCALNRQLLRRLTHPEAGPPDVAELERRVSALLDLVGPSLGFAD >Mature_213_residues TEEKPKIGRPPVLSCAERTCQILRAAEQVFVCHGYSGTTMDRIACAAGMSKRTLYQHFPDKLAVLQGILRAYDAGPLMES LTDPDPPGSAREILHRSLVEILRFLLCPAQVALTRLAVSEATAAPEVARLFYDNAMGGLSAAFTRRIAGLAAQGRIRCSD ADWLGSSLVGCALNRQLLRRLTHPEAGPPDVAELERRVSALLDLVGPSLGFAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23097; Mature: 22966
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEKPKIGRPPVLSCAERTCQILRAAEQVFVCHGYSGTTMDRIACAAGMSKRTLYQHFP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCH DKLAVLQGILRAYDAGPLMESLTDPDPPGSAREILHRSLVEILRFLLCPAQVALTRLAVS HHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH EATAAPEVARLFYDNAMGGLSAAFTRRIAGLAAQGRIRCSDADWLGSSLVGCALNRQLLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHH RLTHPEAGPPDVAELERRVSALLDLVGPSLGFAD HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TEEKPKIGRPPVLSCAERTCQILRAAEQVFVCHGYSGTTMDRIACAAGMSKRTLYQHFP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCH DKLAVLQGILRAYDAGPLMESLTDPDPPGSAREILHRSLVEILRFLLCPAQVALTRLAVS HHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH EATAAPEVARLFYDNAMGGLSAAFTRRIAGLAAQGRIRCSDADWLGSSLVGCALNRQLLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHH RLTHPEAGPPDVAELERRVSALLDLVGPSLGFAD HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA