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The map label for this gene is dppC [H]

Identifier: 77465257

GI number: 77465257

Start: 308129

End: 308956

Strand: Reverse

Name: dppC [H]

Synonym: RSP_3250

Alternate gene names: 77465257

Gene position: 308956-308129 (Counterclockwise)

Preceding gene: 77465258

Following gene: 77465256

Centisome position: 32.76

GC content: 68.24

Gene sequence:

>828_bases
GTGATCGCCGCGCTCGGCCTGCCCGTCCGCCGCCGCCCGATGCTGGCCATCGGGACCGCGCTCCTTCTGGCCTTCCTCCT
CGCGGCGCTGCTCGCGCCCTGGATCGCGCCCTTCGATCCGATCGCACAGGACGGATCGATCCGCCTGCAGCCGCCGAGCC
TCGCCCATCCGTTCGGCACCGACAATTTCGGCCGCGACGTGCTCTCGCGGGTGATCTGGGGCGCCCGGATCGATCTGCAG
ATCGCAGTGCTGGGGGTGCTCTTTCCCTTCCTGATCGGCACGGCCGTGGGCACGCTCGCGGGCTTCTTCGGCGGCTGGAT
CGACGCGCTCTTCATGCGCCTGATCGACGTGATCCTGGCCTTCCCCTTCCTCGTCCTGATGCTCTCGATCATCGCGATCC
TCGGGCCCGGGCTCACCAGCTTCTACATCGCCATGGCGCTGGTGGGCTGGGTCTCCTATGCGCGGCTGATCCGGGCGCAG
ATCCTCGTGCTCAAGACGCAGGATTTCGCGGTGGCGGCCCAGAGCCTCGGCTTCTCGCGCACCCGGATCATGTTCCGCCA
TCTGCTGCCCAATGCGCTGGCGGGCTCGCTCGTCTTCGTCATGTCGGACGCGGTGCTCGTGCTGCTCAATGGCGCGGCGA
TCAGCTACCTCGGGCTCGGGGTGCAGCCCCCGCTCGCGGAATGGGGGGTCATGGTGGCGGAGGGTCAGGCCTTCATCACC
ACCGCCTGGTGGATCACCCTGTTCCCGGGCCTCGCCATCGTCACACTGGCCTTCGGCTTCAGCCTGCTGGGCGACGCGCT
CGGCGATCTTCTGGGGGTGAAGGAATGA

Upstream 100 bases:

>100_bases
TGGTGGTGCAGGGCGTGGCCATGACCTTCGCGGTCGCCACGGTTCTGGTGAACTTCCTGGCCGACATCGTGACGGTCGCC
CTCGACCCGCGGGTGAAGCT

Downstream 100 bases:

>100_bases
GCCTGCTTGCCATCCGCGACCTCGAGATCCGCTTCCGCGACGGCACCGAGGAACGGCTTCTCATCGACCGGGTCTCGCTC
GAGCTGAAGAAGGGCGAGAT

Product: ABC peptide transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MIAALGLPVRRRPMLAIGTALLLAFLLAALLAPWIAPFDPIAQDGSIRLQPPSLAHPFGTDNFGRDVLSRVIWGARIDLQ
IAVLGVLFPFLIGTAVGTLAGFFGGWIDALFMRLIDVILAFPFLVLMLSIIAILGPGLTSFYIAMALVGWVSYARLIRAQ
ILVLKTQDFAVAAQSLGFSRTRIMFRHLLPNALAGSLVFVMSDAVLVLLNGAAISYLGLGVQPPLAEWGVMVAEGQAFIT
TAWWITLFPGLAIVTLAFGFSLLGDALGDLLGVKE

Sequences:

>Translated_275_residues
MIAALGLPVRRRPMLAIGTALLLAFLLAALLAPWIAPFDPIAQDGSIRLQPPSLAHPFGTDNFGRDVLSRVIWGARIDLQ
IAVLGVLFPFLIGTAVGTLAGFFGGWIDALFMRLIDVILAFPFLVLMLSIIAILGPGLTSFYIAMALVGWVSYARLIRAQ
ILVLKTQDFAVAAQSLGFSRTRIMFRHLLPNALAGSLVFVMSDAVLVLLNGAAISYLGLGVQPPLAEWGVMVAEGQAFIT
TAWWITLFPGLAIVTLAFGFSLLGDALGDLLGVKE
>Mature_275_residues
MIAALGLPVRRRPMLAIGTALLLAFLLAALLAPWIAPFDPIAQDGSIRLQPPSLAHPFGTDNFGRDVLSRVIWGARIDLQ
IAVLGVLFPFLIGTAVGTLAGFFGGWIDALFMRLIDVILAFPFLVLMLSIIAILGPGLTSFYIAMALVGWVSYARLIRAQ
ILVLKTQDFAVAAQSLGFSRTRIMFRHLLPNALAGSLVFVMSDAVLVLLNGAAISYLGLGVQPPLAEWGVMVAEGQAFIT
TAWWITLFPGLAIVTLAFGFSLLGDALGDLLGVKE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=266, Percent_Identity=40.9774436090226, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1787760, Length=266, Percent_Identity=39.0977443609023, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1789964, Length=255, Percent_Identity=40.3921568627451, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=36.25, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1787498, Length=273, Percent_Identity=35.1648351648352, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1787549, Length=240, Percent_Identity=31.25, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1788505, Length=209, Percent_Identity=30.622009569378, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29400; Mature: 29400

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAALGLPVRRRPMLAIGTALLLAFLLAALLAPWIAPFDPIAQDGSIRLQPPSLAHPFGT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCC
DNFGRDVLSRVIWGARIDLQIAVLGVLFPFLIGTAVGTLAGFFGGWIDALFMRLIDVILA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPFLVLMLSIIAILGPGLTSFYIAMALVGWVSYARLIRAQILVLKTQDFAVAAQSLGFSR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCHH
TRIMFRHLLPNALAGSLVFVMSDAVLVLLNGAAISYLGLGVQPPLAEWGVMVAEGQAFIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHCEEEECCCCHHH
TAWWITLFPGLAIVTLAFGFSLLGDALGDLLGVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIAALGLPVRRRPMLAIGTALLLAFLLAALLAPWIAPFDPIAQDGSIRLQPPSLAHPFGT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCC
DNFGRDVLSRVIWGARIDLQIAVLGVLFPFLIGTAVGTLAGFFGGWIDALFMRLIDVILA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPFLVLMLSIIAILGPGLTSFYIAMALVGWVSYARLIRAQILVLKTQDFAVAAQSLGFSR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCHH
TRIMFRHLLPNALAGSLVFVMSDAVLVLLNGAAISYLGLGVQPPLAEWGVMVAEGQAFIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHCEEEECCCCHHH
TAWWITLFPGLAIVTLAFGFSLLGDALGDLLGVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]