| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
Click here to switch to the map view.
The map label for this gene is 77465228
Identifier: 77465228
GI number: 77465228
Start: 268030
End: 269157
Strand: Reverse
Name: 77465228
Synonym: RSP_3213
Alternate gene names: NA
Gene position: 269157-268030 (Counterclockwise)
Preceding gene: 77465229
Following gene: 77465227
Centisome position: 28.54
GC content: 71.63
Gene sequence:
>1128_bases ATGTCCGAAGCGCACGGCAGCAGGGACACGGGATTGGCACTGGGCGGAGGCGGTCCACCCGCGGGACCGGCCCCCACCCA TCTCCTCACGATGGCGCGCGGGGTGGCCGAGGCCATTCCCCAGCGGCTGCTGCCCGCCCTCCGCGCCATGGGCATCACCA CCTGCGTCCTGCCGGGCCGCGGGCTCGGCCTGACGTTCGAGGGGCCGGTTCCCGCCTTCCTCTCGTCCGATCCGTTCCGT CTGGCCGAACTGTCCCTGCCCGAGCCGGTTGCCGAGCCTCCTGCGCCAGCCGAGGAGTCCCCGCCGGAAGAGCCCGCTCC GGTCGAACCTGAGGAGCCCGTCGATCCCGAAGCCGCCTGCTCATCGGCAGAGGAGACGCCTGCGGATGAGGTCGAAGCCG GCGCTCCCGAACCCCGGGCCGAGGATCCGGAACAGCCGTCCCTCGAAGCCCCGGAACCCGAGAGCGTGCCCGATGCACCC TCGGGCGCGTGGGCCGAGCGGCTTGCCGCGATCGAGACGGCCGTGACGGCCGTCACCGAGGCTCTCGCGACACAGGCTCA GGCACAAGCAGACCTGTCGGCCCAGGGCGCACGGCTGGAACAGCTGGTGACGGCCCTCGGCAACCGGCCCCTGCCGCCGC TCAATCTGACCGCGCAGCACAAGAGTTTCGCCGCCTTCGGCACCGCCATGGCCTCCTTCATGAGCCGCATGGAGGCCTTC CTCGAGCGGGAAGAGCAAACCCGCGCCCGGTTCCTGTCCGAGGTGAGCGACCTGCTGCGCAGCGCCACCGGCCCCGCCTC CTCCGACGGCTCGGGCAGCGTGGAACTGGATGCCATGTCGCGCGCGCTGGCCGCCGTGACGGAGGAACTGAGCCAGACCC GCGCCGCGCCGCAACTGGGCGAGCTGATGACGACCATCGGCGCCCTCACGCAATATCAGGAGCGCATCCTCGCCCTCCTC ATGCGGCATGACGAGGTTCCGGACACCCGGATGCAGGCCGCGCAGGAGCAGTTCCTCCGCGACATCCGCGTGGTGATCGC GGAACTGCTGGCAGAGAACCGGAGGGCCGCCCTCTCCGGCACCACCGCGGGCCCGGGCGAGTCCCTTCGCCGCTTTCAGG AGGGCTGA
Upstream 100 bases:
>100_bases GTGGCGACGGCTCATGGTGCGCCGTCTTTGCACCGGATCTGGAAAGGCTTTCTCAACCCTCGGCCGCTACAAGAAGGCGG GATCGGTCAGGGAGACGCGC
Downstream 100 bases:
>100_bases GGATCCCGATAAACGCGAGGAGATTGCTCCCGCTATGGGCGCATCCCGCTGCCCCGACTGTCCGGCCGATGCGGAAGCCT CCCGCCGATGCTGTGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSEAHGSRDTGLALGGGGPPAGPAPTHLLTMARGVAEAIPQRLLPALRAMGITTCVLPGRGLGLTFEGPVPAFLSSDPFR LAELSLPEPVAEPPAPAEESPPEEPAPVEPEEPVDPEAACSSAEETPADEVEAGAPEPRAEDPEQPSLEAPEPESVPDAP SGAWAERLAAIETAVTAVTEALATQAQAQADLSAQGARLEQLVTALGNRPLPPLNLTAQHKSFAAFGTAMASFMSRMEAF LEREEQTRARFLSEVSDLLRSATGPASSDGSGSVELDAMSRALAAVTEELSQTRAAPQLGELMTTIGALTQYQERILALL MRHDEVPDTRMQAAQEQFLRDIRVVIAELLAENRRAALSGTTAGPGESLRRFQEG
Sequences:
>Translated_375_residues MSEAHGSRDTGLALGGGGPPAGPAPTHLLTMARGVAEAIPQRLLPALRAMGITTCVLPGRGLGLTFEGPVPAFLSSDPFR LAELSLPEPVAEPPAPAEESPPEEPAPVEPEEPVDPEAACSSAEETPADEVEAGAPEPRAEDPEQPSLEAPEPESVPDAP SGAWAERLAAIETAVTAVTEALATQAQAQADLSAQGARLEQLVTALGNRPLPPLNLTAQHKSFAAFGTAMASFMSRMEAF LEREEQTRARFLSEVSDLLRSATGPASSDGSGSVELDAMSRALAAVTEELSQTRAAPQLGELMTTIGALTQYQERILALL MRHDEVPDTRMQAAQEQFLRDIRVVIAELLAENRRAALSGTTAGPGESLRRFQEG >Mature_374_residues SEAHGSRDTGLALGGGGPPAGPAPTHLLTMARGVAEAIPQRLLPALRAMGITTCVLPGRGLGLTFEGPVPAFLSSDPFRL AELSLPEPVAEPPAPAEESPPEEPAPVEPEEPVDPEAACSSAEETPADEVEAGAPEPRAEDPEQPSLEAPEPESVPDAPS GAWAERLAAIETAVTAVTEALATQAQAQADLSAQGARLEQLVTALGNRPLPPLNLTAQHKSFAAFGTAMASFMSRMEAFL EREEQTRARFLSEVSDLLRSATGPASSDGSGSVELDAMSRALAAVTEELSQTRAAPQLGELMTTIGALTQYQERILALLM RHDEVPDTRMQAAQEQFLRDIRVVIAELLAENRRAALSGTTAGPGESLRRFQEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39351; Mature: 39220
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAHGSRDTGLALGGGGPPAGPAPTHLLTMARGVAEAIPQRLLPALRAMGITTCVLPGR CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCC GLGLTFEGPVPAFLSSDPFRLAELSLPEPVAEPPAPAEESPPEEPAPVEPEEPVDPEAAC CCCEEECCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SSAEETPADEVEAGAPEPRAEDPEQPSLEAPEPESVPDAPSGAWAERLAAIETAVTAVTE CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALATQAQAQADLSAQGARLEQLVTALGNRPLPPLNLTAQHKSFAAFGTAMASFMSRMEAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LEREEQTRARFLSEVSDLLRSATGPASSDGSGSVELDAMSRALAAVTEELSQTRAAPQLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHH ELMTTIGALTQYQERILALLMRHDEVPDTRMQAAQEQFLRDIRVVIAELLAENRRAALSG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC TTAGPGESLRRFQEG CCCCCHHHHHHHHCC >Mature Secondary Structure SEAHGSRDTGLALGGGGPPAGPAPTHLLTMARGVAEAIPQRLLPALRAMGITTCVLPGR CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCC GLGLTFEGPVPAFLSSDPFRLAELSLPEPVAEPPAPAEESPPEEPAPVEPEEPVDPEAAC CCCEEECCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SSAEETPADEVEAGAPEPRAEDPEQPSLEAPEPESVPDAPSGAWAERLAAIETAVTAVTE CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALATQAQAQADLSAQGARLEQLVTALGNRPLPPLNLTAQHKSFAAFGTAMASFMSRMEAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LEREEQTRARFLSEVSDLLRSATGPASSDGSGSVELDAMSRALAAVTEELSQTRAAPQLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHH ELMTTIGALTQYQERILALLMRHDEVPDTRMQAAQEQFLRDIRVVIAELLAENRRAALSG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC TTAGPGESLRRFQEG CCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA