| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yeeJ [C]
Identifier: 77461963
GI number: 77461963
Start: 2771021
End: 2772544
Strand: Direct
Name: yeeJ [C]
Synonym: Pfl01_2415
Alternate gene names: 77461963
Gene position: 2771021-2772544 (Clockwise)
Preceding gene: 77458640
Following gene: 77458644
Centisome position: 43.04
GC content: 54.72
Gene sequence:
>1524_bases ATGAAACGGTGTCTTATCTATATAGCTTGTCTATTGCTGGTGGCTTGTGCCAGACCGGCGATCGATGGATTCTCGGGTTC TCAAGTATCCGCGTTCGAAATACAAGGTGCAGCGGTGGCGACGGCTCTGGCCGCTCGTTACGCCGATACCCGTCGTGATT GCGGAGGTTCCTCGAAACCTGCGTTTCTGTGTTCCGGGATACTGTTTCGCGGCACGATCCACTCGACGCAGTATCACTTC TGGAATCCAAGTCCGATTGCCGTGCAAAAGGGGGCGTTATCGTTTTCATACCTGCGTCAGGACTCACAGTATCGACAGAT CGATTCGACTTATGATCACGGATTCATCTTTTACCCCATCCTGGGGATGCCAGAGGGCAAGCGTCACATCGAAATTCTGT GTGTGTTTCCAATCGATGGTGCCTCATTCGATCGGGACAACCCTGGTTGTGGCGCTCATCGTTCTTATCCGCAGCAGAGC AGGCGCTGCCAGTCTCAAGGCATTACCACCGCCGAGCAATGGCTGGCCCATACTGCACAGCCAGGTGTCGCCCAGAGTTA CTATCAATGCAGTTTTGATGTTCGCGACCAGATGAACGACGCTGCAGCCGATTCGTTCTATCAAGCCATTCGTGCGATGG CGCTGCACCGGGATGTCGCTTTCCATAGCCGAAACGAACTCATGCTGACGACATGGCCGCAGAACATCCCTGCAGAGTTG CCTATCCAGGCGTTGTACTACACGGGAAATGGATTGAAGTCGGCTCAGTATGACCAGCAGGATTTTTATGGGCAAAGTGG ATTGATCCTGCCAATCATACGAATTGACCTGCCGGCGACACCGGCACATCTGGCGAGATTTACGTTCGATCCGAGAGATC AGGTGTTCGATGAGCAAAGTCGAACGCTGCGAGTCAGTTCACTTACTGCTTCTCCGCAGGCCGATGCATTCACGTTTGCA GCAGACAGCGGATTCCCTCGCACTGGATTCAGTGGTGCTCGTTTTCGGCTGAATGTGAGCGGTGGAAAGGCGCCCTACAC CTTCGCCAGCAGTGACCAGGCACAGGCAACGATAACCCTGGGCACCGGTGACGCCACCATGAAAGGTCATGCTCAGGTCG TGTTCACCATCAGGGACGCCAGCAATCAGATTGCGTACTACACGATGGCCAAGGCGAAACTCTGGTTTACCGCCTTGGCT TGCCATATGAATTGGGTGGCGGCCAACAGCTTTTCAAACAGTCATGGTGTTGTATTGCCTCAGCTTCAGGAACTGAATGG TGGTTATCTCCTGAGATATCCGGGAGCGTTGTATGCCGAATGGGGAGACATGGTGCGTGGCTACGCCTGGCCGAGAGGGG CGTACGATGTCACCAACAATTATGACCCCAGCATTCCCGAGTACTGGACTGCGCAGGCTGCTACGCCTGGCAATTACTAC ACCGGGGCGGTGACGTTGGGGTATCCCCACCAACGTCCGGCGGGGTGGAAACTTTGTTCTGTGGCGGTGTCCCGGGTACC TTGA
Upstream 100 bases:
>100_bases AGCGCAATTTGCCGTCGGTCGAGACTGTAATTTCTGACAGTGGTCATCGCTAGGGATGCCGGTATTTGATGGCGTTCAGG CGCTGACTGCTGGAGGAACG
Downstream 100 bases:
>100_bases GTAGAGGGGCCTCGCCAACGTCAGGTCGCAGTTTACTTGCGCGAATGGTGCCGTTGTGGACGTGGCTGCTGGAAATCGCT AAAGACTTTTGGAGCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKRCLIYIACLLLVACARPAIDGFSGSQVSAFEIQGAAVATALAARYADTRRDCGGSSKPAFLCSGILFRGTIHSTQYHF WNPSPIAVQKGALSFSYLRQDSQYRQIDSTYDHGFIFYPILGMPEGKRHIEILCVFPIDGASFDRDNPGCGAHRSYPQQS RRCQSQGITTAEQWLAHTAQPGVAQSYYQCSFDVRDQMNDAAADSFYQAIRAMALHRDVAFHSRNELMLTTWPQNIPAEL PIQALYYTGNGLKSAQYDQQDFYGQSGLILPIIRIDLPATPAHLARFTFDPRDQVFDEQSRTLRVSSLTASPQADAFTFA ADSGFPRTGFSGARFRLNVSGGKAPYTFASSDQAQATITLGTGDATMKGHAQVVFTIRDASNQIAYYTMAKAKLWFTALA CHMNWVAANSFSNSHGVVLPQLQELNGGYLLRYPGALYAEWGDMVRGYAWPRGAYDVTNNYDPSIPEYWTAQAATPGNYY TGAVTLGYPHQRPAGWKLCSVAVSRVP
Sequences:
>Translated_507_residues MKRCLIYIACLLLVACARPAIDGFSGSQVSAFEIQGAAVATALAARYADTRRDCGGSSKPAFLCSGILFRGTIHSTQYHF WNPSPIAVQKGALSFSYLRQDSQYRQIDSTYDHGFIFYPILGMPEGKRHIEILCVFPIDGASFDRDNPGCGAHRSYPQQS RRCQSQGITTAEQWLAHTAQPGVAQSYYQCSFDVRDQMNDAAADSFYQAIRAMALHRDVAFHSRNELMLTTWPQNIPAEL PIQALYYTGNGLKSAQYDQQDFYGQSGLILPIIRIDLPATPAHLARFTFDPRDQVFDEQSRTLRVSSLTASPQADAFTFA ADSGFPRTGFSGARFRLNVSGGKAPYTFASSDQAQATITLGTGDATMKGHAQVVFTIRDASNQIAYYTMAKAKLWFTALA CHMNWVAANSFSNSHGVVLPQLQELNGGYLLRYPGALYAEWGDMVRGYAWPRGAYDVTNNYDPSIPEYWTAQAATPGNYY TGAVTLGYPHQRPAGWKLCSVAVSRVP >Mature_507_residues MKRCLIYIACLLLVACARPAIDGFSGSQVSAFEIQGAAVATALAARYADTRRDCGGSSKPAFLCSGILFRGTIHSTQYHF WNPSPIAVQKGALSFSYLRQDSQYRQIDSTYDHGFIFYPILGMPEGKRHIEILCVFPIDGASFDRDNPGCGAHRSYPQQS RRCQSQGITTAEQWLAHTAQPGVAQSYYQCSFDVRDQMNDAAADSFYQAIRAMALHRDVAFHSRNELMLTTWPQNIPAEL PIQALYYTGNGLKSAQYDQQDFYGQSGLILPIIRIDLPATPAHLARFTFDPRDQVFDEQSRTLRVSSLTASPQADAFTFA ADSGFPRTGFSGARFRLNVSGGKAPYTFASSDQAQATITLGTGDATMKGHAQVVFTIRDASNQIAYYTMAKAKLWFTALA CHMNWVAANSFSNSHGVVLPQLQELNGGYLLRYPGALYAEWGDMVRGYAWPRGAYDVTNNYDPSIPEYWTAQAATPGNYY TGAVTLGYPHQRPAGWKLCSVAVSRVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55909; Mature: 55909
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCLIYIACLLLVACARPAIDGFSGSQVSAFEIQGAAVATALAARYADTRRDCGGSSKP CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC AFLCSGILFRGTIHSTQYHFWNPSPIAVQKGALSFSYLRQDSQYRQIDSTYDHGFIFYPI HHHHCCEEEECEEECCEEEEECCCCCEEECCCCCHHHHHCCCHHHHHCCCCCCCEEEEEE LGMPEGKRHIEILCVFPIDGASFDRDNPGCGAHRSYPQQSRRCQSQGITTAEQWLAHTAQ CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCC PGVAQSYYQCSFDVRDQMNDAAADSFYQAIRAMALHRDVAFHSRNELMLTTWPQNIPAEL CCCCCHHEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC PIQALYYTGNGLKSAQYDQQDFYGQSGLILPIIRIDLPATPAHLARFTFDPRDQVFDEQS CEEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCHHHHHEEECCCHHHHHCCCC RTLRVSSLTASPQADAFTFAADSGFPRTGFSGARFRLNVSGGKAPYTFASSDQAQATITL CEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCEEEEEE GTGDATMKGHAQVVFTIRDASNQIAYYTMAKAKLWFTALACHMNWVAANSFSNSHGVVLP ECCCCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCEEEC QLQELNGGYLLRYPGALYAEWGDMVRGYAWPRGAYDVTNNYDPSIPEYWTAQAATPGNYY HHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE TGAVTLGYPHQRPAGWKLCSVAVSRVP EEEEEECCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKRCLIYIACLLLVACARPAIDGFSGSQVSAFEIQGAAVATALAARYADTRRDCGGSSKP CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC AFLCSGILFRGTIHSTQYHFWNPSPIAVQKGALSFSYLRQDSQYRQIDSTYDHGFIFYPI HHHHCCEEEECEEECCEEEEECCCCCEEECCCCCHHHHHCCCHHHHHCCCCCCCEEEEEE LGMPEGKRHIEILCVFPIDGASFDRDNPGCGAHRSYPQQSRRCQSQGITTAEQWLAHTAQ CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCC PGVAQSYYQCSFDVRDQMNDAAADSFYQAIRAMALHRDVAFHSRNELMLTTWPQNIPAEL CCCCCHHEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC PIQALYYTGNGLKSAQYDQQDFYGQSGLILPIIRIDLPATPAHLARFTFDPRDQVFDEQS CEEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCHHHHHEEECCCHHHHHCCCC RTLRVSSLTASPQADAFTFAADSGFPRTGFSGARFRLNVSGGKAPYTFASSDQAQATITL CEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCEEEEEE GTGDATMKGHAQVVFTIRDASNQIAYYTMAKAKLWFTALACHMNWVAANSFSNSHGVVLP ECCCCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCEEEC QLQELNGGYLLRYPGALYAEWGDMVRGYAWPRGAYDVTNNYDPSIPEYWTAQAATPGNYY HHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE TGAVTLGYPHQRPAGWKLCSVAVSRVP EEEEEECCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA