| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is phoU [H]
Identifier: 77461832
GI number: 77461832
Start: 6283699
End: 6284460
Strand: Reverse
Name: phoU [H]
Synonym: Pfl01_5611
Alternate gene names: 77461832
Gene position: 6284460-6283699 (Counterclockwise)
Preceding gene: 77461833
Following gene: 77461831
Centisome position: 97.61
GC content: 60.24
Gene sequence:
>762_bases ATGATTAGTAAAGAAGGCCTTACCCATCACATTTCCGCGCAGTTCAACGCCGAACTGGAAGAAGTGCGCAGCCACCTGCT GGCCATGGGCGGGCTGGTCGAGAAGCAGGTCAATGACGCGGTCACCGCGCTGATCGAGGCCGACTCGGGCCTGGCCCAGC AAGTGCGTGAGATCGACGACCAGATCAACCAGATGGAACGCAACATCGACGAAGAATGCCTGCGCATTCTGGCCCGTCGT CAGCCTGCGGCCTCCGACCTGCGTCTGATCATCAGCATCTCCAAGTCGGTGATCGACCTTGAGCGCATCGGCGACGAAGC GACCAAGATCGCCCGCCGCGCGATTCAGCTGTGCGAAGAAGGCGAAGCGCCGCGCGGTTACGTCGAAGTGCGCCACATCG GTGACCAGGTGCGCAACATGGTGCGCGATGCGCTGGACGCGTTTGCCCGCTTCGACGCCGATCTGGCGTTGTCGGTGGCG CAGTACGACAAGATCATCGACCGCGAATACAAAACCGCTCTGCGCGAACTGGCGACCTACATGATGGAAGACCCGCGCTC TATCTCGCGGGTCTTGAGCATTATCTGGGTGCTGCGTTCGCTGGAGCGGATCGGCGACCACGCCCGCAACATCTCTGAGC TGGTGATCTATCTGGTGCGCGGCACCGATGTGCGCCACATGGGCCTCAAGCGCATGAAGGAAGAAGTTGAAGGGACAAGT GGTGAAACCGCTAATGTTCCGGGCGATGCTGACGATAAGTAA
Upstream 100 bases:
>100_bases AGGACTACATCACCGGTCGTTACGGCTGACAGTTGCGGGTTATTCACAGAATTGACGCTGCGGCCCGCCGCACCTTACCG GACGCTCCAAGGACGCCAAC
Downstream 100 bases:
>100_bases GATTGCCTGAGAAAAGCGCCCGGCCCTTTGGCCGGGCGTTTTTGTTTCTGCTTTTCATAGGCAGAACCGAATTAAAAAGC AGCACCCGCGAACGAAAAGT
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MISKEGLTHHISAQFNAELEEVRSHLLAMGGLVEKQVNDAVTALIEADSGLAQQVREIDDQINQMERNIDEECLRILARR QPAASDLRLIISISKSVIDLERIGDEATKIARRAIQLCEEGEAPRGYVEVRHIGDQVRNMVRDALDAFARFDADLALSVA QYDKIIDREYKTALRELATYMMEDPRSISRVLSIIWVLRSLERIGDHARNISELVIYLVRGTDVRHMGLKRMKEEVEGTS GETANVPGDADDK
Sequences:
>Translated_253_residues MISKEGLTHHISAQFNAELEEVRSHLLAMGGLVEKQVNDAVTALIEADSGLAQQVREIDDQINQMERNIDEECLRILARR QPAASDLRLIISISKSVIDLERIGDEATKIARRAIQLCEEGEAPRGYVEVRHIGDQVRNMVRDALDAFARFDADLALSVA QYDKIIDREYKTALRELATYMMEDPRSISRVLSIIWVLRSLERIGDHARNISELVIYLVRGTDVRHMGLKRMKEEVEGTS GETANVPGDADDK >Mature_253_residues MISKEGLTHHISAQFNAELEEVRSHLLAMGGLVEKQVNDAVTALIEADSGLAQQVREIDDQINQMERNIDEECLRILARR QPAASDLRLIISISKSVIDLERIGDEATKIARRAIQLCEEGEAPRGYVEVRHIGDQVRNMVRDALDAFARFDADLALSVA QYDKIIDREYKTALRELATYMMEDPRSISRVLSIIWVLRSLERIGDHARNISELVIYLVRGTDVRHMGLKRMKEEVEGTS GETANVPGDADDK
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=223, Percent_Identity=49.3273542600897, Blast_Score=223, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 28506; Mature: 28506
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKEGLTHHISAQFNAELEEVRSHLLAMGGLVEKQVNDAVTALIEADSGLAQQVREIDD CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QINQMERNIDEECLRILARRQPAASDLRLIISISKSVIDLERIGDEATKIARRAIQLCEE HHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC GEAPRGYVEVRHIGDQVRNMVRDALDAFARFDADLALSVAQYDKIIDREYKTALRELATY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMEDPRSISRVLSIIWVLRSLERIGDHARNISELVIYLVRGTDVRHMGLKRMKEEVEGTS HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC GETANVPGDADDK CCCCCCCCCCCCC >Mature Secondary Structure MISKEGLTHHISAQFNAELEEVRSHLLAMGGLVEKQVNDAVTALIEADSGLAQQVREIDD CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QINQMERNIDEECLRILARRQPAASDLRLIISISKSVIDLERIGDEATKIARRAIQLCEE HHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC GEAPRGYVEVRHIGDQVRNMVRDALDAFARFDADLALSVAQYDKIIDREYKTALRELATY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMEDPRSISRVLSIIWVLRSLERIGDHARNISELVIYLVRGTDVRHMGLKRMKEEVEGTS HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC GETANVPGDADDK CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA