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The map label for this gene is 77461799

Identifier: 77461799

GI number: 77461799

Start: 6249898

End: 6250773

Strand: Reverse

Name: 77461799

Synonym: Pfl01_5578

Alternate gene names: NA

Gene position: 6250773-6249898 (Counterclockwise)

Preceding gene: 77461800

Following gene: 77461798

Centisome position: 97.09

GC content: 63.47

Gene sequence:

>876_bases
ATGATCAAGGACATGGAACACAACCAGGACGACAAAACCGTCCTGCTCGACCGTCAGGGCCATGGCCCTGCGGCGAGTCC
GCTGACCGACTTCGCCGCGCCGCCGCGCTTCGAACAACTGGAAGAACGGATGATCTACGCCGCGCGCCTGCGCCCGGCGG
AGGCCTTCAATATCAGCCTCAATTCGCTGGTGGCCGCGTCGTCCGAACTGCTGTCGGAAGTGGTGCGCCTCAAACACAGC
GAAACCCGCGAAGACCTCTACGCGCTCAACGAGCGCCTGACCGCCGGGCTCAAGCTGTTTGAAGTGCGCGCCCTGCACAA
CGGCGCCGAAAGCAGCCAGGTGATGGCCGCCCGTTACGTGCTCTGCACCGTGGTCGACGAAGCCGTCGTGACCACGCCGT
GGGGCAACGAGAGCGAGTGGTCGCAGATGAGCCTGCTCAGCAGCTTCCACAACGAAACCTTCGGTGGCGAGAAGTTCTTC
CAGCTGCTCGATCGGCTGTCGAAAAACCCGGTCAAGCACCTGCCGATGCTGGAGCTGATGTACCTGTGCCTGTCCCTCGG
TTTCGAGGGCAAGTACCGCGTGCAGGCGCGCGGCATGCTGGAACTCGAAGGCATCCGCGACGCCCTGTACCGGCAGATCC
GTCAGTTGCGTGGCGATGTGCCGCGCGAATTGTCGCCGCAGTGGGAAGGCCTCAACGATCAGCGCCGCAATCTGGTGCGC
ATCGTGCCGGCGTGGATGGTGGTGCTGTTCACTTTCGTCTGTCTGGTGATGATGTATTCGGGCTTCGCCTGGGTCTTGGG
CGAGCAGCGCGACACCGTTCTGCAACCTTATCAGCCGCTTGATCCGGCCGCGGCCCAGCCGCAGTCGCAGCCGTAA

Upstream 100 bases:

>100_bases
ACCTGGCACAACTCGAGCGCTCCGGCGGCTTCGCGTTCCATGTGTCCGGCGAATTCGCCGAGCTTGAACTGAAATTCTGG
GCCATCAGGAACTGACCGAC

Downstream 100 bases:

>100_bases
ACAGGGACGTGTGATGAAAAAGTTTTTCAAGAAAGTCGGCGCCTTCCTGCGCCAGACCTGGGTCTGGACCTTGCTGCTGG
TGCTGTTCGTGGCGCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Family Protein; Type VI Secretion System OmpA/MotB Family Protein; OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; Outer Membrane Protein; DotU Family Type IV/VI Secretion System Protein; Type VI Secretion System Core Protein; OmpA/MotB; SciP Protein; Flagellar Motor Rotation Protein MotB; Replication/Virulence Associated Protein; Ompa/Motb Domain Protein; Type IV/VI Secretion System Protein; DotU Family Type IV / VI Secretion System Protein; Outer Membrane Porin Involved In Nitrogen Fixation; Type VI Secretion System Protein ImpK; Aspartyl/Glutamyl-TRNA(Asn/Gln) Amidotransferase Subunit B; OmpA-Family Protein; Type IV / VI Secretion System Protein; Type IV / VI Secretion System Transmembrane Protein; Type VI Secretion; Outer Membrane Protein Ompa/Motb Family; OmpA-Type Porin; OmpA-Like Porin; OmpA/MotB Family Outer Membrane Protein; T6ss U; Flagellar Motor Protein; OmpA/MotB-Family Outer Membrane Protein; Type IV / VI Secretion System Family Protein DotU; Type VI Secretion System VasF

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIKDMEHNQDDKTVLLDRQGHGPAASPLTDFAAPPRFEQLEERMIYAARLRPAEAFNISLNSLVAASSELLSEVVRLKHS
ETREDLYALNERLTAGLKLFEVRALHNGAESSQVMAARYVLCTVVDEAVVTTPWGNESEWSQMSLLSSFHNETFGGEKFF
QLLDRLSKNPVKHLPMLELMYLCLSLGFEGKYRVQARGMLELEGIRDALYRQIRQLRGDVPRELSPQWEGLNDQRRNLVR
IVPAWMVVLFTFVCLVMMYSGFAWVLGEQRDTVLQPYQPLDPAAAQPQSQP

Sequences:

>Translated_291_residues
MIKDMEHNQDDKTVLLDRQGHGPAASPLTDFAAPPRFEQLEERMIYAARLRPAEAFNISLNSLVAASSELLSEVVRLKHS
ETREDLYALNERLTAGLKLFEVRALHNGAESSQVMAARYVLCTVVDEAVVTTPWGNESEWSQMSLLSSFHNETFGGEKFF
QLLDRLSKNPVKHLPMLELMYLCLSLGFEGKYRVQARGMLELEGIRDALYRQIRQLRGDVPRELSPQWEGLNDQRRNLVR
IVPAWMVVLFTFVCLVMMYSGFAWVLGEQRDTVLQPYQPLDPAAAQPQSQP
>Mature_291_residues
MIKDMEHNQDDKTVLLDRQGHGPAASPLTDFAAPPRFEQLEERMIYAARLRPAEAFNISLNSLVAASSELLSEVVRLKHS
ETREDLYALNERLTAGLKLFEVRALHNGAESSQVMAARYVLCTVVDEAVVTTPWGNESEWSQMSLLSSFHNETFGGEKFF
QLLDRLSKNPVKHLPMLELMYLCLSLGFEGKYRVQARGMLELEGIRDALYRQIRQLRGDVPRELSPQWEGLNDQRRNLVR
IVPAWMVVLFTFVCLVMMYSGFAWVLGEQRDTVLQPYQPLDPAAAQPQSQP

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33139; Mature: 33139

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDMEHNQDDKTVLLDRQGHGPAASPLTDFAAPPRFEQLEERMIYAARLRPAEAFNISL
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
NSLVAASSELLSEVVRLKHSETREDLYALNERLTAGLKLFEVRALHNGAESSQVMAARYV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LCTVVDEAVVTTPWGNESEWSQMSLLSSFHNETFGGEKFFQLLDRLSKNPVKHLPMLELM
HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCHHHHH
YLCLSLGFEGKYRVQARGMLELEGIRDALYRQIRQLRGDVPRELSPQWEGLNDQRRNLVR
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
IVPAWMVVLFTFVCLVMMYSGFAWVLGEQRDTVLQPYQPLDPAAAQPQSQP
HHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIKDMEHNQDDKTVLLDRQGHGPAASPLTDFAAPPRFEQLEERMIYAARLRPAEAFNISL
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
NSLVAASSELLSEVVRLKHSETREDLYALNERLTAGLKLFEVRALHNGAESSQVMAARYV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LCTVVDEAVVTTPWGNESEWSQMSLLSSFHNETFGGEKFFQLLDRLSKNPVKHLPMLELM
HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCHHHHH
YLCLSLGFEGKYRVQARGMLELEGIRDALYRQIRQLRGDVPRELSPQWEGLNDQRRNLVR
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
IVPAWMVVLFTFVCLVMMYSGFAWVLGEQRDTVLQPYQPLDPAAAQPQSQP
HHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA